| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC02310 |
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| Symbol | |
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| ID | 3256484 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006685 |
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| Strand | + |
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| Start bp | 659470 |
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| End bp | 663658 |
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| Gene Length | 4189 bp |
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| Protein Length | 1035 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 638255451 |
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| Product | transcriptional elongation regulator, putative |
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| Protein accession | XP_569507 |
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| Protein GI | 58264702 |
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| COG category | [B] Chromatin structure and dynamics
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG5406] Nucleosome binding factor SPN, SPT16 subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.920906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAGTCTCTGA ACATTGCTCC TCACGTCTTC TTTTCTATAT CCCCATACCT TCTACAATTT
GCGCGTGTCT CCAAAATGTC CGATATCCGT CTTGATTCGG CCACCTTCTT CAAACGCGCT
GCAAAAATCT TCGACTCTTG GGAGGCAAGT TAGGTCTGCC ATTCATGGCT GGTCGCGTTT
TCTGATGTTG CTCCAGAAAC CTAGCGGTGA TACACAAGCT CTGGAAGATA TCAATTCGAT
TGCGATTATT CTGGGGGATC CAAACGATGA AGTGGCATCT TACACCAAAA CTACTGCCTT
ACAGGTTTGT TTTCGTTTGC TGTTTTGGTA CGCGCTACAC GTGTGCTAAC TCTCCATTGC
AAGCTTTGGC TTCTCGGCTA TGAATTCCCT TCAACCTTGA TGGTCTTCGA AAAGTCACCT
CGAAAAGTTA CCTTTGTGTG CGGTTCTTCT AAAGGTAAGA ATTTTTTCGG AGAATTGATG
GAGAAGCTAA CGGACAACCC CATACGCTAG CCAAACTTAT CCGACAGCTT CAGCCTTCAG
ACGGAATCGA GATTGATGTC AAGGTCAGAT CGAAGGATGC CACGGCGGCT AAGGGTATGT
CGATGACAAT TCATGAATCT TTGGTGAACA AGTAGATAAC AGTGCTTTGC AGAGACTATG
GAAGAGGTCG TCGCATCGCT TAATGGCAAA TTCGGCAGTT TACCCAAAGA CAGGCCTATT
GGCAAGTTGG TAGACGAATG GAACTCTGCG TAAGTACCCT AGCGGCCTGT TATGCTGTGG
TATGGCAATG CTGATTACCC TTTAGTGTGG AGTCTAAGGG CGATTTGGAA GTCGTTGATG
TCGCTATTCC AATCTCTGCT GTCTTGGCCG AGAAGGATGG GGAGGAACTG GTAAGCGTCA
TGGGAACATA TTTTGAATCC GGTACTCAAA TTCCGTTAGA AAACCATCAT CACAAGCGCC
AAATTGACCT CGACCGTCAT GATCAATTAT TTCAAGTCCA AGATGGAATC AATCATCGAT
