Gene CNC00680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC00680 
Symbol 
ID3256297 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp194979 
End bp197496 
Gene Length2518 bp 
Protein Length768 aa 
Translation table 
GC content52% 
IMG OID638255285 
Producthypothetical protein 
Protein accessionXP_569360 
Protein GI58264408 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAAACAATGT CCGACGCCAC TCTGTTTCTC CGCAAAAACA AGGACAAACA GCGTCGCAGG 
AACGTCTCTG GCGCTTCTCG AATCGCTAGC ACCAGCAACT CATCGTTGGC CTCGCGACCT
GGCGCCTCAA AAGGCCAACC TGTCGCTGGT CCGTCATCCT CTGGAGCACC ATCTTCTGCC
GCTCCTTCTC CATCATCTGT TTCAATCAAA CCAGAACCGG ATAGCTCGAA TAATCCTAAT
ATTACGGAAA TCAAAATCTT CTCCACTGGT TCTAACAGCG CATTGCGATA CAATCTCATG
CGCCTCAACT CTGTTAAGGA TGTTGATCCC ACACAGATAA CAGCGCCTGT ATTGATGAAC
AGGAAGAAAC CAGGACCAAA AGATCCCCCT ACTTTTGCGC TGGACGAAAA CGGCAAAATC
GTGGGGCGGT ATGTATACGA TGAGGAAGGT AAACCTATCT TGGATGAGGA AGGCCAGCCC
GTGGTTGAGA GGAAGGAAGT GGTCGATATG TCTCTTGTGG GACAAGCGCC TGGCGGTGGC
AGGAAGAAGA GGGTCAAGAG GGGCACAAAG GAGGTTTTCC ACCAAGATAT CGAAATCATG
CGTCTTCGAC GAGAAGAAGC TCTCCCTTGG GTGCTGGAGA GTGGCAACCC CCAGGACAAA
CCTGCCCAAC CGGAACAATG GGTAGGAAGG ATGTTAGAAC AAGGACAGCT ATCTACTGTG
CTTCTGTCGA ATGACGGGAC ACGAGATGGG TTCGAAATGA TGCCATTGGG CAGATCCTAC
AAATTTGAAC CGGCTCGGCC TTTTAAGCCT TTAGACTCCG ATGCTGCTAA CAAACTGGTG
AATATCTTGT TTTGTCCAAT TATGATGTTC ATATTTGTTG ACATGTTATA TATCCAAGTT
TGAGTTGCAG GCAAAGAACA AGATTCACGA TCGATGGGCC TTCCGCCCTG CAGATAATCA
AAGCGGGGAA GCATCCTCTG CTTCGACGCC TATTCAAGTC AAGGCGGAGC CAAACGAGTT
GGAACAGCGC GCATCCAGAA TGGAGACGAG GATCAAGATG CACAAGGGCG TTACTGTCGA
CCGGAAGGCC AAGGTTGAGC GGTACGAGGA TGATTATCAG CGTGAAGGGC ATCGAGTGGA
GCGTGTATGT CCAAAATTTT CCAAATACAC CTTCCTTTCA GGTTGTTGAC AGTATGAATA
GGGTATGGAG GGTGGCGTGG ACGAAGAGCT CGATTTCGAT GAGGCGGAGG AATTTCAAGA
TGACGACGAT AACAATACAT TCTACCGCGA CGCGCAAGAA GAGGAAGAGG CCAGAGAGTT
GGAAGAACGG CTCAAAAAGG AGTTCCGTGT GGCTAATGCC AACGTCGGTG ACCGGCCTCA
GATTGACGCG GAGGACGACG AAGATGATCT TTTTGGAGAC AAATCACTTG ATGACGAGGG
TAAAAAGTTG AGGAAGATTA TGAGAAGGAG GATGAGGGAA AATGGAGAGG ATTATGATAT
