Gene CNC01850 details

Gene Information

• Locus tag: CNC01850
• ID: 3256629
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006685
• Strand: -
• Start bp: 503262
• End bp: 505367
• Gene Length: 2106 bp
• Protein Length: 491 aa
• GC content: 47%
• IMG OID: 638255405
• Product: MFS transporter, putative
• Protein accession: XP_569541
• Protein GI: 58264770
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2271] Sugar phosphate permease

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.278223
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCATCAC AGGAGGACCC CAAAGACTCC ATCAAGCGAG ATGAGGAGGA ATGGCACGAA 
AATGACCTTG AGAAGATGGA TCAGCTTGAG TTGGCTGCTC AATACGAACC CAACTCCGAC 
GCAGAAAAAG CGCTTGTATG GAAAATCGAC AAAAGAATTA TCCCTACCAT TTGGGCGCTC 
TACACTCTGT CGTATCTCGA CAGAGCCAAT GTTGGGTAGG TCATGATTGT CCGTGAGAGG 
GTTTCCATTG AACCGAAAGT GTGGCAGCAA CGCCAAAACG GGAGGTCTTG AGGCCGATCT 
CAACTTGACT TCTACACAGT ATTCGATTGT TCTTTTGGTG AGTAGTTTTC AGCCTATTCC 
AAAGGTGCTT GTTATTAAAA GCAATATCTG TTAAAGGTAT TTTTTATCTC CTATGTCATA 
TTTGAGGTTC CCTCCAACAT GATGATCTCT CGACTTCGTC CCTCGCTTTA CCTCAGTGGG 
CTCTGTATTA TATGGGGCGG TATTGCGGCT TGCATGGCTG CCGCAAAGAC ATATCAAGCA 
CTGGCTGGGA TCCGTTTTGT TCTTGGTTTC ATTGAGGCAG GATTCGCGCC TGGTGTGGCT 
TTTTACTTAT CATCGTGAGT TATTCTCTTT GGTCTATCTT CCGCTGCCTG CAGTGAGTGA 
TTGATGTTAA TCGATCTGAC GCAGATGGTA TAAACGGTAC GAGCTTGCTA GTCGATTTTC 
TCTTTACTAC ACTGCCACAG CCGTTTCCGG CGCTTTCTCG GGTCTCCTTG CTGGTGCAAT 
AGTGAGTCTT CATCTTCCAA ATTTAGGTCC GCGGATAGAG ATGTCTAATC TTCCTTTGCA 
GACGGGAAAC CTGGATGGGG CTAGGGGTTT GGCTGGTTGG CAATGGCTTT TCGTAAGTCA 
TACCATTCTT TCCACATATA TTGTCAGACT TATCTGTCAT TACAGATCAT TGAGGGTTGT 
GCCTCTTCTT TCCTTGGGTT CTTCACTTGG TTCATCATGC CTGACTGGCC ATCCACCACA 
AAATTTCTCT CATCCGACGA GCGTGTGCTT GCAGTTCAAC GACTGGCATA CGATGGTCTT 
AGTAGTACCG CTGGTGCTCA AGGCCATATC AGTCATTGGG CAGCTTTTAA GATGGCCGCT 
TGCGACTGGA GGACTTGGGT CTTTGCTTTG CTTTATATGC TTACTCAAGG CGCCCAGACT 
ATTCAATACT TTGTCCCTAC TCTGATCGGA GCTTGTATGT CTTTATCTAA ATAGGGATTC 
TGGTCATAAT TGTTAACATC GCTGACAACC GTTCCAGTGG GCTGGACGGG GTATCTTGGT 
CAATACCGAA CCATCCCTCT GTATGCTTGT GCGTTGTAAG TTATTTCATC CGTCCGTTGT 
CGCACGCGAA CTAACATCAG TTAACAGCGT CTGTATCATT GGCTTCTGCT GGGGCGCCGA 
TTATTATAAA GCCAAACCTC TCTTCATCAT CATTGGAGGG GCCTTGGGTA CAATTTTCTT 
CATTATTGTG ACTTGTGTCA CCAGCCACAT GGTGCAATAC GTCTTCCTTA TCTTTGCCTT 
CGGCTGTGTT TACGCCCTTC CCCCCCTCGT GAGCGCTTTC CTGTTTTTCA AGGCCGTTCA 
AGTGTTTGAC AACGTATTTT TGTACGCAGG TCCTTACCTG GGTGCCCAAC GTTCTATCGC 
ATCCAGCGGA AAAACGTGGT GTGGCTATCG CCCTGGTGAA CGCCTTGGGA TGTTCTGCTT 
CCATCTATGG CGTTTTCCTT TGGCCCAGCG AGGACGCCCC TAGATACATC CCTGGATTTG 
CCGCTACTAC GTGCTTCATG GCGCTCATTG TCATCATCAC CCCTATCATG TGGTACCTTG 
TCAACAGATA TCCTATTCAG GGGCCCGATG TCGACAAAGC TGTCAGGGAA GAGATCGAGA 
GACAGAAAGG TAGGGGTACC GCTTAGACTG TTCAAAATTC ATTTTTTCAA TGGCAGTGGC 
GGTGTGCTTT TTTCTCAATA CAAGGGTCTT GGGGGTTTGG ATTGACGCGC AGTAGTTATA 
GATCGTAGAC TTTAGACTGT CAGATATTAG TTGGCTTCTG TCCTCGATGC TCATAGGAGA 
AGAGTG 

 

Protein sequence

MPSQEDPKDS IKRDEEEWHE NDLEKMDQLE LAAQYEPNSD AEKALVWKID KRIIPTIWAL 
YTLSYLDRAN VGNAKTGGLE ADLNLTSTQY SIVLLVFFIS YVIFEVPSNM MISRLRPSLY 
LSGLCIIWGG IAACMAAAKT YQALAGIRFV LGFIEAGFAP GVAFYLSSWY KRYELASRFS 
LYYTATAVSG AFSGLLAGAI TGNLDGARGL AGWQWLFIIE GCASSFLGFF TWFIMPDWPS 
TTKFLSSDER VLAVQRLAYD GLSSTAGAQG HISHWAAFKM AACDWRTWVF ALLYMLTQGA 
QTIQYFVPTL IGALGWTGYL GQYRTIPLYA CAFVCIIGFC WGADYYKAKP LFIIIGGALG 
TIFFIIVTCV TSHMVQYVFL IFAFGCVYAL PPLVLTWVPN VLSHPAEKRG VAIALVNALG 
CSASIYGVFL WPSEDAPRYI PGFAATTCFM ALIVIITPIM WYLVNRYPIQ GPDVDKAVRE 
EIERQKGRGT A