Gene CNC01780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC01780 
Symbol 
ID3256501 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp489049 
End bp490469 
Gene Length1421 bp 
Protein Length373 aa 
Translation table 
GC content54% 
IMG OID638255398 
Productprenyltransferase, putative 
Protein accessionXP_569531 
Protein GI58264750 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.451641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCTCC TTTCCCGCAC CCGTCTCTTC CCCCGCCCGC TCCTTTCTCC CCTTTCTCGA 
CCCCTCCCAC TCCGCCCACG CGTGCTCACC ACCTCTGCCA TCCGCCGCGC CTCTCTCCCC
CCGACTGTCC CCCGCGTCTC CACAGAGCTC GTCCACCCCA AGGAGCAACA ACAACAACTG
CCAGCGCAAC CACCCACAGT CTTTGATAAA ATCCTCCCAC AATGGGCTCA AGGTGCCAAA
CCGTACCTCT ACCTCACCAG GCTCGATAAA CCCATCGGCT CCGTCCTTCT CTACTGGCCT
TGCGGTGCGT CCTTCGTCCC ATGCATCTTG TCCTGGCAGG CATTACTGAC ACCCATAGCA
GCGTGGTCCA TAACAATGGC ATCTACAGTG AACCACCTTC CCCCTACCAC TCCTCTATTC
TACATGTCAC TCTTCGCCGT CGGAGCACTC ATCATGCGAG GTGCTGGGTG CACCATTAAT
GACATGTGGG ACTGGAAGAT GGACGCCAAG GTCGGTACGT CACTTTTTCC CTCCCAAAGG
CGAAACGTTC GCGATCTTAC TGAGTAGGAC GAATGTAGAG AGGACAAAGA CAAGACCTTT
GGCCGCCGGC GATGTTACTC AATTCGGGGC TCTCACATTC CTTGGAGCTC AGCTTACTGC
CGGTCTTGCC GTGCTAACCC AACTTAACTG GTACAGGTGA GTTGCTTATG GTTCTATCAT
CAACCTAGGA AAAGAAGAAA AAGCTGATAC AACACTAGCA TCGTCCTGGG AGCTTCCTCG
CTAGGATTGG TAGTCATCTA CCCGTTCATG AAGCGTATCA CATACTTCCC TCAAGTCGTG
CTAGGTGCGC ACTGCCTTCT GAATCTTATC CTTTGTGAAC AGACGCCGAC CTTATAACAT
AGGCTTTGCA TTTAACTGGG GTGCCCTTCT CGGCTGGTCA GCCGTTGCCG GTGCTGTTGA
CTGGACGATC GCGACGCCCA TGTACCTCGG GGGTGCGGCT TGGTGTGTCG CCTACGACAT
CATCTACGCT CACCAGGTGA GTTACACAAC TTTAGGCTAG TAGCGTGCAA CAAGGAGTCT
GACGAGACTT TTAGGACAAG AAGGACGACG TCATCGCTGG TGTAAAGTCC ATGGCCCTCC
GATTCCCCGA CACTTCTCGC CAAGTCATCT CCACTTTATC CGCTTCATTC GTCTCCCTCC
TCACCTTTAC TGGCTACATG GCCGGTCTCG GACCGCTATA CTATCTCATT TCTTGTGGTG
GTGCCGCTGC TCATCTCGCT TGGCAATGCT TAACTGTCAA CTTTGACAGC CGATCTGACT
GCTGGAAAAA GTTTAGTTCT AATGGATGGC TAGGTGGCTT GATCTGGTCT GGTATCGCGG
CAGACTACGT CCAGCAGGTC ATGTTCGGGG TGCCTGCTTG A
 
Protein sequence
MLLLSRTRLF PRPLLSPLSR PLPLRPRVLT TSAIRRASLP PTVPRVSTEL VHPKEQQQQL 
PAQPPTVFDK ILPQWAQGAK PYLYLTRLDK PIGSVLLYWP CAWSITMAST VNHLPPTTPL
FYMSLFAVGA LIMRGAGCTI NDMWDWKMDA KVERTKTRPL AAGDVTQFGA LTFLGAQLTA
GLAVLTQLNW YSIVLGASSL GLVVIYPFMK RITYFPQVVL GFAFNWGALL GWSAVAGAVD
WTIATPMYLG GAAWCVAYDI IYAHQDKKDD VIAGVKSMAL RFPDTSRQVI STLSASFVSL
LTFTGYMAGL GPLYYLISCG GAAAHLAWQC LTVNFDSRSD CWKKFSSNGW LGGLIWSGIA
ADYVQQVMFG VPA