AGATGATGAC TCGGTCAGTC GTGCCGTATG ATGTCTTGTC CGATTTACAT GATGCTAACA
TTCTACATTC AGGACTCTGA TTCGGATGAT GAATCTACAA CCAGCACTCA GAACAAGGAA
AAAGAAAAGG AGAAGGACAA GGAAAAAGAA AAAGCCAAAG AAAAGGATTC TTCTCGCAAC
CCTTCTCAAC CGCCTTCACG TCCCAGCTCT CGTCCCCCTA CTGCTCGCAC ATCGTCACCT
TCCGGGTCTA ATCCTCGCTA CCCCAGTCCG AAAAAGGGCA AAGCCTCCAC CGCCCCTCCT
CCAGTCTCTG GCGCGTCTCT CATCGCCCAG CGCGCCACCT CGCGAGGAGC TAGCCCTCGT
CCTTCCACCC ATGGAGGACA TGTTGCCGGT AGAGCCAGTA GCCCTCTTGG AAGGGTGCCC
AGTCCCGCTG AAGGTCGTGG TCCTGGTGTC ACGGGTCAGA GTCAGCCTGC GTCGAGGGCT
ACAAGTCCCG CGGTCAGAGA GAGCAGTCCG GCCTCGGGAG GTGCTGCAGC CACCGGAGGG
GCCAGTCCTG CTTCCGGAGG GCCATCAACG AGGGACGTAT CTCCTGCTCC TCCTGCTGGT
AGACCGTCTC CGAGAAAGGA AAACGCTGCA GTCTCAACAT CGTCTTCGTC TGCAAAGCGC
AAGTCGTCAC CTTCCGTTTC TACTCCATCC GCCGATGCAC CTCCCCGACC GAAAAAGCAC
AAAAAGACTG GTTCCCTTAC CCCAGCGCCG GCACCGGAGG ATATTCCTCC CTTCTCTGGT
ATGATCACCA AGCAAGACGT TTTGGGTTGG TTCCAGCGAA ACAAGAAGAA GGCTGTTCCT
ATGAATGAGG CGATTGGAGC GTTTAGAAAG AGAATTGTTG ATGCCGGGCC TAATAGGGAT
GCCAACCAGA AGTTGTTCTT GGGGTGGATC AGGATGGTGG CAGATCAGGA AAACGGGAAC
TTGAGTTTGA AGCCCGAGTT TAGACAGTAA TCATCATGCA GAAACACTTT ATCTATCG
 
Protein sequence
MSDATLFLRK NKDKQRRRNV SGASRIASTS NSSLASRPGA SKGQPVAGPS SSGAPSSAAP 
SPSSVSIKPE PDSSNNPNIT EIKIFSTGSN SALRYNLMRL NSVKDVDPTQ ITAPVLMNRK
KPGPKDPPTF ALDENGKIVG RYVYDEEGKP ILDEEGQPVV ERKEVVDMSL VGQAPGGGRK
KRVKRGTKEV FHQDIEIMRL RREEALPWVL ESGNPQDKPA QPEQWVGRML EQGQLSTVLL
SNDGTRDGFE MMPLGRSYKF EPARPFKPLD SDAANKLFEL QAKNKIHDRW AFRPADNQSG
EASSASTPIQ VKAEPNELEQ RASRMETRIK MHKGVTVDRK AKVERYEDDY QREGHRVERG
MEGGVDEELD FDEAEEFQDD DDNNTFYRDA QEEEEARELE ERLKKEFRVA NANVGDRPQI
DAEDDEDDLF GDKSLDDEGK KLRKIMRRRM RENGEDYDID DDSDSDSDDE STTSTQNKEK
EKEKDKEKEK AKEKDSSRNP SQPPSRPSSR PPTARTSSPS GSNPRYPSPK KGKASTAPPP
VSGASLIAQR ATSRGASPRP STHGGHVAGR ASSPLGRVPS PAEGRGPGVT GQSQPASRAT
SPAVRESSPA SGGAAATGGA SPASGGPSTR DVSPAPPAGR PSPRKENAAV STSSSSAKRK
SSPSVSTPSA DAPPRPKKHK KTGSLTPAPA PEDIPPFSGM ITKQDVLGWF QRNKKKAVPM
NEAIGAFRKR IVDAGPNRDA NQKLFLGWIR MVADQENGNL SLKPEFRQ