Gene CNC02560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC02560 
Symbol 
ID3256345 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp732042 
End bp735287 
Gene Length3246 bp 
Protein Length807 aa 
Translation table 
GC content47% 
IMG OID638255476 
Productexpressed protein 
Protein accessionXP_569549 
Protein GI58264786 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCTCCACTC CACCTCCCTC ACCCTCATTC CAGCCGCCCT CATGCCCACA GACATCTTTC 
TCGGTCAGTA GTACTTCCCT TTTCTGCCCC TCCCAGCCAC TCTCGTCTTA CCTCCACAGA
TCACAAGCCC TTCCTCTCCG ATTCCTTCGA CGTCCATTCC TACACCAACG CCATCCTCCA
GGGAAGACAA TACACACCTG ACCAGTCTCA GCAGAACAAC AATAAGGAGG ACAATGATAA
AGCCGACCTA GATGTCGGTG CTGAGCTTGC AAGGTTGAAC TATGGCATTG TGCGTTTCCA
CGCTAGACAT TTCGCAATGA TTGAACAATT GACCGGACTT ATAGGAAGAT GTGACAAAGC
AGCTACGGCA GGAGGTAGGT TGCCAGAGTG AAACAAACAG GTGAACCAAC TGCTGTACTG
ATTAACCACC AAACCAGATC ACTGCTTCAC ACCTGCTTCT TCTAAACCAT CTCACAACGT
CACTTTCCCT ATCATCTCAC CTTTCTCCCA TCCGCTCGTC TTTGATATCA TTATCTGCAT
CCATCGACCG ACTACACTCC AAGATCCATA CTCCCTATAC CAATCTTTCA ACCCTTGTAA
GACGACAGCA GAATCTGCGG CAAATTAAAG ACATTGCTCG ACGCGCCAGT CGATTTGTCA
TCGTCGCGCG ACGTCTAGAG AACCAGTTGG AACGAATGGG AAATGCTCCA GAGGAAGACG
GTGAAAAGGG GAAAACTGAA AGGAGAGCAG AGCTTGCCAA AGCCGCCCTT AGTTGCGCAG
AGCTTGACTC CTTGCTAAGG GACGAAAGTA ATGAACGAGG GGACGACACG ACTTCCATAG
CGCTACTGGA TATTGACTTC GTCAAAGCCT ATTCTCCTTT GATAAGCCGA GCTAGGGATA
CGGTGATAGA AGAAATGGAG ACTATGGTCT TTGCTGGGCT GCAGGAACTT GTGCGTCATA
TCTAGCACTT CGTCAAGTGC AAGCTGACCT TAGTCCAGAA CCAGACCGTC TTGTCGTCCG
CTCTTCAAAC CGCACATAAT CTTCGACTTC TACCTGATCT AGTGTCAAAC CTCTTGGACG
ACTTGAATGA CGCTGTAACT TTAAGAGTAA CTAAGGCTTT TGATGTTACA GCAATAGGCA
AAGAAGTCGC TGTTAAAGGT CTGATTTGTC GTCATATGAT CTTGATTCGC GTGCTGATAT
CTCATCCAGT AGATGCAAAT AGCTCTCATG GCACAATCAA ATTTCCTTCT CGAAGCCGGC
CGCCTACCGA ACCAACTTCG AGCACCACTC ATCTTTGGGT CAGCATCCTT TGGAAGAGAC
TCGAACGCGT CATAGATGAT GTGGCCAATT GTTGCATCAA GGTTTATACC CTGGAGAAGG
TTTTGCGAAT TAAAAGGGAT ACCTTAACAC AAGTGGAATT TTTTGACGAA GTAATGAAGG
CAAGTTTGAT GATGCCTTTG GTTTCTTGAC TGCTAATGAC CAATTTCTTT AGAGATTAGA
TGAGAAGCCC AGCTTTACCT ACTGGACCAC TTTAGCAAAG GCTTTTGAGA CGCAAACCAA
AGAAGCGGCG AAAAGTAAGC CGGACTGCCC AATACCAAGC TAATACTCTT CAGCGTCGTC
ATGGTTGCAG CAGGCTCTCA GCGTAGGATA TCCTAGGCTA CTACGACTGT TTCATGATTT
TTTTTCAAGG ATTGCAGTTC ATACAGACAC TGTTTATACC CAGGAACATC AGAGGTAGGC
TAAGTCACAA ATCGAACAGT TGAAACGCCC TAAATATTTG CAGTCCTGAA GCAGTTCTTG
TCCTTCGTTC TATCTCGTCT TTCGAAACTC TCTACCTTAC GCGGTCAACC AATCGTATGA
