Gene CNC00840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC00840 
Symbol 
ID3256525 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp236562 
End bp239309 
Gene Length2748 bp 
Protein Length347 aa 
Translation table 
GC content48% 
IMG OID638255302 
Productexpressed protein 
Protein accessionXP_569955 
Protein GI58265598 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAATTACAGA CCGTCACTGT CTCTTATACA CCATGAACCG CCCCATCTCC ACACTTCGCC 
TCGTTCTTTC CGCTACTCAG CCTCGCTTCG CCCCGTCACC TGCCGTCCTT CGCCCATTTG
TATCCTCCAC ACGCCTCTAC GCTACCCACC ATGAAACGGC TTCCCCGCAT TCTCAATCAC
AAGCCACAAG CGATCTTTTG AAGGGGCTCG GAAATAAGAC GGGAACATCT TCTGGTACCC
AAGACACTGT CGGGCCATTC CCTCTTGGAG TTGGGCCCAA TGGCCGTAGG AAGACTTGGA
AGTCATGGTC TGACTTGAAC ATTGGAGGAA AGCGTAAGCA TCAGTCTTGC AGTTCCAACA
ACGTCTCAAC TGAAGTCTAA TACAGTGGTC CGTACAACGC AGCAGACTGG TAATCTGACT
GTCATCCTTT TCGGAGGCGC CCTTTTTGTT GTCCTGACGT TTGCTCTCAC AACGGAATTG
TTTGCAAAGA ACTCCCCTTC TGTGCTCTAC TCCCATGCCA TAGATATGAT CCGCGGTTCA
AATGCTGTAC GTCTGATCAA CATGTTTATT CTAAACCGTA CTGACAATCC ACAAGCTTGA
CGCGTACCTT CTGCCTCCTC TTAAATTCAC TCATTCCCCA CATTCCTCTG CACCCGTCAG
AGGCTCTCCT CCAATCGCTC ATACCTTTAT CCGCAACCCC ACTTCAGGCA AGGATCATCT
TGTTATCTCT TTCTGGATCC ATGGTAGGGC CAAAGACGAA GAAGAGACTC TTTCATGGAT
AAAACAAGGT TGGAGGTCTG CTGTCGCTTG GGGAAAGGAA GGCATGGATA TGTTGGTGGG
CGAAAAACCA GAAGATGTGG TAAAGGAAGA TGTGGAAAAG AAAGAGCGAG TGGTGGTTAA
GAAGGAACCC GGAACGTTAT CCAGATGGTT CGGTGGGTTG AATTTGAGGT CGACTGCTGG
ATCTCGGGTT CCATTAGCAA AAGAACTGCC TCCTGCTGGG ACATATACCG TGGGAGAAGC
TCGAGGAGAG TATGTCAAGG TACGTTATCG TCTATCTACT CGTCAGGCTT GGCTGACTTG
TGATTTTCTG CAGGATGAGG CTGGAGAGTT CCAAATGCTC TCGCTGATAG TCGACATACC
ATCATCCAAG GCTTCCTACC CTGGACGAGC TGTCATCTTC CAAAGCCCCG AGGCGGAAAC
CGAGGGCCTT TTAGGCAAAC GCATCCGATG ATTGTCAGCT ACGGAACGGG TAAGGACAGA
ATCAGAAGTT TCTCGCAGCA ACAGATGTGT AATGCATTTG TTGTAAAAGG TTACTCTTGT
CTTTCCACTC TTCGTGTAGT AAATGGGCTT CTGGCAAGTT CGCATGCTGA TGCCTCAAAT
TTTAAGCGTG TGAGGAGATC ATATACTAAA TGTGAGAGCT GTGGTTTAAT TCCGGATCTT
AGGAGGAAAT GTACTAATGA GAGGATGCCC AAGTATGCTG GTATGCGAGA AATAAGCAAT
TGTGCCGATA AGTACAGATG ATAAATTACA ACAATGCTTG TGCTTTGGCT TTTTCCGGGC
AGCCGTAATC AGATAGGAAG ACCTTTCTAT GCCATATCCT ATTTTAGCTG CTCAGAACAG
ATGTGCGAAG ACGACGAGAT GTGAGAAGCA GAATAGGGAG CGAAGTCGTT TGACTATTGT
TTAACGGCGT ATAGAGCCAC AAGGCGTTGT AAGTACCTTG AGTACGGATT TAAAAGCTAA
CTCCAAACTT CAGCGTTGTC ATTTTACTGG GGTATATGGA CCCACCTCAT CGAGACAGCC
CTCGATCATG CCTTCAAGAT CTGTAAGACG ATATCCATAA GCAACTAATT CAGGTAGAAA
TGAACGGAGT TCCGAAGAAA TAATTCGAGA ATGTAGAGAG CCAGCCTGTG CCAAGGTAGG
GGAGTCTAAA TAAGCCTAGG TTAGTCGAGC ATCTTCCGGT CATTGACGTA GAATGAATTT
ACTCTCTGGC ATGTAGCAGG CTACTGGTAC CCCGATGTCC TGGACATATG CAGAGAGACC
ACTGTGAGGC AGTCAGTTGG TGACATCGTC ATAGATGAAA CAAAACCTTA CAAGACCCCT
GCCGATCTCA CACACTCACT GAGCCTAGCA GCCATCATTG AATCAACTGA TACATTCACG
GTTAGTACTT AATCTGTCCA TCCCGGAATC CTGGGCTTAC TGCCATTAGC GGCTAGTGCC
TTCTCGATAG AAGCATTCCA CTGGAGTAGA CAAGGGGGCA GATTTTGACT AGACGATGAT
TCCTGTTAAC ATATCAGCGC TTCCCATTTG TCGGACCCAG AAAGCGGACC TACATATCCC
AGACAATGCT CAACGATTAC AAGTAGACCG CCATGACGAA GCAGTCTTGC AAGGCGCTCA
AGAAAAATGC CGTAGCTTTT GTACGTTCTA GCCAGACCTT TTACTTGGAT AACGTCTGAA
AGTGAAATAG TCAACTTGAG GCGTAGAGTA GCGAGATACC TCCTACTGAC CAAATGAGCT
CGAAGGCCAC GGCAGAGGAC GGGCAATGTC TGCAGAAGAG AAGTCCAGGT TGCCATGGTG
AATTCTTTCT CCAGTATATG ACTTCCAGTC TGGCCTGGGA TGAGGCGATT AGGGGAGGAA
AGGAAGGAAA AAGAGGGAGA AAAAAGGTAG AAATCTGCTT ACGCGAGAGT CACAACATCG
GCAAATGGTT CAGCATTGGC TAAAAGTGCA GCCCATTGAC CTAAAGTC
 
Protein sequence
MNRPISTLRL VLSATQPRFA PSPAVLRPFV SSTRLYATHH ETASPHSQSQ ATSDLLKGLG 
NKTGTSSGTQ DTVGPFPLGV GPNGRRKTWK SWSDLNIGGK LVRTTQQTGN LTVILFGGAL
FVVLTFALTT ELFAKNSPSV LYSHAIDMIR GSNALDAYLL PPLKFTHSPH SSAPVRGSPP
IAHTFIRNPT SGKDHLVISF WIHGRAKDEE ETLSWIKQGW RSAVAWGKEG MDMLVGEKPE
DVVKEDVEKK ERVVVKKEPG TLSRWFGGLN LRSTAGSRVP LAKELPPAGT YTVGEARGEY
VKDEAGEFQM LSLIVDIPSS KASYPGRAVI FQSPEAETEG LLGKRIR