| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC00780 |
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| Symbol | |
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| ID | 3256392 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006685 |
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| Strand | - |
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| Start bp | 219350 |
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| End bp | 222584 |
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| Gene Length | 3235 bp |
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| Protein Length | 737 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638255295 |
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| Product | histone deacetylase clr3, putative |
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| Protein accession | XP_569378 |
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| Protein GI | 58264444 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.568291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACTCCC CCTCCCCCCT TTGTGCTCCC CCTTCTCTCC GCCCCGCGCC AGCGCACCGC
AGGATGGCAC ACACAGCCGC CATGCACACT GGCCCGCCCC CCGCCGCCCC CACAAACGTC
GGCAACTCGC CCAGCCATAC AACCATGGCC ATGCCAGGCG CAGCAGCACG TATCGCCCGT
ACCGGCTACA TCTACGACCC TCTCATGATG CTGCACTGCA TGGAAGGCTA CATGCCCACC
GCAGAAAATG TAATGGATAA CGGCGACGGA CACCCGGAAG ATCCCATGCG GATCAAGAGG
ATCTTTACCA GGCTGGCGGA GCAAGGGTTG ATCAGGCGGA TGAAGAGGCT GGATTTTGAA
GAGGTCAAGT TTGAGCAAGT CTTGCTGGTG CATGGCGAGG AGATGTGGGA TAAAGTGCAG
GCTACGGAGC GTGGGTCCAT ATTCTCTCTT TCCAGTCCAT TGACCAGCTA CTCATCATTC
CCTCTTCTAG TGTTGAGCGA TCAGCAAATT CAAGATATGA AAGAGTACTA CGATCAGCTA
TCCCTCTACG TCTGCCGTGA GACTGCCCAC TGTGCTCGTC TTTCTGCGGG AGGTGTGATT
CAAGCATGTC GATCAGTCTG CAAGAATGAA GTGCGCAACG CCTTTGCCAT CGTACGTCCG
CCGGGCCATC ACGCAGAGCC CAACGAACAT ATGGGTTTCT GTTTCTTCAA CAACGTTGCA
GTGGCTACCA GGGAGATGCA GAGGGAAGGG TTGGCCAAAA AGGTCTTGAT CTTGGATTGG
TAAGTCCGTT TGTTCATTAG ACTGAAAACC CTTCTCTGAC CCTGTAAACA CAAAAAAGGG
ACGTCCACCA TGGTAACGGT ACACAAAGAG CATTCTGGCA TGATGGTGAT GTACTTTACA
TGTCATTACA TAGACATGAA GGAGGAACAT TCTACCCCAA CAGCGATTTC GGATCTCTCA
ACATGGTCGG TGATGGTGAA GGTGTCGGCA AGTAAGTGGT GTATTATCTT TCCGTTTATT
CAAAAAAGAG AATGTAAACG CTCATATTTG CCTGGGCCAG GTCTGTCAAC ATCCCCTGGC
CTGGACCGGG TTTCGGTGAT GCCGACTATA TCTATGCTTT CCAGCGGATC ATCATGCCAA
TAGCATACGA GTTCGACCCC GATCTCGTCA TCAGTAAATC CTTTTTTTGA CTTGCATCGA
TCCTATTGTC TTTTCAACCG TCCAGAAAAC TGACAGTCTC AACAACCCAG TTTCTGCCGG
ATTCGATGCT GCGGACGGAG ACATGCTCGG TCAATGTCGT GTCACCCCTG CAGCTTACGG
ACATATGACA CATATGCTCA GCTCATTGGC TGGTGGCAAG CTTGTCGTCG CTCTTGAAGT
AAGTCTCTCT TCCACAACCC CCCGACACTG AACCCTTTGA CTGAATCATA ACAGGGTGGA
TACAATCTCC GAGCCATCTC CGATTCCGCC CTCGCCGTCG CCCGTGTCCT CTTGGGTGAA
ATCCCGCCCG AGCTGGGCAT CATGCGAGCA TCCGAAGCGG CTACCGAGGT GGTCTACCAG
