| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC02390 |
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| Symbol | |
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| ID | 3256412 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006685 |
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| Strand | + |
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| Start bp | 683894 |
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| End bp | 687781 |
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| Gene Length | 3888 bp |
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| Protein Length | 1075 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 638255459 |
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| Product | pre-mRNA splicing factor, putative |
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| Protein accession | XP_569522 |
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| Protein GI | 58264732 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGCTATACC ATACATAATG GACCTCAAAA ACTTTATCAG CGATAATGTT GTCAGAGTAA
GCACCATGAT CCCACCGTCC TTCCCTTCCT AACCCCGCTC GCAGATACTC GGATCGTCCG
ACAGTGCCAC CGTCGACTAT GTGCAATCCC TAGGTATGTC CTGCGCTGCG TGCTACTCGC
GACCCGGCTA ATATCTTTCA TAGCAATATC TTCAAAGACG CCAGGCGATT TGTACAACTC
GCTATTATCG ACTGGAATGG CGAGCACTCC CGAGACTCAA GCGTTCGCTG CCCAAGTCCA
CTCTCTCGTT CCCCGCAAAA ACAAGACTAA AGCACCCAAA GCAGACAAGG CTGCGTCAGG
CCAACGATTC ACGCTGTTAA TGGATGAGGA TGCAGAAAGT AGCGGTAGCC GGAAAGAGAA
GAAGAAGAAG AAGGAAAAGG AAAAGGAGAA GGAAGGGTCA AGAGAGAGAG ATGTGGTCGG
CGTGAAAAAG GCAAGGCACT CGCGAAAGAG AGATACGGAG GGCAACTGGG ATTCCGACGA
GGAGGATAAG GAAATAAAGC GCCTGAGGAC ACGTTCACCG CTTCCCGATG GAGACGACCA
AGCTGAATTA CCCCTTGAGC CGGAAGAGAC GGAAGAAGAG CGATTAGAAC GAGAACGATT
GGAAGATCTG CGTCAGAGGG ACGAATTTGC GGAACGGATG AAGGAAAAGG ACCGTGATCG
TACGAAACGG ATTGTTGAGG ATCGGACCTC CAAAGCGCTA GGCGGCGTCG ATGCGTCAAG
ACGTGCAAAT CTCATGGATG ACCCTGCAGC GAGGGAGGCT GCGATCGCCG ACCTGCGTAA
CCGCTCTCGA CAAGAGTATC TCTCAAAGCG AGAGTTGCAG CAACTCGATT TACTCAAGAT
GGAGGTGGAA GATGAGAAAA TCTTGTTCAG AAACCAAAAA CTGTCCAGAA AAGAGGAACG
CGAGTTGGAG AGAAAGAAGG AACTTATCAA ACTCATGGAA GAGCGGAAGA AGATTGATGA
TGGAACCAAT GGCTACATGC TTCCCGATGA TTACATTACA GAGCAAGGAC GTCTGGATCA
