| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC01910 |
|---|
| Symbol | |
|---|
| ID | 3256510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | - |
|---|
| Start bp | 516489 |
|---|
| End bp | 519480 |
|---|
| Gene Length | 2992 bp |
|---|
| Protein Length | 733 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638255411 |
|---|
| Product | methylcrotonoyl-Coenzyme A carboxylase 1, putative |
|---|
| Protein accession | XP_569564 |
|---|
| Protein GI | 58264816 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.254209 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CACTTACCAG AATGCGACCC ATAAGAGGTA TTCTTATCAA TCGGGGTGCT CTCGCAATGC
CCCAATATAT CAAACCCCAC CGCCTCACCC GAGCGCATCA TATGGTAGCC GCAAATCGGA
CACCCTGTGG CGGCCAATAT TCTACTGTTG CTCAACATGG TAATTTGGTC CATCTTTTCG
ACGGCAATAC CGAGCTGAAG GTCGGAAAAC GTCCTTTCAA AAAGATCTTG ATTGCCAACC
GGTGGGTAGC AAATGCAAAA GCATGTTCTA ACTTTACATA GAGGAGAGAT AGCATGCGCG
ATCATTCGTA CCGCTCGACG ATTGGGTATC GCTACTGTTT CGGTATACAG CGAAGCTGAT
CGAAACTGTC AACACGTTGC TATGGTATGT CTTTTCCTCT CTCTGCAATT TTATAGTTGC
TAATGAAAAA GGTCAGGCTG ACGAGGCATA CCTCATCGGG CCTTCCCCAA GTTCGGAGAG
CTATGTGAGC TCATAAACCA TTATAGTACA AAAGCTAATG TGGTTCTACA GCTCAAGATG
GAAAAAATAC TCCATATCGC AAAGCTCACC GGGGCAGAAG TACATCTTTT CAGCTCCTTC
TGGACGGTCT TCTAACCATC GTCACATAGG CAATACACCC AGGATACGGT TTTCTTTCAG
AATCTTCAGA CTTTGCAGAG AAAGTGAGAG ATGCAGGTCT CATTTTTATC GGACCTTCAG
CAGAAGCAAT CAAGAGCATG GGCAGCAAAC GTGAGAGTAA AGAGATTATG GTCGGTGAGT
ACCGTGCCAC CCTATCTGAC AGAAAAATGG CTCACACTAA GCACAGCGGC TGGTGTGCCA
TGCGTACCGT ATGTGCCTAC GTTACGTGCC GAACGCTGAG ACTGATGATC AGAGTTCAGG
GGGTATCATG GGGCTGACCA ATCTTACGAT GCATTGCTCA AAGGCTCTCA GCAGACAGGT
TACCCCCTTA TTATCAAACC GACACACGGC GGAGGAGGCA AAGGAATGCG CATCGTTCGA
GATCCTTTGA CACTTCAAGA TGAACTCCTC TCTGCCCAAC GTGAAGCACT GAAGAGTTTT
GGAAATGATG AAGTCTTGCT GGAAAGGTGG TTGGAGAAAC CAAGACACGT TGAAGTACAA
GTATTCGGAG ACCAATTTGG GAACTGCGTC GCGCTTTGGG AGAGAGACTG TTCAGTACAG
AGAAGACACC AAAGTTAGTG GGTTCAGTAA GAAATAAGAT TCAAAGCTCA TGTGAACGAC
TAGAAATCAT TGAAGAAGCA CCAGCCCCAG GATTATCACC TGCGTTGAAA CGGGACTTCG
CAGAAAAGGC AGTAGCAGCA GCCAAAGCAA TCAATTAGTA AGTTAAGACT TTTCGTACCT
TGCTGACTAG TGCAGTGTTG GGGCTGGGAC AGTTGAATTT ATCATGGATG CCGAGACGGG
CGAGCACTTC TTCATGGAGA TGTAAGTGTG TGTGTGTGTG TGTGTGTGTG CTTTTTCCCT
TGAAGGGAAA TGCCATTGCT GTTGCCAAGA ATGTTTGCTG ATATCATTCA GGAATACCCG
TTTACAGGTA GAGTGAGCTA TGCAACCACG ACGCAAGTTA ACCTTCATGC TAATACACTC