GTCGCGCTTG AACAGAGCAA GTACTGGAAG TGCATCGATG TAAAGGCTTG TGAACCGCCT
GAAGGTATGT CCTTCTCTTC TCTCCCTCCC TCCTCCCGCT TCTCATTTCA TCTTCCGTTT
AAAGTAAATG GAAACTGATA CGAAGCAATG TAGTTACCGA GCTTGAGAAT GGCACTTCTC
CCGTGTATAC AATCCCAGAC CTACTGAAAA TCCATCGCGC ACACCACATG TTTACCAAAC
ACCAGTTGTA TCAAATACCA TTGGCCAGCC AAGAATTAGA AGCTGCATTT GGCGGTCAGA
TCATCTGCAA GTGGGTCGCT TTCGTTTTTT CTATTGTCCT TATCCTTGTC TTGCCAGTAT
GAAAAGGATG GACTGACTCG ATGTGCGAAT AGTGAGAATA TGTATGAAGT TGGAGAAAAG
GGAGTGCTGG TGGTGTTTGT CCATGATTTG TGAGTCGTAG CTCCCGTTTT ATGCAAGGGG
GGAAACTGTT CTGACAATAC GAATCTTCTC AAAGTGGTAA CCTGAGAGTG GAGACCGACG
GCGCAAGGTC GACCAACATC CACCTGGCGA ACAGCTACCT TGTAAGGCGC CACCATGCTT
ATTTCGCGAG TAAACCAACA ATCTGATTTT TTTCCTCCTT TTCCAGCTCG ATACGAGCGA
TGCGGTTGTC TCATGGGTTA AAACAAAAGG CTACAACATC ATCGATGTCA ATATCCTAAA
GCAACTACCT ACCGAATACC CCGTACGTTC CTTCCCGACT CCCATTGCAA CAGCCAGCTG
TTCACTGACT CGCCCGGTCC TTCTTCCCCA ACTAAACAGG AAGGCCCCAA GATGGTCGTG
AAACAAGCCA ACGACATGGA ATCCAAATTA ATGAAGTACA TTTGGGATAA TTACATTGAA
CTGTCCGAAT GCGAAAAGGT CGTGTTCATA GGGCACGGTA CAGGCTGTCA GGCGATCATG
GATCTTGTCA ATGCGAGGGA TGTCGAGCTC AAGGTGAAGG CTGTGGTGCA AGTGGCCGGC
TTACATTCCT TGGTCAGACC AAATCCGTCA AATAAGGAAA AGTTGAGCTG GTTCAAGCAG
GTGAGTCTTT TGCATATCAA TTTTATCAAT CCAGTCATGT TTATGCTTGT TTGTTTGTTG
TAATAGTGTA ATCAAATCTA CGTGCCTGCC GAGCATGTGG TATTGGAAGA TGAAAAGGTT
AAGCGGAGAT TAGGCGACGC GGTGTTTACA TCCCGTATGT CTTTTCAACC CATCTCCCCC
CGCCCGCCCC CTCCCCGGCG TCGAGGAAAC AAATCACTGA CGAAAAAAAA AAATGACCAA
TTTCCCAATA TTTTTTCCCC ACCAGAAAAA GCAAAAGTCG TCGACGTTCT CAACGATGTC
CTTCCGCGAA TCAAGGCCTT TGTCGAATCC AAAGTCGAAG ATGGGCTTGC ACCCCGCGCG
CATTCGGGTC TGGATGGCTT ATACGGTCTA GGAGGTGCTG GTGCTGGTGG AGAGCTGGTA
GTTGTTAATG GACATGTACA TGTGGGATGA TGTAAATTAC ACCATATTTT TTGTATGTTA
ATATACATGT TCTGTCAGTG TAACTACAGT GTACGACGGA TTCAAAAAGG GGGAAAGAGT
TCGTGTCATG GTTGTACTTT TCTTTCTTGG TTTTTTTTTT TTGTGAATTG CATAG
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| Protein sequence | MHSPSPLCAP PSLRPAPAHR RMAHTAAMHT GPPPAAPTNV GNSPSHTTMA MPGAAARIAR
TGYIYDPLMM LHCMEGYMPT AENVMDNGDG HPEDPMRIKR IFTRLAEQGL IRRMKRLDFE
EVKFEQVLLV HGEEMWDKVQ ATELLSDQQI QDMKEYYDQL SLYVCRETAH CARLSAGGVI
QACRSVCKNE VRNAFAIVRP PGHHAEPNEH MGFCFFNNVA VATREMQREG LAKKVLILDW
DVHHGNGTQR AFWHDGDVLY MSLHRHEGGT FYPNSDFGSL NMVGDGEGVG KSVNIPWPGP
GFGDADYIYA FQRIIMPIAY EFDPDLVIIS AGFDAADGDM LGQCRVTPAA YGHMTHMLSS
LAGGKLVVAL EGGYNLRAIS DSALAVARVL LGEIPPELGI MRASEAATEV VYQVALEQSK
YWKCIDVKAC EPPEVTELEN GTSPVYTIPD LLKIHRAHHM FTKHQLYQIP LASQELEAAF
GGQIICNENM YEVGEKGVLV VFVHDFGNLR VETDGARSTN IHLANSYLLD TSDAVVSWVK
TKGYNIIDVN ILKQLPTEYP EGPKMVVKQA NDMESKLMKY IWDNYIELSE CEKVVFIGHG
TGCQAIMDLV NARDVELKVK AVVQVAGLHS LVRPNPSNKE KLSWFKQCNQ IYVPAEHVVL
EDEKVKRRLG DAVFTSQKAK VVDVLNDVLP RIKAFVESKV EDGLAPRAHS GLDGLYGLGG
AGAGGELVVV NGHVHVG
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