| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC00460 |
|---|
| Symbol | |
|---|
| ID | 3256457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | + |
|---|
| Start bp | 130466 |
|---|
| End bp | 132418 |
|---|
| Gene Length | 1953 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | 638255265 |
|---|
| Product | SNARE binding protein, putative |
|---|
| Protein accession | XP_569336 |
|---|
| Protein GI | 58264360 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.89668 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTTCTCCTTC TTTAGCCTAC ACTCCTGTAT CACTGCCAAC CATGAGACTC ACGATTATTG
CCCCAGACTC GGTTCATGAG CACGAAGTGT CCCCTTCCTT GCTCATCCAA GACATCATCA
ACATCGTTGA GGCAACTGTA AGTCAGCTAT GATGACTGTC GTCAGCCTCT GCTTTGTCAG
CATAGTACAA GCTTTGCAGG CCGTGTGGCG GACCTCACAA ATGCAATATA TTGCTATGCT
ACGACGAAAA GCTGCTGACT GGTCGTATAG GCCGACCTTC CCCCGGCTGT TATTGTTCTC
ACAAGTGACG CCGGTACACC ACTCACGGAC CCCACAAGAA CTCTCGAAAG CTATGGGTTA
AATGGAGAGA CCGCCACCAT CTTCCTTACA CCTACGTAAG TCTCACGTTC ATGCTTCTTC
TGAAAGTGGT GATTGTCCCG CATATCGCCC ATAGAGGTTG CAAGTAAAGC TGACCAACCT
TTTTTGATAT TGCCGCCAGA GGACCACCCG TCGCTTCTTC GTCTTCCATT CCATTCCCTG
ATGCAGATGC CGACATTGAA AGGATGCGTT TACAAGCGCT CGGAAATCCT TCTTTGATGA
ATGATTTGCG TGAGGTACGC GAAAGCCTTG CATATGCCAA GGCTGAATGT TCGCTAACGG
TGGACTCTAT TTTGTTCCTT TTAGCGTGAT CCGGAAACCT TTGCCGCTAT TCAAGGGGGT
ACTCAAAGCT TCAAAAAAGC CCTCCAACTG GCGCAATCAA GACAAAGAGA TGCCGAATTC
GAAAAGCAAC GCCAGATTGA AGTGAGTAGA CAGGAAGGCT AAGGAAATTC TTATGGCATT
GCGGTCGAGT AACTGACGCC TTTGCAGGCA CTCAATGCCG ACCCTTATGA CATTGAAGCT
CAGAAAAAGA TTGAGGAAGC AATTCGGATG GAGGCCGTTT TGGAGAATAT GCAGCACGCT
ATGGAATATT CCGTGAGTGC GGTGAGGATG CCAAGACGGC TGGCTGTTGC TGATTCGAGC
TTAGCCTGAG TCGTTTGGAA ACGTGACCAT GCTGTATATC AATGTGGAAG TAAATGGTCA
TCCTGTTAAG GCATTCGTTG ATTCTGGTGC ACAAACAACG ATCAGTGAGC CTTCTTGTCT
ACATTTGTCC AAAGCTGAAC TGACTTTTTG TTCAGTTTCC CCTGAATGTG CCGAGCAATG
TGGAATCATG CGCCTGCTTG ATACTCGTTT CGCGGGTATG GCCGAAGGAG TAGGAACAGC
TCGTATCCTC GGTCGTATCC ACTCTGCCCA AATTAAGCTC GGCTCACTCT ACCTCCCTTG
TGCATTCTCC GTCCTCGAAG GCCGTTCTGT CGACCTCTTA TTTGGTCTTG ACATGCTTAA
ACGCCATCAA TGCTGTATCG ACCTCTCCAC GAACACGCTC CGGATAAATA ACACTGAAGT
ACCCTTTTTG TCGGAGCACG AGCTGCCTGA CAAGGCGAGA AGACGTGGGG AGGCGCAAGT
GGCCGGGGAA ATGGGTGATG CGGCAGGGCA AGGCGTGAAA GCGGGTGTGG CGAGTCCGAA
GATTGGGAAG AAGACGTTTC CGGGAGAGGG GCATGCGCTT GGTGCGGGCA GCTCGACTGG
ACCAGGGACG GCTACGGGGA GTGCAAGTGC GACAGGTGCA AGGACTGGGG GGACTGCAAG
TGTCCCCTCG CCTTCAAATA GGTGGAAAGA GGACGATATT CAAACGGTGA GTCGTTTAAT
GCGATATGTA GCATTTGTCC TAAGACTCTG AATCGTAGCT TGTGAACCTG GGTGCCCCTC
GAGCGCAAGC TATACAGCTA CTTGAAGCGT CAGGTGGAAA CGTGGATGTT GCTGCTTCTA
TGCTCTTTGG TTAGATAGAC GGCCTTATAT ACAATTGTCG CCTAGACATA CATACATAAA
TCAAACGTAC AATGCGATCA GTGATCAACG ACA
|
|---|
| Protein sequence | MRLTIIAPDS VHEHEVSPSL LIQDIINIVE ATADLPPAVI VLTSDAGTPL TDPTRTLESY
GLNGETATIF LTPTGPPVAS SSSIPFPDAD ADIERMRLQA LGNPSLMNDL RERDPETFAA
IQGGTQSFKK ALQLAQSRQR DAEFEKQRQI EALNADPYDI EAQKKIEEAI RMEAVLENMQ
HAMEYSPESF GNVTMLYINV EVNGHPVKAF VDSGAQTTII SPECAEQCGI MRLLDTRFAG
MAEGVGTARI LGRIHSAQIK LGSLYLPCAF SVLEGRSVDL LFGLDMLKRH QCCIDLSTNT
LRINNTEVPF LSEHELPDKA RRRGEAQVAG EMGDAAGQGV KAGVASPKIG KKTFPGEGHA
LGAGSSTGPG TATGSASATG ARTGGTASVP SPSNRWKEDD IQTLVNLGAP RAQAIQLLEA
SGGNVDVAAS MLFG
|
|---|
| |