Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC00840 |
Symbol | |
ID | 3256525 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | + |
Start bp | 236562 |
End bp | 239309 |
Gene Length | 2748 bp |
Protein Length | 347 aa |
Translation table | |
GC content | 48% |
IMG OID | 638255302 |
Product | expressed protein |
Protein accession | XP_569955 |
Protein GI | 58265598 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CAATTACAGA CCGTCACTGT CTCTTATACA CCATGAACCG CCCCATCTCC ACACTTCGCC TCGTTCTTTC CGCTACTCAG CCTCGCTTCG CCCCGTCACC TGCCGTCCTT CGCCCATTTG TATCCTCCAC ACGCCTCTAC GCTACCCACC ATGAAACGGC TTCCCCGCAT TCTCAATCAC AAGCCACAAG CGATCTTTTG AAGGGGCTCG GAAATAAGAC GGGAACATCT TCTGGTACCC AAGACACTGT CGGGCCATTC CCTCTTGGAG TTGGGCCCAA TGGCCGTAGG AAGACTTGGA AGTCATGGTC TGACTTGAAC ATTGGAGGAA AGCGTAAGCA TCAGTCTTGC AGTTCCAACA ACGTCTCAAC TGAAGTCTAA TACAGTGGTC CGTACAACGC AGCAGACTGG TAATCTGACT GTCATCCTTT TCGGAGGCGC CCTTTTTGTT GTCCTGACGT TTGCTCTCAC AACGGAATTG TTTGCAAAGA ACTCCCCTTC TGTGCTCTAC TCCCATGCCA TAGATATGAT CCGCGGTTCA AATGCTGTAC GTCTGATCAA CATGTTTATT CTAAACCGTA CTGACAATCC ACAAGCTTGA CGCGTACCTT CTGCCTCCTC TTAAATTCAC TCATTCCCCA CATTCCTCTG CACCCGTCAG AGGCTCTCCT CCAATCGCTC ATACCTTTAT CCGCAACCCC ACTTCAGGCA AGGATCATCT TGTTATCTCT TTCTGGATCC ATGGTAGGGC CAAAGACGAA GAAGAGACTC TTTCATGGAT AAAACAAGGT TGGAGGTCTG CTGTCGCTTG GGGAAAGGAA GGCATGGATA TGTTGGTGGG CGAAAAACCA GAAGATGTGG TAAAGGAAGA TGTGGAAAAG AAAGAGCGAG TGGTGGTTAA GAAGGAACCC GGAACGTTAT CCAGATGGTT CGGTGGGTTG AATTTGAGGT CGACTGCTGG ATCTCGGGTT CCATTAGCAA AAGAACTGCC TCCTGCTGGG ACATATACCG TGGGAGAAGC TCGAGGAGAG TATGTCAAGG TACGTTATCG TCTATCTACT CGTCAGGCTT GGCTGACTTG TGATTTTCTG CAGGATGAGG CTGGAGAGTT CCAAATGCTC TCGCTGATAG TCGACATACC ATCATCCAAG GCTTCCTACC CTGGACGAGC TGTCATCTTC CAAAGCCCCG AGGCGGAAAC CGAGGGCCTT TTAGGCAAAC GCATCCGATG ATTGTCAGCT ACGGAACGGG TAAGGACAGA ATCAGAAGTT TCTCGCAGCA ACAGATGTGT AATGCATTTG TTGTAAAAGG TTACTCTTGT CTTTCCACTC TTCGTGTAGT AAATGGGCTT CTGGCAAGTT CGCATGCTGA TGCCTCAAAT TTTAAGCGTG TGAGGAGATC ATATACTAAA TGTGAGAGCT GTGGTTTAAT TCCGGATCTT AGGAGGAAAT GTACTAATGA GAGGATGCCC AAGTATGCTG GTATGCGAGA AATAAGCAAT TGTGCCGATA AGTACAGATG ATAAATTACA ACAATGCTTG TGCTTTGGCT TTTTCCGGGC AGCCGTAATC AGATAGGAAG ACCTTTCTAT GCCATATCCT ATTTTAGCTG CTCAGAACAG ATGTGCGAAG ACGACGAGAT GTGAGAAGCA GAATAGGGAG CGAAGTCGTT TGACTATTGT TTAACGGCGT ATAGAGCCAC AAGGCGTTGT AAGTACCTTG AGTACGGATT TAAAAGCTAA CTCCAAACTT CAGCGTTGTC ATTTTACTGG GGTATATGGA CCCACCTCAT CGAGACAGCC CTCGATCATG CCTTCAAGAT CTGTAAGACG ATATCCATAA GCAACTAATT CAGGTAGAAA TGAACGGAGT TCCGAAGAAA TAATTCGAGA ATGTAGAGAG CCAGCCTGTG CCAAGGTAGG GGAGTCTAAA TAAGCCTAGG TTAGTCGAGC ATCTTCCGGT CATTGACGTA GAATGAATTT ACTCTCTGGC ATGTAGCAGG CTACTGGTAC CCCGATGTCC TGGACATATG CAGAGAGACC ACTGTGAGGC AGTCAGTTGG TGACATCGTC ATAGATGAAA CAAAACCTTA CAAGACCCCT GCCGATCTCA CACACTCACT GAGCCTAGCA GCCATCATTG AATCAACTGA TACATTCACG GTTAGTACTT AATCTGTCCA TCCCGGAATC CTGGGCTTAC TGCCATTAGC GGCTAGTGCC TTCTCGATAG AAGCATTCCA CTGGAGTAGA CAAGGGGGCA GATTTTGACT AGACGATGAT TCCTGTTAAC ATATCAGCGC TTCCCATTTG TCGGACCCAG AAAGCGGACC TACATATCCC AGACAATGCT CAACGATTAC AAGTAGACCG CCATGACGAA GCAGTCTTGC AAGGCGCTCA AGAAAAATGC CGTAGCTTTT GTACGTTCTA GCCAGACCTT TTACTTGGAT AACGTCTGAA AGTGAAATAG TCAACTTGAG GCGTAGAGTA GCGAGATACC TCCTACTGAC CAAATGAGCT CGAAGGCCAC GGCAGAGGAC GGGCAATGTC TGCAGAAGAG AAGTCCAGGT TGCCATGGTG AATTCTTTCT CCAGTATATG ACTTCCAGTC TGGCCTGGGA TGAGGCGATT AGGGGAGGAA AGGAAGGAAA AAGAGGGAGA AAAAAGGTAG AAATCTGCTT ACGCGAGAGT CACAACATCG GCAAATGGTT CAGCATTGGC TAAAAGTGCA GCCCATTGAC CTAAAGTC
|
Protein sequence | MNRPISTLRL VLSATQPRFA PSPAVLRPFV SSTRLYATHH ETASPHSQSQ ATSDLLKGLG NKTGTSSGTQ DTVGPFPLGV GPNGRRKTWK SWSDLNIGGK LVRTTQQTGN LTVILFGGAL FVVLTFALTT ELFAKNSPSV LYSHAIDMIR GSNALDAYLL PPLKFTHSPH SSAPVRGSPP IAHTFIRNPT SGKDHLVISF WIHGRAKDEE ETLSWIKQGW RSAVAWGKEG MDMLVGEKPE DVVKEDVEKK ERVVVKKEPG TLSRWFGGLN LRSTAGSRVP LAKELPPAGT YTVGEARGEY VKDEAGEFQM LSLIVDIPSS KASYPGRAVI FQSPEAETEG LLGKRIR
|
| |