AAAGAAAAAG AAGGATGCCC TGTATAAACG ATACGAAGAA TCCAAGCCCG TTGAAGGTCA
ATTCGTCACA GATGTCGATC AGTGGGAGGC CGCTCAGCAA GAAAGGACGG ACCTCACAAC
CGGCGCGTTG GACAAGGAGA TTCTGGTGGA GGACTATGAC TATGTCTTTG ACGAGTCGCA
GGAAATCAAG TTTTTGAAAG AGGGTAAGAT GGACGGAACC CTGACTGCAG AAGCACAAGC
GTTACTGGAC CAGGTGGATA AGCTAGAGAA AAATGGTAAG TGTTTGATTT TGAACGTATC
AACGACTTGA CAAGTATCTA ATTTATTTTT TATTTTTTGG GTAGCTCAAT CTATCCAAGA
AACCCGAAAT TCCCTTCCAA TCTACGAGTT CCGAGACGAA CTTCTCGAAG CTATCGCCGA
ACACCAAGTC CTCGTCGTAG TCGCTGAAAC CGGATCAGGC AAGACCACCC AGCTCCCTCA
ATATCTCTAC GAGGCTGGTT ATTGTAAGAA TGGCATGAAG GTTGGGTGTA CTCAACCCCG
TCGAGTAGCC GCTATGAGTG TCGCAGCGCG TGTGGCTGAG GAGATGGGTG TGAGATTAGG
GCAAGAAGTC GGCTATTCTA TCCGATTCGA GGATATGACA AGCGACAAGA CGGCTCTCAA
GTACATGACA GATGGTATGC TGCTCCGAGA GTTCTTAACA GACCCCGAGC TGTCAACGTA
CTCGGCGTTG GTCATCGATG AGGCGCACGA AAGAACATTG AGTACAGATA TCTTATTCGG
CCTAGTCAAG GTGAGCTGGA ATGGACTACA TAAAAAACGA TAAAGGAAGT GAGTATCGCT
AACGAGTAAC AACAGGATAT CGCTCGATTT CGTCCCGACT TGAGATTACT CATCTCCAGT
GCTACCCTCA ACGCTCAAAA ATTTGCCGAC TTTTTCGATC AAGCTCCTAT TTTTGACGGT
ACATCCCCTT TTTCTTTTTT CTCCCCTATT CTTCTATCGA TGGGGGTCTT GCAGTATAAT
TTACTAACCT TTATTTGGTA GTGCCCGGGC GTCGTTTCCC CGTTGATATG TTTTACACGC
AGCAACCGGA AGCGAACTAT ATGCACGCCG CTGTCACCAC TATCCTACAG ATCCATACAA
CCCAGCCCAA AGGTGATATT CTTTTATTCC TCACAGGTCA AGACGAAATT GAGGCAGCGG
AGGAAAGTTT AAAGGAGACA ATGTACGCTT TGGGGGACAA GGTGCCAGAG TTGATCATCG
CGCCCATCTA TGCAAACTTG CCCAGCGAAA TGCAAAGCAA GATCTTTGAA CCGACCCCTG
AAGGTGCCCG AAAAGTGAGC TTTTCTTCCA TCCGTTTTTC TGTTTTTCTA TTTAGCCCTA
TAACTGACAC ACTTTTTTTT TTGGTAGGTT GTGTTGGCCA CAAACATTGC TGAAACATCG
ATTACCATCG ATGGTGTGGT ATATGTCATT GATCCAGGGT TCGTCAAGCA AAACAACTAC
AACCCAAAGA CCGGCATGTC TTCTCTTGTC GTCGAGCCCA TCTCGCGCGC GTCTGCACAA
CAGCGTGCCG GCCGTGCCGG CAGAGTCGGT CCAGGGAAAG CTTTCCGTCT GTACACAAAG
TGGGCGTTCA AGAATGAGCT TTTACAGGAT ACCATTCCAG AAATCCAACG TACCAACCTC
TCCATGGTCG TTCTTATGCT CAAATCCCTT GGCATTAACG ATGTTCTCAA CTTTGACTTT
TTGGATAAGC CGCCAGCAGA TACCATCATC AGGTCTTTTG AACTGTTGTA CGCATTGGGA
GCGTTGAATC ACAAGGGAGA ATTGACTAGA CTGGGAAGAA GGATGGCAGA ATTCCCAGTG
GACCCCATGT TGTCAAAGGC GATCATCAAC AGTGAGAATT ACAAGTGTAC ACATGAAGTG
AGCCCGTTAT CGTGTCCCCG ATTTTCAACT CCATTGGGGA AAAACCAAAA AAAAATTGCT
