| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC01540 |
|---|
| Symbol | |
|---|
| ID | 3256585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | + |
|---|
| Start bp | 426889 |
|---|
| End bp | 430864 |
|---|
| Gene Length | 3976 bp |
|---|
| Protein Length | 1170 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638255373 |
|---|
| Product | DNA-directed DNA polymerase, putative |
|---|
| Protein accession | XP_569492 |
|---|
| Protein GI | 58264672 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CAAAGCACAG ACAAAATGAC TTCCAACGTG TTGCCTCTTT TCTGGCCGCT CTCGAATTTA
AGCAAGGAGA CCCGGCTCAC AGCTTCTGCA AATCTTGTGT CTTCCCTTGA ATCTTTCCAA
CGGTCCTTCT CTCAGAACGC CGGTTCCTCA AAGGGCAAGG AAATTGAGGA CGACGATGAG
GATGAAGAGT CAGCAAGCGA TAGCGAAGAG TCTGGAATGG AAGTAGATGC GAGCGACGAT
GAGGAAGAAA ATGACGAGAA GCACAGTCAG GCGGCAAAAT TGGACAGGCA GTTGAGCAAG
GACAATGCAG AGGATGTTGT CTACAGTGTC AAGCGACTCG TGCGAGGCTT GGGTAGCTCT
AGAGAAAGTA GCCGTCTTGG CTTTGCGGTT GCTCTAACAG AGGTAATAAT CTGTTCGTCA
GAAACTTGTG CTTATACTGA TGTTTGCACA GTTGCTTTCT CGTATACCAA CTGTCACCGC
TCGACAAGTC TTTTCACTTG TCATCCGCAA TTCTCAATAC AGCAAGAACA TGAAAGGCTC
TGACGAAAGA GACATGATGT TTGCCCGTCT TTTCGGTATG ACAGCCATTG TTCAATCCCA
GAGTCTTTTC GCTCCTAGTG CCACAAAGGA TGACTTCCGA GGCGTTATCG AAGAGCTTGA
GAAGCTTGGA CAGGCAAAGG CGTGGATGAG GGAAAGCGCT TGGTGGGCTC TGGTGCAAAG
CGTTTTGCTC CTTTTGGAAA GTAGGGTGCA ATGGAAGGAG GACGCTCTGC GGGAAGTGAT
TGATGTGGTG TTTGAAGAGA AGGGTTGGAC TCAGGAGAAG GTAGCTTTGG TACTTACCTT
GGAGCAATCT GGTCTCGTGA GCACATCTCT CTTGTAAACG CAACATGATC CCTTATTTTC
ATCACAGGAC ATTGACTGGA AGACTCACCT GGCTCCTACC TTCAAGCATA CCCCTTTACT
TAACACTCAC AACCTCGTCA CCCTCAGTCG AATTCTCAAG GTTCGCTAAT TTCCTTAGAA
TTTTTACAGC AACTGATTTA TATGTAGGAG ACCAGTGGAG ACGAGGAAGA TGGTGTTTCA
GCAACCATCA CTGGTTCTTG GAAACCCCAG CTTCACTTTG TCTGGAATAT CATCCTCGAT
CGGTACTTTG GGCCCTCCGC CCTTTCCACA ACCCTCGCGT CCTTCCAAGA CTTTTTCCGC
GTCGTTGTTG ACGGTACGTC TTAGTCTAAC ATCTATACCA TAATACTAAC GATATCTTCC
AGAATCCCTT TTCTCCAATA CTTCTTCTCC CCAGCGTCGA TACTGGGGCT TTCAAGTGTT
TGAACGAGCC CTTCCTCTTT TGCCGTCTTC TCAGATGCCT CTTATTTTTA CTCCGAACTT
TATGCGATGC TGGATGAACA ATCTCTCCTC ACCCGATCGT TATCTTCACA AAGCTGCTCA