GTGACGTTGT AGCGTCCGCG GTTGAGCAAT ACCTTTCTGC TCGCGGGAAT CCACCAGGTC
CAAGCGATGG TGTCAGTATT GCGAGAACGG TGATCAATGA ACTGGACTCG GCAAGGTTTG
ATCCCCTGCT CGTGAGAACA GTGGCTAGAA ATGCAGCCAA AATATTGGAC GGGTTTATTC
AAACTGTCGA TGGAATGGTA AGCCATCTGT ACGCTGTTTG CTGGTAACTT AAAACTTATG
ACCATCAGTT GATCGAAGAC TTTACTGCCA CAAGTCTAAT CGGACCGAAT GCCACATCGG
CGCAGCAGGT CAATGCACAA CTGGTCGGAT GCCTCTATCA TTGCTGGCTG AACTTGGCGT
ACGTCGAACA TGATCTTACA GGTAAAGTTT GGGACATTCT GAGCCCTTCT GTAAATGTGA
GTCCTTAGCT TGCCGCCAAC GAAGAATTGT TCTAATATGG GACTAGTCTC TCGAAACGAC
CTATAGGCGC ATCACCAAAT CCCTTGATGC AGCTTTTCGC AAAGAAATTA CTTCAACCCT
TTCTCGCATT CACCGTGTGA ACTTTGACAC ACCCGTAGAC CCTTTAGCAA TGGGGATGGA
TGCCAGAGGT GGAAGCCCAT ATATGCAAGA TTTGGTCGAT AAAATTGGAT TTGTTAGGAA
CCAGATTTTG GGGAGAATGA GTTTGGGAGA ATACATGAAA GCATGGTAAG TCGTACCGCT
TACGATAGTA TCTGGCTAAA TAGTGATACC GCAGGGTTTT GGATCTGAGC AAATTTATCG
TTCGAACCTT CCTCTTGCAC GCAAGTATAG CCCGACCAAT GGGGGAAAGT GGAGCGCTTA
AACTCACAGG GGACATGACC GAGCTCGAGA TGGGTGTAAC CAATCTTCTG AGCACGGGCA
AGGTACAAGG AGCGAAAGAT AGTGTTAAGG TCGAGCAAGT GGGGGACGAC TATTTTGCTC
TGCGGACATT TCGGTAAGAT TTTTTCCACG CATGAGGAAC CATGACTGAT GAGCCCGTGA
AAGAACACTT CTCTTTGCCA ATCTCGAGTC CCTGGTCAAC CCAGTCGAGA CAGTCCATAT
TCCTCCCTTG ATTGTCCTCC ATCATATTAT CGTCCGCTCA CCTTTACGTC TGCCTCATGA
AGTTCATGGA TGGTCAGAGA GTGAATATGT TCTCTGGATC GATAAACATA AAGATGCAAA
GGAACAATGG GAGTTAGTTG AAAAGACTGT GGAGGATCAG GACGTGACGA ATAGTGAAGA
AGAAACGAAG GTGGACATTT ATGTCAAACT AATCAAGGAG GTCCTAGCGC ATGCCAGGCA
TGATGAACAA TAGTCAGCGT AATATAGCCA TTCAACGTAC CTGTTTTTAC TTGCTAGCCA
TGCAAA
 
Protein sequence
MPTDIFLDHK PFLSDSFDVH SYTNAILQGR QYTPDQSQQN NNKEDNDKAD LDVGAELARL 
NYGIEDVTKQ LRQEITASHL LLLNHLTTSL SLSSHLSPIR SSLISLSASI DRLHSKIHTP
YTNLSTLVRR QQNLRQIKDI ARRASRFVIV ARRLENQLER MGNAPEEDGE KGKTERRAEL
AKAALSCAEL DSLLRDESNE RGDDTTSIAL LDIDFVKAYS PLISRARDTV IEEMETMVFA
GLQELNQTVL SSALQTAHNL RLLPDLVSNL LDDLNDAVTL RVTKAFDVTA IGKEVARLER
VIDDVANCCI KVYTLEKVLR IKRDTLTQVE FFDEVMKRLD EKPSFTYWTT LAKAFETQTK
EAAKTSSWLQ QALSVGYPRL LRLFHDFFSR IAVHTDTVYT QEHQSPEAVL VLRSISSFET
LYLTRSTNRM SDVVASAVEQ YLSARGNPPG PSDGVSIART VINELDSARF DPLLVRTVAR
NAAKILDGFI QTVDGMLIED FTATSLIGPN ATSAQQVNAQ LVGCLYHCWL NLAYVEHDLT
GKVWDILSPS VNSLETTYRR ITKSLDAAFR KEITSTLSRI HRVNFDTPVD PLAMGMDARG
GSPYMQDLVD KIGFVRNQIL GRMSLGEYMK AWVLDLSKFI VRTFLLHASI ARPMGESGAL
KLTGDMTELE MGVTNLLSTG KVQGAKDSVK VEQVGDDYFA LRTFRTLLFA NLESLVNPVE
TVHIPPLIVL HHIIVRSPLR LPHEVHGWSE SEYVLWIDKH KDAKEQWELV EKTVEDQDVT
NSEEETKVDI YVKLIKEVLA HARHDEQ