CGAGGAACCA AAATGTCTCA CGAAGCTTTG GCTCAGTATG TTTGCATTAC TTATTTGCTG
GATATAAGCC TAATTTTCCT GCAGATTGGT AGAAGAAAAG ATTGGTAACG AGGAGAAAGG
GCCCGACATG AAACTTTGGA ACAAGAATCC GTCTCTCGGC GAAGTCAGTG CTCAATGGTG
CAAGCCTATT GACATCAACT AACAAGAGGT GTAGATTGAC TTTGCCTCCA GCGAATTTGT
CTACTCTCCC GTCATTCAAT CGGGAGGAAA GTATGACCTC AAGGTGACTG CTGCTTCCAA
CAATGATAAT CTCAAACCCG GTATTATCCT AGCCAACATG GGTATCCGTT ACAAAAACTA
TTGTTCCAAC ATGGGGCGCA CTTTCTTGAT CAGTCCAAGC AAAAAACAAG AGACTCAATA
CACAACTTTA CTCGAAGTGC GGAAAGAGGC GCTTGCCCTT TTGAAAACAG GTGCTGTTGC
TTCTGATGTC TATAACTCAG TTCACCAGTC CTTGGAAACC AAAAACGCCA CCCTCGCGGA
TTCCTTCTTA AAGAACTTAG GTTTTGCTGT GAGTGTACTC AGTGGAATTC TTACTGAGCG
AGCATGTGCT TATGTTTATA TAGACGGGAA TGGAGTACCG AGATAGCAGT TTCCTCCTGA
ATGCCAAAAA CAACAGAGAA CTTAAAGAAA ATATGGTCCT TGTTTTGACT ATTGGCGTGG
CAGACTTGCC AGACGCGAAG AACAAGGGGA AGACGTAAGT TTTATTTCAT GATTTTTTAT
GTCATATTCG CTGAGCATCA GAACAGGTAC TCTCTACTTC TTTCTGACAC TGTCAAAATA
GGCCAAAACG GCGCAGTGGT GTTGACAGAG GGTTGTACGA GGCTCAGCGA CGTTGTTATG
GATATGGAGG TGAGCGAGAT TTGAATTAAT TTGAAGCATA TCTGATCAGG ACCTTACCAG
GAGGAGGAGG AAGAAGACGT CAAACCTCAA ATCGATAAGA AACCCAAAAT CAACAACTCT
CCTAAAAAGC CGAGATCCAG TACTGTCGGT GGCCGTGTTC TCAATGCCAA AACTCGAGGT
GCCAACCGCG AACAAGCCAC TCAAACCACT GCTGAAAAAA TTAAGACTAA TCAGCAGCGT
CTGCATGCCC AGCTTAATGC AGATGGGGTG AAGCGCTGGG AGGCTGATGC TGGTGGCAAA
AACGGGGCGC AGCAGAAGGT CGTGAAGAGA TATGAAAGCT ACAGGAGAGA GGAGCAGTTG
CCAAGAGCTG TCGAGGATAG AAGGATCTAC GTGGATGAAC AGAGACAGTC TGTTGTTCTG
CCTATCAATG GTTATGCGGT ACCTTACCAC ATTTCGACCA TCAAAAACGT TACAAAGACC
GAAGAATCGA ATCACATGGT CCTGCGTATC AACTTCCAAT CTCCTGGTCA AATTGCCGGC
AAGAAGGAGG ACATGGTAAG CTCAGACTTG TGTTCCTTTG CAGCCATGTA CTGATGAGCT
CCAGCCATTT GAGGACCCAG ATGCCAACTT TATTCGATCA GTCTCCTTCC GTTCTCAAGA
TCAGCGACAC ATGTTGAAAG TTTACGAAGC CATTACGGCC CTCAAGAAGG CTGCTGTCAA
GAGAGAGACT GAAAGGAAGG AACTTGCCGA TGTCATTGAG CAAGAAAAGT TGATTGAAGT
CAAAGGCCGT CATCCTTATG TCCTCAAGAA CGTATTTCCT CGTCCGGGAC CTGAAGGCAA
AAAAACTGAC GGTAACGTCG AGATCCATCA AAATGGTATC CGTTTCCGTC CCGACGGTCC
CGCTTCGAAG ATCGACATTC TCTTCAGCAA CATCAAACAT CTATTCTTCC AGCCTAGCGA
GAAAGAGCTC ATCGTTATCA TTCACGTTCA TTTGAAAGCT CCCATCATGC TAGGAAAGAA
GAAAACGTCA GATGTTCAGT TTTATAGGGA GGTCGCCGAT ATGTCTTTCG ACGAGACTGG
TGGCAAAAAA CGACGGGCCA GATACGGCGA TGAGGACGAA ATCGAACAAG AGCAGGAGGA
TCGCAAGCGT AGGGCTGAGC TTGACAAGCT ATTCCACGAT TTTGCTCGTC GTATTGAAAC
TGCTGCTCAA GCACAGCAAT TTGAACTTGA GGTTGATGTG CCTTTCCGCG AGCTCGGCTT