GCAAATTGCC AAAAAAGTGC AAGACATTAT CAAAGAGAAC CCCAAGGTTG GTTACACATT
GCTTTCTCAG CTTGTAGGTA AACATGGTCG ACCCGATTTC GACAAAGTCA CCAAGACAAA
GACTGTCGAG TCAATTATGG GGAAACTCAA CGAAAAGGGT GTGAGAGATT TTGTCGACTT
TTTGAAAGAA ACTATTCTCG GTGCTTCTTC TCATGAAAAG TAAGCTTGAC GAGGGATTTT
TCACACGATG TCGTACTGAC TTAACCTAGC CTGGATGCTG CGAGACTGGC GGAACGTCGT
TCTTGGGCGC TCGATCAGAT CCAGGCTCTG TGCAGGAACG GTTCTGTCCC CAAGGACGAC
GCCTGGGTTG CTCCTCTCTT CGATTTCCTT CTTGTGCACG GATTCTTTAT CATTAGAAGC
GTCAACAAGA AAAGCCCTAT CACCGCCATA CATACTGTTC CTAAACCTCC TCTTTCCGAA
AATACGTCTA TTGCTTGTCG CGCGAAATTC TTTGCCTGTG CAGTGGAGTT GACTACAGCG
TCGATTCCTA GAAAAAATGG GTCTGAAGAT TCCAAAGCTC GTCAGCAAGG GTGCGATGCT
TCCGGTAGGC TCTGGCTCCG TCGAGCCATT GACATCATTT CAATCCTTGT GGATGATAAA
AAGCACGTTG AGGTCATCGC AGATGCCGAT GAAGAGATCA AATCAATCAG AAATGCGGCT
CTGGAGAGTC TCTCTTCTTT GGACAAGGTA AATTAGGAAC ATCCATCTGT GTCGGTTGCA
AAATTAATGA CAAATGTAGG TTAAGGAAGA CCGAAAATCG ATTTCTAGGG CTTTTGAAAT
TCTTATCTCC TTCTTCATCT TACAGACTTA CGATGAAGTT GAAGATTCCT TGGAGAACCT
CGAGGAGGTC AACACAGCTG CTCAGCAGTA CTTGGGCCAG AAAGAGGAAG AGGAAACACA
GGCCGCTGAC ATGTTGCTCG ACGTGCTCAT TGCTCTGCTC GATAAAGGTT CCAGTGATTT
GCGTAACCTT GCAAATCTGG TCTTTGATAT TATTTCCCCA GAACTTACGA AATCCAGTTT
AAATCTTTTG TCTGCTGTAA GTTTTGAAAT TGTATTTAGG TCACTGCAAC TGATTGGAAA
CGCAGCAACT TGAACAATCC GCAGCTGAAG CCGCTGCAAA CGAATCTGCG GAAGAGAGTG
ACGAGGATGC CGATGGTGAC GATGCTGCGT CTGATAGCGA TGGTGGAGAG GCCAATGAGG
AAGATGAGGA CGAGGAAGAA GACGAGGAGC ATGATGAGGA TCTGGGGGAT GTTGACCCTG
CATTCAGACA GAGAGTTGCC GAAGCTCTCA AAGTGTCCGG CATGGATGCC GGCGAGGATG
TCGAAGAAGG TTCCGAGGCC GAGTCAGAAG AATACTGGGA CGATGATCAG ATGATGAAGG
TCGACGAACA GCTTGCTCAG GTCTTCCGTG AAAGAGCAGC CGCTGCCTCC AAGAATGATA
TGAAGCGTAA GTCAACGATC AAATTACCTA TGGTCTCTTT CATGTGCTCA CTTTGAAACA
GACATCCTGA CCGAATCTAT TCATTTCAAG AATCGTATTC TCGACTTCTA CGACACTTAC
GCCAAGCGTC AACCAACCAA TCCCCTCATT ATCGATGTCA TCCTCACGCT TTTGAAGCTC
ATTCGCTCCG GTGGCGTTTC TGAAGCTGAG GTCACAAACA AGGCCGCGGG CATCCTTCGA
AGCAAGTTCA ACAAACCGAA AGATGTCCCG TCCACTGTCA ATATCGAGGC AGCCTCTGAG
AGTCTTAAGA CCATTCATTC GATGGCGCAG AAGGCTCATT CCGCCGAGTT TTCTACATTG