AGACACCCTG TCACAGAAAT GATTACGGGT ATGGATCTTA TAGAATGGCA GCTTTCTGTA
AGTCGCGCGC GGCCTCTTGT TAAGCTAAAA GCTCACTTGA AAGACAGATC GCGGCCGGTA
ATCCTATTCC ATACACCCAG GACAAGATCC CCTGCATCGG TCATGCGTTT GAAGCGCGAA
TCTACGCTGA AAAGCCCGAA TAGTGAGGAT ACTTGGCAAT TACTAATGAA GAAAGAGGAT
CTCACAATGG ATGGTAGCAA TTTTTTGCCA GACACTGGCA AGCTGTTCCA TGTGCGTTCG
CCAATTAATA CGCCACACCG GCTGGAGACA GGTTTCCAAG AAGGCGATGA AATCAGCTCC
CATTATGACC CAATGGCAAG TGCCGTCATC TCTTGAGAAA CGTTTTTATA ACCCTCGGAA
ATAGATTGCC AAACTTGTGG TTCATGGTAA AGATCGGCCT CAGGCTCTGT CGCTTTTACG
ATCGGCATTG GCGGAATATC AAATTGTTGG GCCCTCCACC AACATCGAGT TTCTCAAGTC
AGTCGCCGAA CACGATGACT TTGCAGCTGG GTCAGTCGAA ACGAGTTTCA TACCAGTAAG
TTCCTGTGAA TTGGTTTCCG AGCTGATATG ACGTGAAGTC ACATCACGAC GAGTTATTCC
CACCACGAGT TGTCCCCCAG GACATCTTGG CACAAGCGGC GGTTTTTTTG GTTCTCCGAG
CGGAATCAGG CCAGAAAAGT TTGGCACCTG CTGGGCCATG GGCATCCTTG GTGCACAGAC
GATTCAGTGA CATCTGTACA TTCTCATTTC GACTCGATTC GGAACAAGTC ACCGTCAACC
CGGTCGAATC TGGATATCAT GTTGCAATTG CAGGTCAAGA CTTGTACAGT CAGTTGATTC
AAAGCTGCGT TACCTCTTCC ACCGAGTTCA GTGCTCAAAT AGGGCCCAAA AAGATACAAA
GTACCATTAT CCCTATCTTC GTAAATGGTC TTGAAAAATT GCATATCTTT TCGTCATCAT
CGCACTATGT AATCACGCAC CATCCATCGC CTCTCGAGGG CATAGAAGGC CCGCAATCTT
CGTCTTCCAG CGGTACGGGG ACCCTCGTCT CGCCCATGCC TGCAACTGTC ATCGAAGTGA
AGGTCAAAAA GGGGGATAAA GTGAAGGAGA ATCAAGTGTT GTGTGTGTTG GAAAGTATGA
AGATGGAGAT CAATTTGAGA GCTGAAAGGG ATGGGGTAGT GGGCGAAGTG AGGGCCGAAA
AGGGTAAAGG TGTTGAAGAG GGAGAAATTT TGGTACTGTT GGAACCATGA CGGTCTAAGG
ACAACGGGTT GTCAGCCAAT GTTTTCGTCT CGTGTGCATA ATTATCGAAA TA
|
|---|
| Protein sequence | MRPIRGILIN RGALAMPQYI KPHRLTRAHH MVAANRTPCG GQYSTVAQHG NLVHLFDGNT
ELKVGKRPFK KILIANRGEI ACAIIRTARR LGIATVSVYS EADRNCQHVA MADEAYLIGP
SPSSESYLKM EKILHIAKLT GAEAIHPGYG FLSESSDFAE KVRDAGLIFI GPSAEAIKSM
GSKRESKEIM VAAGVPCVPG YHGADQSYDA LLKGSQQTGY PLIIKPTHGG GGKGMRIVRD
PLTLQDELLS AQREALKSFG NDEVLLERWL EKPRHVEVQV FGDQFGNCVA LWERDCSVQR
RHQKIIEEAP APGLSPALKR DFAEKAVAAA KAINYVGAGT VEFIMDAETG EHFFMEMNTR
LQVEHPVTEM ITGMDLIEWQ LSIAAGNPIP YTQDKIPCIG HAFEARIYAE KPEYNFLPDT
GKLFHVRSPI NTPHRLETGF QEGDEISSHY DPMIAKLVVH GKDRPQALSL LRSALAEYQI
VGPSTNIEFL KSVAEHDDFA AGSVETSFIP SHHDELFPPR VVPQDILAQA AVFLVLRAES
GQKSLAPAGP WASLVHRRFS DICTFSFRLD SEQVTVNPVE SGYHVAIAGQ DLYSQLIQSC
VTSSTEFSAQ IGPKKIQSTI IPIFVNGLEK LHIFSSSSHY VITHHPSPLE GIEGPQSSSS
SGTGTLVSPM PATVIEVKVK KGDKVKENQV LCVLESMKME INLRAERDGV VGEVRAEKGK
GVEEGEILVL LEP
|
|---|
| |