AACGCGCTTC TTGATGTGCC ACAGGTTCTC ACGATCATTT CAATGCTCCA AGAATCCGGC
TCACTGCTTT ATCGTCCCAA AGATAAGCGT GTGCATGCTG ATAAAGCTCA TAAAAACTTT
ATCAAGTCGG GCGGCGATCA TTTTACACTC CTCAACATCT TTGAGCAGTG GGCAGAAAGC
AATTATTCTC AGCAGTTTTG CTACGAGAAC TTTGTCCAGT TCAAGAGTCT TTGCAGAGTG
AGAGATATTA GAGATCAGCT GGCGCAACTT TGTGATAGAG TGGAGGTGGT CATTGAGAGT
ACGCCGAATG ATGTTGTGCC CGTTCAAAAG GCCATTACAG CCGGCTACTT TTACAATACG
GTGGGTGGCA ATTTCACTGT TTCAATCTTT CGTGGTTCAT TAACGGCTCG TACAGGCACG
TATCGATAGA GGCGGTGGTT ATCGAACAAC CAAGAATAAC CATTCGGTCT ACCTGCATCC
TTCATCTTGC CTCATTGGCA TGCAGCCGCC ACCGAGGTTT ATTTTGTATT ACGAATTGGT
TCTCACATCC AAAGAGTATA TGAGACAGTG TATGCCGATA GAAGGTAGCT GGTTGTCTGA
ACGTAAGTTT ACTCGTTCCT TTTGTCATTC CAAAACCTTC AACTGCTGAA CCTGCCTATT
TCATTAGTCG CTCCTCATTA CTTCAACAAG TCGGAGATCG ATCAGCTTAT GGGAAGCGCA
AGTAAGGTGA AAATGCCAAA GCGGATAGAA CCACCGAAAG TTGGACCAGT GAATTCATGA
TTCGCTTTGA ATCGTCATGA TCACTTGTGA GCTAGACAGC ATGGAGCT
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| Protein sequence | MDLKNFISDN VVRILGSSDS ATVDYVQSLA ISSKTPGDLY NSLLSTGMAS TPETQAFAAQ
VHSLVPRKNK TKAPKADKAA SGQRFTLLMD EDAESSGSRK EKKKKKEKEK EKEGSRERDV
VGVKKARHSR KRDTEGNWDS DEEDKEIKRL RTRSPLPDGD DQAELPLEPE ETEEERLERE
RLEDLRQRDE FAERMKEKDR DRTKRIVEDR TSKALGGVDA SRRANLMDDP AAREAAIADL
RNRSRQEYLS KRELQQLDLL KMEVEDEKIL FRNQKLSRKE ERELERKKEL IKLMEERKKI
DDGTNGYMLP DDYITEQGRL DQKKKKDALY KRYEESKPVE GQFVTDVDQW EAAQQERTDL
TTGALDKEIL VEDYDYVFDE SQEIKFLKEG KMDGTLTAEA QALLDQVDKL EKNAQSIQET
RNSLPIYEFR DELLEAIAEH QVLVVVAETG SGKTTQLPQY LYEAGYCKNG MKVGCTQPRR
VAAMSVAARV AEEMGVRLGQ EVGYSIRFED MTSDKTALKY MTDGMLLREF LTDPELSTYS
ALVIDEAHER TLSTDILFGL VKDIARFRPD LRLLISSATL NAQKFADFFD QAPIFDVPGR
RFPVDMFYTQ QPEANYMHAA VTTILQIHTT QPKGDILLFL TGQDEIEAAE ESLKETMYAL
GDKVPELIIA PIYANLPSEM QSKIFEPTPE GARKVVLATN IAETSITIDG VVYVIDPGFV
KQNNYNPKTG MSSLVVEPIS RASAQQRAGR AGRVGPGKAF RLYTKWAFKN ELLQDTIPEI
QRTNLSMVVL MLKSLGINDV LNFDFLDKPP ADTIIRSFEL LYALGALNHK GELTRLGRRM
AEFPVDPMLS KAIINSENYK CTHEVLTIIS MLQESGSLLY RPKDKRVHAD KAHKNFIKSG
GDHFTLLNIF EQWAESNYSQ QFCYENFVQF KSLCRVRDIR DQLAQLCDRV EVVIESTPND
VVPVQKAITA GYFYNTARID RGGGYRTTKN NHSVYLHPSS CLIGMQPPPR FILYYELVLT
SKEYMRQCMP IEGSWLSELA PHYFNKSEID QLMGSASKVK MPKRIEPPKV GPVNS
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