Gene CNC02000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC02000 
Symbol 
ID3256541 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp557164 
End bp559141 
Gene Length1978 bp 
Protein Length428 aa 
Translation table 
GC content46% 
IMG OID638255421 
ProductNEDD8 activating enzyme, putative 
Protein accessionXP_569457 
Protein GI58264602 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTACAACAAA ATACTGTTCC GCCACGATTC GTCCGTTGTG CGCGATTTTT GACACTCACC 
ATGACAGCAG CTCACATACA GTCCTATCAC TCAGATCCAA CCCGCTATGC TGCCGTGGAC
AATCTTCTTC ACAGGAAAGG CCCGTGGACA GACGAGAGAT TCCAGGGTGG TACCGAGGTA
TGTCATCCTT GTTCTTCCTC ACTTCACGGC TTATCGTATT TCAGACAGCA AACTTTCTCA
GGACAAAGGC AAAAATTTTG GTAATCGGTG CGGGGGGCCT TGGATGTGAA ATACTTCAGA
ACCTTGCGTT GTGTGAGCAG CGTTATTCCT TTAATTCTTC TTAAGCTCAT ATTCACCGAG
CGGGCTTCAA TGATATTCAT GTGATTGATA TGGACACGAT TGACATTTCC AATCTAAACA
GACAGTTTCT TTTCAGGCAT GTATATTCTG TGATGTCTCA CAGCTGAACT AATATAATCG
CAGGGAAGCC GACGTTGGCA AGTCCAAAGC TCTCGTGGCA GCCGAATTCG TGATGAAACG
AGTGCCCGGT TGCACCGTCA CCCCGTGGGT CTCTCATGCT TAGATTTACT CTGATGGATC
ATGGATCATG GATCACTGAC ATCTTCCAAG CTACCATGGA AGGATTCAGG ACCACCCTAC
ATCCTTCTAC TCCACTTTCG ATGTCATAGT TGCCGGTCTT GACTCCATCT CTGCTCGCCG
ATGGATCAAT GCAACGTTGG TACAGATGGC ACAGGAGGAT GAAGAGAATA TAAAGCCATT
GGTTGATGGC GGTACAGAAG GTAATGCTGC CTGTTTGACT TAGCGGTTGC CTGGAGCTGA
CAACTGATAG GGTTCAAGGG CCAGGCTCGT GTTATTTTGC CCACAATCAC GTCGTGCTAT
GAATGCTCAG TGCGTGTAAC GATATTCGGA AGTTCTCGCC TGACCAGTAC AGATTGATAT
GCTTACCCCT CCAACTGCTT TCCCCATATG TACTATCGCT AACACACCCC GTCTTCCCGA
ACACTGCATC GAATGGGCAA GCGTGCTGGA ATGGCCCAAG GTCTTTAGAG GTTTGTTCAG
AAGTAATATT TGCTGGCTGC CGCTAAACGT CGTACGCAGA CAAGAAGCTC GACACAGACG
ATCCGGAACA TATTGAGTGG CTTTATAAAC AGGCTGCGGC CAGAGCCGGA CAGTTCAACA
TCGAAGGTGT TACTTGGGCA CTTACCCAAG GCGTCGTGAA GAACATCATT CCAGCGATTG
CTAGTACCAA TGCCATCATA GCTGGTGAGT AGGAATGTCA CATCTCTATT GATATGGACC
AAGCCTCACT TTATGACAGC TTCATGTTGT AATGAAGCCT TCAAGATTGC GACTGCAAGC
GCACCTTATC TTAACAACTA CATGATGGTA CGTCTTGTTT TATTAACTGA ATGTGGCTGA
ACTATTTCGT AAAGTATGTC GGTAATGAAT CTGTTTATAC CTATACATTT GAGCATGAGC
AGCGACCAGA CTGCCCTGTA TGTGGCGGAG AGTCCCTCGT GGCTGAGGTC AAAAGGGACT
GGACATTGCA ACAACTTATT GAATCTCTCT CCCAGCGTCA AGATTTGTAG GTTCTTCGGG
CCGGTGATCT TCCTGTTTGT GCTGACAAAC TTGGCCGAAG GCAAGTATCT CGTCCTTCTT
TATCATTCTC TTCCGGAAAA GCTCTGTTCT GGCCAAGTCC GCCCGATGTT TACGAAGCTA
CCAAGGCCAA CCTCGAATTG CTGTTGAGTG ATTTGGTGCA GGACAATGAT GCGATCGTGC
TTGTGGACCC AGCATTACCT GTAAGCGCTT CGGTAACTGT AAAGTTTGTA TAGTACTTGG
TCATTTAGCA TTGAAGCTGT AATGTGCATA AGATCGACGC ATAATTAGAT TTCAGAGCGT
TTCAAAATTA ATTATGTGTT TGTCTATCGT TCAAAGGCAT GTCTGATAAG TATATAAA
 
Protein sequence
MTAAHIQSYH SDPTRYAAVD NLLHRKGPWT DERFQGGTET ANFLRTKAKI LVIGAGGLGC 
EILQNLALSG FNDIHVIDMD TIDISNLNRQ FLFREADVGK SKALVAAEFV MKRVPGCTVT
PYHGRIQDHP TSFYSTFDVI VAGLDSISAR RWINATLVQM AQEDEENIKP LVDGGTEGFK
GQARVILPTI TSCYECSIDM LTPPTAFPIC TIANTPRLPE HCIEWASVLE WPKVFRDKKL
DTDDPEHIEW LYKQAAARAG QFNIEGVTWA LTQGVVKNII PAIASTNAII AASCCNEAFK
IATASAPYLN NYMMYVGNES VYTYTFEHEQ RPDCPVCGGE SLVAEVKRDW TLQQLIESLS
QRQDLQVSRP SLSFSSGKAL FWPSPPDVYE ATKANLELLL SDLVQDNDAI VLVDPALPVS
ASVTVKFV