| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC00920 |
|---|
| Symbol | |
|---|
| ID | 3256603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | - |
|---|
| Start bp | 269864 |
|---|
| End bp | 272073 |
|---|
| Gene Length | 2210 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | 638255311 |
|---|
| Product | glutamate dehydrogenase (NADP+), putative |
|---|
| Protein accession | XP_569406 |
|---|
| Protein GI | 58264500 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.382106 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CCTGACTCGA TTCCAAATAT CACTGGCTGA TTACGGCTTC GGCCCATTTC GGGCGAGTGG
ATAGTGCGGA AACATAGATT TTTCGCGAGC TCAGTTTTCA ACGCCTGCCA CCCAGAGCCG
TCGTATATAG AGCCAGTAGT CCATCTCATC TCTTTTCTAT TTCTTTTCTT CACCTGTAAA
AAGCTCTCTC ATCCTCTTCT CACCCAAATC TCACCCAGTA CCAGCTGTCA AAATCAAACA
CAATGTCCAA CTACCCCTCT GAGCCCGAAT TCCAACAGGT ACGTAATCCC TTATGATGTT
CTTTTTTCGC CATGCTGCAT TCTGCTGACT GCCTTTGCTT ATGTAGGCCG TCGCCGAGAT
CACTCAGACT CTTGAGCCTG TAAGTTATCC TGCTCTACAT TACCATAGCC TCTATTTCAA
GTGCTGATAT TTTCGGTATT AGTTCCTTGC CAAGAACCCC GAGTACCGAC GAGCGCTCGA
CGTGGTTCAG GTCCCCGAGC GAATCGTGCA ATTCCGAGTT ACATGGGAGC GTGACGACGG
TACCATCGCC ATCAACAGGG GTTACCGAGT CCAAGTGCGT TGATTTTCTT CGCTGTCATC
GGGAGAGAAA ACTTACAATC CCCGAAGTTC AACTCTGCTC TCGGTCCTTA CAAGGGTGGT
CTCCGTCTCC ACCCCACCGT CAACCTCTCT ATCCTCAAAT TGTGAGTATC ATCACTCTCT
GAAGTGTGGT CATTGTCTTA CTCGTTTTAG CCTTGGTTTC GAGCAGATTT TCAAGAACGC
TCTCACTGGT CTCATGATGG GTGGTGGTAA GGGTGGTTCC GACTTTGACC CCAAGGGCAA
AACCGACAGC GAAATCCGAC GATTCTGCTA TGCCTTCATG CAGGAGCTCT CTCGACACAT
CGGTACCGAC ACTGATGTCC CTGCTGGTGA CATCGGTACT GGTGGACGTG AGATTGGCTT
CATGTTCGGT GCATACAAGA AGTACAGGAA CGAGAACGCT GGTATCCTTA CTGGTAAGGG
TGCTGACTGG GGAGGTTCCC ACATCCGTCC CGAGGCCACT GGGTAGGTTT TCTTTTGTTT
GAACAAACAT TCCTCAAGCT GACCTGACTC CAGTTACGGT CTCGTCTACT ACGTCACTGA
AATGCTCCGT GACCTCGACA ACACCGACTG GAAAGGCAAG CGAGTCCTTA TCTCCGGTGC
CGGTAACGTC GCCCAGTACG CTGCTCTCAA GGTTATTGAG CTCGGTGGTA CCGTCCTCTC
TCTCTCCGAT TCCACTGGTG CTCTCGTCGC CACTGGTGAT GAGGGCTTCA CTCCTGAGGA
GATCATGAAC ATTGCCGACA TCAAGCTCCA GCGAAAGAGC TTGACTGCCT TCGCCACTGG
CTCCAAATTC CAATGGCACG AGGGCAAGAG GCCCTGGACC CTTGTCAGCA ACGCCGATAT
CGCTCTTCCT TCTGCTTCCC AGAACGAGCT TAACGACGAG GAGGCTAAGG CCCTCATCAA
GGCCGGTGTC CGCTACGTTG CTGAAGGCTC CAATATGTGA GTGCACCTTC TGCAACTTCT
TTTCGGCAAT ACTTACATCA TTATGAACAG GGGCTGCACT CTTGACGCCA TTAAGATCTT
CGAAGAGTCC CGAACTGCGG CCAAGAACGC CACCGACGCC GGTGTCTGCT TCTACGCTCC
TGGTAAGGCT GCCAACTGTG GTGGTGTTGC CGTTTCCGGC CTTGAAATGG CCCAGAACTC
CCAACGTGTA CGTCGCACCA TCAGAGCAAG TTTCTGAATA TATACTGATA AAAACCACAA
TTAGCTCAAG TGGACTCACG AGGAGGTCGA CGCCAAGCTC AAGGCCATCA TGATCAACTG
CTACCAGACC TGTTGGGAGA CCGGCAAGCA ATACGCTGAG GCTGGTGTTG TTCCTTCCTT
GGTCGCCGGT GCCAACATCG CTGGTTTCGT CAAGGTTGCC AACGCCATGC GCGAACAGGG
TGACTGGTGG TAATTGTTTC AGCCCGTTCC CCAGCGCACT TCGTCTGCGC CACCCACCCA
TCAGCATCAC GCATCACCGC CAACCGATCT TCATACCGGT TTAATTTTGT ATAATTAGCT
TTGGTATAAA AGTAAACCAA AACGCCGCAG CATTGTCTGT ATCATACCCT AGATTTTTTT
TGGTAGTTGT TGGCATCAGG TCAGAAGGAT GAATTGCATG CTTAAATGTA
|
|---|
| Protein sequence | MSNYPSEPEF QQAVAEITQT LEPFLAKNPE YRRALDVVQV PERIVQFRVT WERDDGTIAI
NRGYRVQFNS ALGPYKGGLR LHPTVNLSIL KFLGFEQIFK NALTGLMMGG GKGGSDFDPK
GKTDSEIRRF CYAFMQELSR HIGTDTDVPA GDIGTGGREI GFMFGAYKKY RNENAGILTG
KGADWGGSHI RPEATGYGLV YYVTEMLRDL DNTDWKGKRV LISGAGNVAQ YAALKVIELG
GTVLSLSDST GALVATGDEG FTPEEIMNIA DIKLQRKSLT AFATGSKFQW HEGKRPWTLV
SNADIALPSA SQNELNDEEA KALIKAGVRY VAEGSNMGCT LDAIKIFEES RTAAKNATDA
GVCFYAPGKA ANCGGVAVSG LEMAQNSQRL KWTHEEVDAK LKAIMINCYQ TCWETGKQYA
EAGVVPSLVA GANIAGFVKV ANAMREQGDW W
|
|---|
| |