Gene CNC01950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC01950 
Symbol 
ID3256196 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand- 
Start bp539342 
End bp540486 
Gene Length1145 bp 
Protein Length233 aa 
Translation table 
GC content46% 
IMG OID638255415 
Productconserved hypothetical protein 
Protein accessionXP_569446 
Protein GI58264580 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAATAATAAT AGTAGTTGTA TATCAATAGT ATTGTTCACT GCCTGACTAA CCGTACTTCA 
AAAACCTCAG TTCGTAAATT CAGCCATGTC ACAGCCTAGC AAAGCCGTAC TTTTCGTCTT 
CACCTCGGCC GAGAAGCTTC TCAACGGTGC AGTACGTGTG ACCTCCCACC CTTTACCTTA 
TTTATCTTTA GTACCTGCCA ATGACTGATA TTGTTTTGCA GCCGACAGGA TGGTATCTTC 
CTGAAGCCGC CCACCCGTAC TACGTCCTTT CCCCCCATTA CCGTATTGAA GCCATCTCCA 
CTAAGGGTGG CCCCGTCCCT GTCGACGAAA CCTCTGTCAA GAATTTCCAG GACGAAGATT 
CGCAGAAGTT TTTGAAAGAT CCTGAAGCTC AAAATTTGGT CAAAAACACC AAAAAGGTAG 
AAGACGTCAA GGCCGCGGAT TATGAAGCCA TGTTTGTCAT CGGCGGAGTG AGTGCTGATT 
CCAAAAGGGA AGAGCGTAAT TCCAGACCGG AAGAGCGTGC TTGAATGGAA GTGTTTAGGA 
GCTGATCATG AAGCATCTCG TAGCATGGGC CTTTGATTGA TTTGGCGAAG AGTGAAAAGT 
TTGCCAAGCT TGTAGAGGAC TTCTACGTTG CAAAAAAGGT AAGACAATTG AACATTCTCA 
TGGGTGTCAT TCGGCTAAGG AATAGGGCTA GCCGGTGTCT GCAGTGTGTC ATGGTCCTGG 
CGCTTTCATC CTTGCTACCA ACCCGGCGAC TAGGAGGTCT ATTTTCGCTG GCGCACGTGT 
CACAGGCTTT TCTAACAGTG AAGAAGCACA AACTCCTTAC AATGATTTTG TCAATATTCT 
CCCTTTCAGT TTGGAAGACA AAATCAAGGA ACTTGGTGGG CAGTATGAGA AGGCCGACCA 
AGACTGGGGT GTCAAAGTCA TTTGGGATCA GGGAGTTTTA ACTGGTAGGT CACCATTGCG 
CATTACCCAA GCACCATCAC ATCACGCTCT CCACTGAACA TATATCCAGG CCAAAACCCT 
GCTTCTGCTG GACCTCTCGC CGTAAAGTTG AAGGAAATTT TGGAAGCCTG ATATGGCATA 
CAATTAAGCT AAGGACGGCA TATGTAAAGA ATACAAGGAG ATGTGACTTA TCATGATGTG 
CAAAC
 
Protein sequence
MSQPSKAVLF VFTSAEKLLN GAPTGWYLPE AAHPYYVLSP HYRIEAISTK GGPVPVDETS 
VKNFQDEDSQ KFLKDPEAQN LVKNTKKVED VKAADYEAMF VIGGHGPLID LAKSEKFAKL 
VEDFYVAKKP VSAVCHGPGA FILATNPATR RSIFAGARVT GFSNSEEAQT PYNDFVNILP 
FSLEDKIKEL GGQYEKADQD WGVKVIWDQG VLTGQNPASA GPLAVKLKEI LEA