Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC00850 |
Symbol | |
ID | 3256616 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | + |
Start bp | 243460 |
End bp | 246016 |
Gene Length | 2557 bp |
Protein Length | 538 aa |
Translation table | |
GC content | 47% |
IMG OID | 638255303 |
Product | transporter, putative |
Protein accession | XP_569391 |
Protein GI | 58264470 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.652064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCGCCG CAGTACCTGT TGTAGTAGAC ACTCACGCTG TCACTAATCC TCGACCTGTC GACCAACCAG ATTCTCTTAT CAAAGATGAC ATTGAGGACA AGGGTGAACT TTCTTATTCA GACATCAACG ATTCTGTCGA GACCCTCGAT GCCAAATGGT ATGAGCCTCC AGACTCCTAC GAATCTAAGC ATCGATGGGA TCCAGAAGCC AAGTGGACAA CGCAGGAGGA GACCAGATTA AGGAGGACAC TGGGTGAGTA ACAGTTTATC CACTACCACA TGAACACATG CCTATATGTT TGCATAGACA TTCGTGTGGC TGCTTTTGCT TGTCTTTGTT TCGCAGCTCT TCAACTGGAT CGGGGAAATG TGAGAACTCA AGACCACCAA TAAAGGTAAC TGTTGCTCAT GTGAAGTTTA GATTACCAAT GCCCTTTCGG ATGGAATGCT CGCCGACATT GGCCTCACTA CCGCAGGATG TAAGTGACAG TGTTCATTGC CACTATAACA ACATGCTGAC ATGTACCAGA TAATACTGGG ATGACCATCT TTTATTGTTG CTTCTTGGTC GCCGAACTTC CATCTCAAAT GAGTAAGTCA CTTATTGGGA CTTCGTATCT GAGAGCTGAT ATCTCATGTA GTATCAAAAA AGCTCGGTAG CGATGTCTGG ATCCCCATCC AAATGATGGC TTGGTCAATT GTCGCTATTT GCCAGGTGGC TATTAAGGGA AAGTCTTCGT TCTACGCTAC CCGAGCTCTC CTTGGTTTGC TCGAAGGGTA GGTATATCTT TCACGATGCT GGAACTATGC TGACTTTGTC GTAGTGGATT CATTGCCGAT ACAGTCAGTA TACAACGCTG AATTCCCGTT CTGCTCCTCG CTGACTTATT TCTGCCACCC TCGATAGGTT CTCTATTTAT CGTAAGTTAG ATTTCCGCGC GCAATCAAAT TCGAAATTGT TCAATGCTTA CGAATGAAAT CTCGATCTGC TACCAACAGC TACTATTACA GTACGTACTC CCCGTTGACT ATATTTTGTA ATGATGTGTA GTAATTATGT TGCCACAGCT GCCGCTGAAC TTACCATACG GCTTTCTTGG TTCTGGGTTT CACTGACCAC TACTACCATT ATCGGTTCTC TCTTGGCTGC TGGCATTCTT CAGATGCGAG GCGTTCACGG ACTTGCTGGG TGGAGGTGGC TCTTCGCTAT CGAAGGCGCT CTTACCTTCC TCATCGGCTT CTGGGCTTGG TGGTACTTGC CCGCCTCTCC TACTGAGACC AAAAAGTGGT GGAGACCCAA TGGATGGTTC ACTGAGCGAG AGGAGACCAT CATTGTCAAC AAAGTCCTCC GAGACGACCC CACCAAGTCT TCTAGTATGC CTGACACTAT GCTTGCGATG CGATGTCTGA GGATCTAACG TTGGTATAGT GCATAACCGT GAAGGCTTGT CGCCTATAGA CCTTTGGCGC TCTATTGCTG ATTTTGACAT GTGGCCTCTC TACGTTGTGG GTAGATCCCG AAGTTGATCT ATACGTGAGC TCATGCCTTC CCCTAGATCG GTTTGATTGC TTTCATTGTC CCTTCTACCG TCCAGGCATA CTTTACTCTT ACACTCAGGA ATTTGTAAGC CTCTTGCATT CGTGGCACAA TATTGCTATA ACTCATATCC GTTTCAGGGA CTTCTCCACC TTCCAGACCA ACTTGCTCAC TATCCCTAGT AACGTCATGT TTATCTTTAT GAACCTTGGT GTTTCCTTCT TATCCAAGAG ACTTAACGAG CGCCTTATCG TCACAACTGT CCAACCCATC TGGCATCTGA TTTTCCTGAT CGTAATTATT GCTCTCCCTG ATGATGTTAA CCGATGGGCA AAGTGGGTGG TTACCAGTCT GCTTATGGCT TACCCTGTAA GTGAATGTTG TGCTTACAGG ATCTATCATA CTGACAGTGT GTATGCAGTA CTGCCACCCT ATTTTGGTCT CTATGAACAG TATGGTAAGT GAAATTGTAG CGCTTTTAAG GCAATCCTGA TGATACCATA GAACGCCGGG TCCGTCCGAA CACGTACTGT TGCCAGTTCT GTGTACAACA TGTTCGTCCA AGCCGCATCA CTTATTGCCT CCAACATCTA TCAGCCTTGT ATGTTTTGCT CTCTATATCA TTAAGGTCAC TGGTTAACCA GTCTATCCCT GCTCAGCCGA CGCACCCTAC TATCACAAGG GTAATCGAGT CCTCATTGCT CTCAGTGTCG TCTCGATTGT CATGTGTTGG TCTGCCAAGG CCTGGTACAT CTGGCGCAAC AAGCAGCGTG CCAAGATCTG GGACTCTTGG ACCATCTCCC AAAAGGAGGA GTATCTCGCC ACTACCAAGG ACCTCGGTAA CAAGAGGTGG GTCGAACGGG ATCATCAAAT GACGTTCCGT GCTGATTTAT TCTCGACTAG ACTCAACTTT CGTTTTTTGC ACTAGGTCTT TTCCCATTCA CCGCCAGCAC TCTTTGTCTG TATTCTTATT CCCGGCCTTG TTAGTTCCCC TTTTCCCTTT ACTTACGGCA GAGTGTT
|
Protein sequence | MSAAVPVVVD THAVTNPRPV DQPDSLIKDD IEDKGELSYS DINDSVETLD AKWYEPPDSY ESKHRWDPEA KWTTQEETRL RRTLDIRVAA FACLCFAALQ LDRGNITNAL SDGMLADIGL TTAGYNTGMT IFYCCFLVAE LPSQMISKKL GSDVWIPIQM MAWSIVAICQ VAIKGKSSFY ATRALLGLLE GNYVATAAAE LTIRLSWFWV SLTTTTIIGS LLAAGILQMR GVHGLAGWRW LFAIEGALTF LIGFWAWWYL PASPTETKKW WRPNGWFTER EETIIVNKVL RDDPTKSSMH NREGLSPIDL WRSIADFDMW PLYVIGLIAF IVPSTVQAYF TLTLRNLDFS TFQTNLLTIP SNVMFIFMNL GVSFLSKRLN ERLIVTTVQP IWHLIFLIVI IALPDDVNRW AKWVVTSLLM AYPYCHPILV SMNSMNAGSV RTRTVASSVY NMFVQAASLI ASNIYQPSDA PYYHKGNRVL IALSVVSIVM CWSAKAWYIW RNKQRAKIWD SWTISQKEEY LATTKDLGNK RLNFRFLH
|
| |