| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC01170 |
|---|
| Symbol | |
|---|
| ID | 3256420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | - |
|---|
| Start bp | 326794 |
|---|
| End bp | 327965 |
|---|
| Gene Length | 1172 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | 638255335 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_569963 |
|---|
| Protein GI | 58265614 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR01458] HAD-superfamily subfamily IIA hydrolase, TIGR01458
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTAGTATCTA CTGTCTCAAT CATTAGCACG ATCAGCTAGT GAACATCGGC TCATTCTTTG
TCGTCGGGCC AGCTCCATTC ATTGTCTGCA TCCCGCATGC CCTAGTAAGC TCGCCTACAC
TAGCCAATAC CAAGCCAGCA CCATTCTGCA TTCCACTGAC ACTAAATCTC TTGGCAGCTC
ACAGAAACTC AAAGCTCTTC TCATTGACCT CAATGGGACT CTTCATATCG GCTCGGAGAG
CACGCCTTCG GCGGTCAAAG CCATTGAGCG ATTACGATCC GTCCGTATAC CCTTCATATT
CTGTTCCAAT TCAACCAAAG AATCTTCAGC AAGCTTGTTA GACAAACTGA AGAAGATTGG
GTTTGATGTT AAGAAGGAAG AATTGATGAC AAGCCTGAGT GCATGTCGAA TGATTGTTGA
GGAGAAAGGG TTAAAGTTAG TTCACCTTTT TCAATCCTCG TTGCCCGTGA TAAGAATCTA
ACAGTGTTCT AGACATCCTT TGCTCTTAAT GTCACCATCA GCCAAAGAAG AGTTTTCAAC
CCTTCCGCCT TCACAAGGTA TAAATCATGA TGCTGTCATT CTTGGGCTCC ATCCCGACTC
CCTTTCATAC GAGCACCTTA ACAAAGCCTT TCGCGTCTTA AAAGGCGAGC CACTTTCTTC
TCAAGAGAAG AACAATTCGA CAGGAGAACA CAGACCAGTC TTGATAGCCC CCCACGCCTC
CATGTTTATG CAAGATCCGG GGTCATCGTC ATTTCCACCT GGCTTATCGC TTGGTATAGG
TCCATTTGTA AGGGCCTTGG AGGAGGCAGC CAGCGTGAAG GCTGAGATCG TAGGAAAGCC
AACCAAAGGC TTCTTTGAGT TGGCTTTGGA GAAGTTGAAA GAGTTGAGTG GAGAGGATTT
TGAACGGAAT GAAGTAGCGG TAGTAGGTGA CGACGTGGAT AATGATCTCG GAGAAGGCGC
CAGAGAGCTT GGACTAAAAA GGATACTAGG TGAGCATGTA GCTTGAGGGA CGATTCCAGA
CATATGAAGT GTCTGATAAA AAGAGATCAA TTGCTGATGA ATTGTTTACA GTGAAGACAG
GAAAATATCG GACTGATGTA GAGAAGAAAA TCGAGCATCC TCCCGATACG GTGTATGATA
CGTTTGCGGC GTTCGTGGAC GACCTGTTAT GA
|
|---|
| Protein sequence | MPYSQKLKAL LIDLNGTLHI GSESTPSAVK AIERLRSVRI PFIFCSNSTK ESSASLLDKL
KKIGFDVKKE ELMTSLSACR MIVEEKGLKH PLLLMSPSAK EEFSTLPPSQ GINHDAVILG
LHPDSLSYEH LNKAFRVLKG EPLSSQEKNN STGEHRPVLI APHASMFMQD PGSSSFPPGL
SLGIGPFVRA LEEAASVKAE IVGKPTKGFF ELALEKLKEL SGEDFERNEV AVVGDDVDND
LGEGARELGL KRILVKTGKY RTDVEKKIEH PPDTVYDTFA AFVDDLL
|
|---|
| |