Gene CNC00440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC00440 
Symbol 
ID3256224 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp125733 
End bp126605 
Gene Length873 bp 
Protein Length168 aa 
Translation table 
GC content47% 
IMG OID638255263 
Productconserved hypothetical protein 
Protein accessionXP_569334 
Protein GI58264356 
COG category[R] General function prediction only 
COG ID[COG1418] Predicted HD superfamily hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0533687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCT CTGCCTACTC TGACCTCATC GGTCGCGCAG AAAAGCTCGT AAAAGCTCAC 
ATGGCCAAGT ATGTCATCCG TTATTACCCC TTCGTTGTTG CTAATGGCAT TGAACTATCT
GTATTAGATA TGACCCTTCG CATGACTGGG CACACGGTGG GTTGACTGTG CACTGTCTCC
AATGTCATGG GACTAATCGT CCTTTGATAA TTAAAAAGTG GACCGAGTAC GAAAGATGGC
GATGACAATA GCAAGGTCCA TGATGGACAA TGGTCCCGAT TTGCTGATAG TAGAATTGGC
TGCTCTCTTT CATGATCTTT CTGGCGAGTA TTTGGCCGCT GCAACACACG CATGGCTATA
CTAATATTTT CTGCCCCTTT TTCAACTATA TAGACTGTAC GATTGATTTA CATCGCATAT
GGCAGTAATA GCATCTAACA AATCTAACAA ATCACCTTTG CAGACAAATA CGCAAAACCA
GGATCCCCAA CTCTCCCCGA CTTGCTCTTC CCCATTCTCC AGCTTCAGAT CCCCGACGAA
ACCATCGACC GTATCCTCTC CATCATCCCT GCCGTCTCTT ACACTGCTGA AACCGCTCTT
CTGGCAGCTG GCAAATGGAC ATGGCAGAAA GACTGTTTGG AACTACATGC TGTCCAGGAT
GCAGACAGAC TGGACGCTAT CGGTGCGGTT GGTATATTGA GGTGTGCAGC TTATAGTGGA
GCTACGAAAC GGGTATTGGT GGAAGATGAA GATACTGGAG GCAAGAGTGC AGAAGCGCAT
TTTGAGGAAA AGTTGTTAAA AGTGAAGGAT AGAATGAAGA CCGCTTTTGG GAAAGAAGAG
GCTGAGCGGA GACATCAAAC TGTGGGCATT TGA
 
Protein sequence
MTTSAYSDLI GRAEKLVKAH MAKYDPSHDW AHDKYAKPGS PTLPDLLFPI LQLQIPDETI 
DRILSIIPAV SYTAETALLA AGKWTWQKDC LELHAVQDAD RLDAIGAVGI LRCAAYSGAT
KRVLVEDEDT GGKSAEAHFE EKLLKVKDRM KTAFGKEEAE RRHQTVGI