| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC00400 |
|---|
| Symbol | |
|---|
| ID | 3256209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | + |
|---|
| Start bp | 116053 |
|---|
| End bp | 116952 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | 638255259 |
|---|
| Product | cytoplasm protein, putative |
|---|
| Protein accession | XP_569330 |
|---|
| Protein GI | 58264348 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3265] Gluconate kinase |
|---|
| TIGRFAM ID | [TIGR01313] carbohydrate kinase, thermoresistant glucokinase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0490868 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCCA AGCCTCAACA AGAATTGGCG GTACCCACGC ACTTGCCTGA CCCGGTCCTT
ATCATCGTCA TGGTACGCCT TTTTGTTTGT TCTCTCAGCC TTCATGCAAA AACTAAAGTT
TTGCTATAGG GCCCTGCATC ATGGTGAGCC TTTCAAAGGC ATTTCCGCTT TGCCTTTACT
GACCCGGCCC CCCCGCTCCA CTCTCAGCGG TAAATCCACC GTCGGCCAAG ACGTCGCCGA
TCATTTCCAC ATCCCTTTTA TCGACGGCGA CTCTCTTCAC CCCAAATCAA ACATTGCCAA
AATGTCCTCC GGTACCCCTT TGACAGACGA GGACCGTCTC CCTTGGCTTG CACTCATCCG
TTCAACGGCG GAGAAGATGT GTAAAGAGCA GTCGGACGAG ATTGCAGGGA AAACCAGGAG
CGAGGAGGAT GGTGGGCTGG GCAGGGCGGG AGTGGTGATT GCCTGCTCGG CTTTGAAGAA
GTGGTATAGG GATATATTGC GAGGGGTTGT CAAGGCTGAT CCACCTCCTG CTGAGGATCT
TGTGAGTATT GCGTGTTGCT CGCTCCATTC CACTTCTTAT TTTGTATGAC ATCAACCCCT
GGCAAATGAC TTATTTACAA AACATAGAAT GACGCACTTC CCGACGATGC TCAAGTCCCA
GCGACAGCAT CTCTCAAAAC GTACTTTGTC TACTGCTACG GTACCCCCGA ACTCCTCAAG
CAACGTATCG CCTCTCGAAA GGGCCACTTT TTCGGACAAC AGATGCTCGA TAGCCAACTT
GCGGTATTGG AAGATCCGTC TGAGGAGGAG GGTGTGACTG TGGCGAACAT AGATGGGACG
AAGGAGGAAG TTGGGGAGCG GGCGGTTAAT GGGATGAAGA AGCTACTTGG GATAAATTAG
|
|---|
| Protein sequence | MSSKPQQELA VPTHLPDPVL IIVMGPASCG KSTVGQDVAD HFHIPFIDGD SLHPKSNIAK
MSSGTPLTDE DRLPWLALIR STAEKMCKEQ SDEIAGKTRS EEDGGLGRAG VVIACSALKK
WYRDILRGVV KADPPPAEDL NDALPDDAQV PATASLKTYF VYCYGTPELL KQRIASRKGH
FFGQQMLDSQ LAVLEDPSEE EGVTVANIDG TKEEVGERAV NGMKKLLGIN
|
|---|
| |