CAATGGAGTA CCTCACAAGT CTATTGTCGC CCTACTTCCG ACTACCAACT GCCTTATCCA
TATCTCGGAA TTACCGTTTA CGGTGATTAC CTTGTCAGAG GTAGAGATCG TACATCTTGA
ACGTGTGCAG TTTGGATTGA AAAACTTTGA TATGGTCTTT GTACTTCAAG ACCTCAAGAA
GCCGCCTGTT CATATCAATT CTATCCCAGT TGCGCATCTT GACAACGTGA AGGAGTGGCT
TGAGTGAGTA GTGCCTTTTA ATATCCACAT GGCTATCTTC CGTAACTGAC TAACTTCGTG
TAGCTCTTGT GATGTGCCGA TATCCGAAGG TCCTGTCAAT CTTTCTTGGC CAGCGATCAT
GAAGACTGTC AATGAAGACC CTCATGCGTT CTACGCGGAG GGTGGATGGA ATTTCCTCAC
TGGTTCAGGC TCTGTAAGAT TACCACCTTG TCCTTTTTTG TTGAGAAATT CTGACGATCG
ACACAGGACG ATGGATCAGA GGAATCTGAG GAAGGCTCTG AATTTGAGGG CGATAGTGAT
GTCTTTGATG AATCCAGCGG TAGTGACGAG GATAGCGAAT CTGCCTGTCA GTGTATTCCG
CTTGGATCTG ATTACGTTTG CTGATTTATT GTAGTCGAGG GCGACTCCGA TTCAGCTTCT
GCTGAGAGCC TCTCTGACGA GGGTGAAGAT TGGGACGAGC TTGAACGTAA AGCTAAGAGG
GGTAAGTGCA GATTCGATAC CGTCATTGAT GTCGGAGCAT AAAGCTGACG GAAATTTACC
AACCAGCCGA CGAGAAGCAC AGAACAGATA GAGGAGGTGA CTCTGATGAC GATGGGAAGA
AGAAGAAGAA GGGATCCAGG CGATAATGTG TTGTACCTTT ACTATATTTA ATTTCTGCAT
TGAATGGTCC TGAGACCGTT GGATGTTGCT TGATCCTGGT AGAGACTAGC AGTCGTAGTA
TTGCTCTGCG TGACAGTTCG CAGTCTTCTT CTGATGATGA TGCAACTCG
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| Protein sequence | MSDIRLDSAT FFKRAAKIFD SWEKPSGDTQ ALEDINSIAI ILGDPNDEVA SYTKTTALQL
WLLGYEFPST LMVFEKSPRK VTFVCGSSKA KLIRQLQPSD GIEIDVKVRS KDATAAKETM
EEVVASLNGK FGSLPKDRPI GKLVDEWNSA VESKGDLEVV DVAIPISAVL AEKDGEELKT
IITSAKLTST VMINYFKSKM ESIIDRGTKM SHEALAQLVE EKIGNEEKGP DMKLWNKNPS
LGEIDFASSE FVYSPVIQSG GKYDLKVTAA SNNDNLKPGI ILANMGIRYK NYCSNMGRTF
LISPSKKQET QYTTLLEVRK EALALLKTGA VASDVYNSVH QSLETKNATL ADSFLKNLGF
ATGMEYRDSS FLLNAKNNRE LKENMVLVLT IGVADLPDAK NKGKTYSLLL SDTVKIGQNG
AVVLTEGCTR LSDVVMDMEE EEEEDVKPQI DKKPKINNSP KKPRSSTVGG RVLNAKTRGA
NREQATQTTA EKIKTNQQRL HAQLNADGVK RWEADAGGKN GAQQKVVKRY ESYRREEQLP
RAVEDRRIYV DEQRQSVVLP INGYAVPYHI STIKNVTKTE ESNHMVLRIN FQSPGQIAGK
KEDMPFEDPD ANFIRSVSFR SQDQRHMLKV YEAITALKKA AVKRETERKE LADVIEQEKL
IEVKGRHPYV LKNVFPRPGP EGKKTDGNVE IHQNGIRFRP DGPASKIDIL FSNIKHLFFQ
PSEKELIVII HVHLKAPIML GKKKTSDVQF YREVADMSFD ETGGKKRRAR YGDEDEIEQE
QEDRKRRAEL DKLFHDFARR IETAAQAQQF ELEVDVPFRE LGFNGVPHKS IVALLPTTNC
LIHISELPFT VITLSEVEIV HLERVQFGLK NFDMVFVLQD LKKPPVHINS IPVAHLDNVK
EWLDSCDVPI SEGPVNLSWP AIMKTVNEDP HAFYAEGGWN FLTGSGSDDG SEESEEGSEF
EGDSDVFDES SGSDEDSESA FEGDSDSASA ESLSDEGEDW DELERKAKRA DEKHRTDRGG
DSDDDGKKKK KGSRR
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