Gene CNC00480 details

Gene Information

• Locus tag: CNC00480
• ID: 3256719
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006685
• Strand: +
• Start bp: 134106
• End bp: 136254
• Gene Length: 2149 bp
• Protein Length: 564 aa
• GC content: 47%
• IMG OID: 638255267
• Product: conserved hypothetical protein
• Protein accession: XP_569338
• Protein GI: 58264364

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.106158
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAGCGACGCA GTGGAAGTCA GCATAGGCCA CAGCAACATC GATAGCAGCT ATAATATATT 
GGCCGGAAAG GTCAATTTCA TCAAATCTAC ATACTCAGGA ACATGTCTGG CGGATACGAC 
TTTTCCCATC TCTTTCCAGC CAACACCCTT GCCTTTTCCC CTGGAACGAC TTTTTTGGCA 
GTAGCACATC AAAACCGGAT TATTGTCAGA TCAACGTCTA CTCTCCAGGT AGTTCGAACA 
TGGGAGTGTA CTTTACCTTC TGAATCAACA ATATTTCGCT CAAAAGAACC CTGTGTTGCC 
TCGTCTGCAA CAGAAGCCAC ATCAGAAGCT TTTATCATCG ACACATTACA ATGGTCAGGT 
GACAGTACGT ATCTTTTGGT GCATTCCAAG GAAGCAAAAA TGGCATGGGT ATACGGTGTA 
GCTCAAGAAG GAGAAGCAGC CCATGTCGGC GGAATGGGAG TCGAGGGCTT ATCCAAGGTA 
GAGTGGGGTA AGGGGAATAG AGAAGTGCTG GCATGGACAG AGATTGATGT AAGCCACTTT 
AAGCTCGGAT CAATTGTTTA CTGACGCTTA TGCAGTCGAG GCTCTATATA TACAGTCTAT 
CGTCTGGGGA AACCAGACTC ATTCAGAACG TCAAGCCCAC CGCCGATGGT AAGAGAACAA 
AACACTGCTT CATAGACATC AGCTAAAGGC CACCCCAGGA TACACGTATT CACCTGATTC 
TCGGTACCTT GCGGTGACCG AAAAACATCT TGGAAAGGAT TATATAGGAG TGTATGACAT 
CCTTGATGGC TATAATCTTC TGAGGGTAAG CAGAGGTGAT CGGGCCTAAA GAGCAAAGAG 
CTAATTTTAA GCAGCACTTC CCACTTCTGA CTGTCGATGT ACAAGGTGTT TCGTGGAGCC 
CTTGTGGCAA ATATATTGCA GCATGGGACT TACCTCTATC TGTAGGTCAT ATTCATCTGC 
ATGATCCAAC CCTGCTAACT CCGAAGAAGT ATTCCCTTCA TATCCATTCC GCTATAGGAC 
CTCACCTAAC TCACCTCAAT CCCTCGTCCC CAGCCTTTTC CCTTGCACCA AATGAAACAC 
CAGGTCTTGG TCTTCGCACC CTTGCTTGGG CACCAGGAGG ACGTTGGATA GCTGTCGGTG 
GATGGGATGG GAAGGTCAGG ATAGTTGAAA GTGATGGATG GAGATGTGTT TGTGTGATAA 
CTTGCGGCAC CAGAGCCAAT AAAACTGCAG TGGGTTAATT TATTGATGGT ATTTATTTTG 
GCGCTTACCT GGCTCTCTCT CCTAGGCTGT CTGGAGAGAG CCAAACGATT GGTTAAGAGA 
TACCAGAGGG CGGGGCATCG TACAATGTGA GTAACCGACA TTTGCATTTC AAGAAGGTCT 
CTTAACGTTC TTTAGTCGAC CGACAGCCAC ATCCCGTTAC TTTCCCTGCT CTCCGCCCTG 
ATATCACTAA GCCATACCCT CGTATGGGTA TATCACAACT CACTTTCGAT CGGGAAGCTA 
CTCTTCTCCT CATCCGCCTT GATAGTCAAC CAAACGTTGT ACACATTTAC AGCTTCCTCC 
CCACACCCAC ATCCGAACAG CCTACCATAG CCCACATTGT CAGTTCTATT TTCTCCAGAG 
AGATTAAGAA AGCCAAATGG AGTCCAGTGA AGAGCAAACT TAGTGTAGTC ACAAGAGGTG 
GAGGGGTTTA CTTTTGGGAT CGAGAGAGTG GATGGATTGA AGAAGAGAGC GGCGGCAGTT 
TTGAATGCGA TAGAGAAATC GATGTTGCCA CAGGTGGTAT GATGGAAGGT GTGGGCATCC 
CCACTCGTAA GTCTCATAAA CGATATTTCA GAAGGCAAAC TCACTTCAAT GCACCTAAGG 
GGCAGAATTT TCGGCGCTTG ATATTCACTG GTCACCCGAT GGCAGGTCTT TAGCCATACG 
GGACAGATAT CATTTCTGCT TGTTGTATGA TGAAGATACT GGAAACCTAG ATGATGACGA 
GCAAGAAGGT GAACGTTCAG CGCTAATGTG GAATGAGCAA GGTGAAGGGT TGACAGATGT 
GCTTGAGGAA GAAGGACACA TCAGCTTAAG CGAGGGTTTA CCAAGTCGAG AGCAGTTTAT 
CTGGGAAAAA AAGCGTTATG CGACGGTTAA AGCAGCAGTA TATAGTTGA 

 

Protein sequence

MSGGYDFSHL FPANTLAFSP GTTFLAVAHQ NRIIVRSTST LQVVRTWECT LPSESTIFRS 
KEPCVASSAT EATSEAFIID TLQWSGDSTY LLVHSKEAKM AWVYGVAQEG EAAHVGGMGV 
EGLSKVEWGK GNREVLAWTE IDSRLYIYSL SSGETRLIQN VKPTADGYTY SPDSRYLAVT 
EKHLGKDYIG VYDILDGYNL LRHFPLLTVD VQGVSWSPCG KYIAAWDLPL SYSLHIHSAI 
GPHLTHLNPS SPAFSLAPNE TPGLGLRTLA WAPGGRWIAV GGWDGKVRIV ESDGWRCVCV 
ITCGTRANKT AAVWREPNDW LRDTRGRGIV QFDRQPHPVT FPALRPDITK PYPRMGISQL 
TFDREATLLL IRLDSQPNVV HIYSFLPTPT SEQPTIAHIV SSIFSREIKK AKWSPVKSKL 
SVVTRGGGVY FWDRESGWIE EESGGSFECD REIDVATGGM MEGVGIPTRA EFSALDIHWS 
PDGRSLAIRD RYHFCLLYDE DTGNLDDDEQ EGERSALMWN EQGEGLTDVL EEEGHISLSE 
GLPSREQFIW EKKRYATVKA AVYS