TGCAGTCTGT GCTCGCTTTT TGTTTCTCGA GCAATCGATG CTTCTGGTAT TTCTTCCAAT
TCGGCAACTT CTACCGTCGT TGAGATTTAC CGCGCCACTC TCAAAGACTT CATAATCCGC
AAAGCATCAC TTGTGCATCC TCCATTCCTT CTCGAGTTTG TGAAGCGGTT CCCTGTCCGT
GCATTCTCTC TCTACCACGA CCTTGTCTCC TACGTGGCCC CAGGCGCCGC CGTCAACGCA
TTTAGGCAAT TACAGGCTTA TAATGCTCTC CAAATCCTTG CTCAGCATCT TCCGGTCATC
TCTAAATCCG TATCCCCAAC TGAGGTAATT AAATTCGTCC AAGAAGCCAG CGAAAGCGTT
TTCACTACCC TTGAAACTGC TGCCGAAGCT AATTCGGACT CCAAGGATGC TTTGAATGCC
CAAAAGCTTA AAGATGTTGT CAAATTTGCT CTTCAGCTTG CTAGAAACAG CAAGAATGTA
GGTATCTCTT GGGATATAAG GAGAGTCAGC GAGGTCGGTG AAACGCTGAA ACACGGCAGG
AGAACAAAAG AAATGAAGGG TGTCCACAGT ATGTGGATAC AGTTGGAGGC TATTTTGAGC
AACAAAAAGG GTGAAAAGCG TAAGAGATAG AGGATTACAG AGGGAGAAAA GGGAGTTGGA
TAGAGGAGAC GGAAGA
|
|---|
| Protein sequence | MTSNVLPLFW PLSNLSKETR LTASANLVSS LESFQRSFSQ NAGSSKGKEI EDDDEDEESA
SDSEESGMEV DASDDEEEND EKHSQAAKLD RQLSKDNAED VVYSVKRLVR GLGSSRESSR
LGFAVALTEL LSRIPTVTAR QVFSLVIRNS QYSKNMKGSD ERDMMFARLF GMTAIVQSQS
LFAPSATKDD FRGVIEELEK LGQAKAWMRE SAWWALVQSV LLLLESRVQW KEDALREVID
VVFEEKGWTQ EKVALVLTLE QSGLDIDWKT HLAPTFKHTP LLNTHNLVTL SRILKETSGD
EEDGVSATIT GSWKPQLHFV WNIILDRYFG PSALSTTLAS FQDFFRVVVD ESLFSNTSSP
QRRYWGFQVF ERALPLLPSS QMPLIFTPNF MRCWMNNLSS PDRYLHKAAQ QIAKKVQDII
KENPKVGYTL LSQLVGKHGR PDFDKVTKTK TVESIMGKLN EKGVRDFVDF LKETILGASS
HENLDAARLA ERRSWALDQI QALCRNGSVP KDDAWVAPLF DFLLVHGFFI IRSVNKKSPI
TAIHTVPKPP LSENTSIACR AKFFACAVEL TTASIPRKNG SEDSKARQQG CDASGRLWLR
RAIDIISILV DDKKHVEVIA DADEEIKSIR NAALESLSSL DKVKEDRKSI SRAFEILISF
FILQTYDEVE DSLENLEEVN TAAQQYLGQK EEEETQAADM LLDVLIALLD KGSSDLRNLA
NLVFDIISPE LTKSSLNLLS AQLEQSAAEA AANESAEESD EDADGDDAAS DSDGGEANEE
DEDEEEDEEH DEDLGDVDPA FRQRVAEALK VSGMDAGEDV EEGSEAESEE YWDDDQMMKV
DEQLAQVFRE RAAAASKNDM KHILTESIHF KNRILDFYDT YAKRQPTNPL IIDVILTLLK
LIRSGGVSEA EVTNKAAGIL RSKFNKPKDV PSTVNIEAAS ESLKTIHSMA QKAHSAEFST
LCSLCSLFVS RAIDASGISS NSATSTVVEI YRATLKDFII RKASLVHPPF LLEFVKRFPV
RAFSLYHDLV SYVAPGAAVN AFRQLQAYNA LQILAQHLPV ISKSVSPTEV IKFVQEASES
VFTTLETAAE ANSDSKDALN AQKLKDVVKF ALQLARNSKN VGISWDIRRV SEVGETLKHG
RRTKEMKGVH SMWIQLEAIL SNKKGEKRKR
|
|---|
| |