Gene CNC02080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC02080 
Symbol 
ID3256756 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp584566 
End bp586502 
Gene Length1937 bp 
Protein Length354 aa 
Translation table 
GC content45% 
IMG OID638255430 
Productexpressed protein 
Protein accessionXP_569472 
Protein GI58264632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.389797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCATCTGTG GGTAGAAATT TTATTCATGT TCGCCTGGGG TGACTGCACT CTGTCATCAC 
GTCATTATCA TCGCAAACAA ATCTCTTCCA CTCGCTGTCC GCCTAAATAG AATCCACATC
TATCACCTCA TCCAGAAGCT TGAATTAATC GCAACAAAGT ATACCTACAC AGTGGTCGCT
CGACAACAGT CTTCGCACTT GTTTAACATA CCTCGACGCC CTATCATCAA CGGTGATTAG
CAGCGCATTC ATATCGCAAA GCAAGAAACA CATAGACTAT CCCCTAATCA TAGACATCGC
AAAAGAACTG TGGTGCCCAT TTCGGCGGAG TTACATTACA CCATTGGTTG TGCATCTTCA
CTCTTCAAAT TGTTCACCGC CACGTCTTTT TTGCTCTTCG ACATAACTGA AATCAGGATC
AAGCCTCAAG CCAACCTGTC ATTGCAATAG GCAGAATGAT CAGGGTGAAT TCCCCCCTTC
AAGGCCTCAT TGCCTTCTCT CTTTTATCGA CATCAGTTTT CGCCAGGTCT GATCGTATTT
GTCCCGAAGA CCCATATGCC AGCCCAAGCA CAGATACGTA TGTCTGCCAG CACCACTATA
TGCTGAAATT TCATAGAGAG GTATTGCGCT AATATCACTT TTCGTATGCA GGTGCAACCC
TATGAGATAC ATTCCCAACA AGGGTATCAA TATAGCTGCC GCTGTACTCT ACTTCATCGT
TGCTGCTATT CTTACTTTTC GTCCGTATTC CTGCATATAT TTTGACAACT GGTCAGACTG
ATAACAATAA TCCTCAGATT CTTTTCGCCA AAAAGCTAAT TACTTCCTTG CCCTTGTTAT
TGGAGCATGG TGTGAGGGCA TTGGCCTGGT GCTTCGTGTT GCCTTTAGGA CGAACCCTCA
TAGCACAGGT GAGCTCGGAC ATAATTGTGC CTATGGTAGT TATTTCTCTA ACGGTCGATG
TAGGGCTATA TATCGTCTGT TATCTCTTTG TCGTCCTCTC TCCCTGCGCC TTCCTTGCTG
GTGACTACAT TCTTCTTGGA CGTCTAGTCC AATATCTGGA CGCCCACCAT TATCTTCGTC
CCCTTCGAGC TCAGTTGGTT TCTTGGATCT TTATTGTATC TGATGGTAAG CAGTCGTGCG
TGTGGATTGT GCTTCACTAA AGGAACACCT ATATAGTGAT AACCTTTCTT ATCCAAGCAG
CTGGTGGCGG ACTGTCAACG GCAACGGATG TTCAAACCGC CCAAAACGGA GGTCACATCT
TCCTAGCCGG TATTGCCGCA CAAATGGCCA GTTTTATTTT TTTCACCATT GCATGGTTAA
TTTTCGGTAT CAGAGCGTGA GTGTTCTTGC GATATATAGC CGGAATTCAT ACTGATTGAC
TGCTTTTAGC TGGAGAGAAG ACAAAGAGTT ATGGCGACGT CCCGGGTGGA AGCCCCTTTT
CTTCGCGCTC GGTTTCACCT GTATTTGCTT TCTCATTAGA AGTTTTTATC GAACTGTTGA
GCTCAGTCAA GGGTAGGTGC AATTCTAATG CGCCGTGTTG AAACTAACTG CGTCCTCGCT
CCATAGATAC GTCGGCTATC TCGCTATTCA TGAGCGATAC TTCCTTGGTC TCGATTGCCT
TCCACTTTTG CTTGGTATCG CTACATATGT CTTCTTTTGG CCAGGGAAAT ATCTTCGCTT
CGCTCCTAAA CCTAAGAAAT CCAAGGAGTC CAAGGAGTCC AAGAAATCTA AGAAGTCCAA
GAAGTCAAAG AAGTCAAAGA ATGGGGTTGC GGAGGATGTA GAGGAGGGAT TGCCCATGCA
CGACCTGAAT GGCGAGGGAT TGGGAGATAT GGTCAAGGGT GACGAGAATT ATCAGATGAG
ATAAGTATGA TATTCAAACG CAACAACGGA GCTTTTTGTA GAGCGGCAGT ATTTGGAACA
TTAGGGGTAG ACAAAAT
 
Protein sequence
MIRVNSPLQG LIAFSLLSTS VFARSDRICP EDPYASPSTD TCNPMRYIPN KGINIAAAVL 
YFIVAAILTF HSFRQKANYF LALVIGAWCE GIGLVLRVAF RTNPHSTGLY IVCYLFVVLS
PCAFLAGDYI LLGRLVQYLD AHHYLRPLRA QLVSWIFIVS DVITFLIQAA GGGLSTATDV
QTAQNGGHIF LAGIAAQMAS FIFFTIAWLI FGIRAWREDK ELWRRPGWKP LFFALGFTCI
CFLIRSFYRT VELSQGYVGY LAIHERYFLG LDCLPLLLGI ATYVFFWPGK YLRFAPKPKK
SKESKESKKS KKSKKSKKSK NGVAEDVEEG LPMHDLNGEG LGDMVKGDEN YQMR