Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC00400 |
Symbol | |
ID | 3256209 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | + |
Start bp | 116053 |
End bp | 116952 |
Gene Length | 900 bp |
Protein Length | 230 aa |
Translation table | |
GC content | 52% |
IMG OID | 638255259 |
Product | cytoplasm protein, putative |
Protein accession | XP_569330 |
Protein GI | 58264348 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3265] Gluconate kinase |
TIGRFAM ID | [TIGR01313] carbohydrate kinase, thermoresistant glucokinase family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0490868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTCCA AGCCTCAACA AGAATTGGCG GTACCCACGC ACTTGCCTGA CCCGGTCCTT ATCATCGTCA TGGTACGCCT TTTTGTTTGT TCTCTCAGCC TTCATGCAAA AACTAAAGTT TTGCTATAGG GCCCTGCATC ATGGTGAGCC TTTCAAAGGC ATTTCCGCTT TGCCTTTACT GACCCGGCCC CCCCGCTCCA CTCTCAGCGG TAAATCCACC GTCGGCCAAG ACGTCGCCGA TCATTTCCAC ATCCCTTTTA TCGACGGCGA CTCTCTTCAC CCCAAATCAA ACATTGCCAA AATGTCCTCC GGTACCCCTT TGACAGACGA GGACCGTCTC CCTTGGCTTG CACTCATCCG TTCAACGGCG GAGAAGATGT GTAAAGAGCA GTCGGACGAG ATTGCAGGGA AAACCAGGAG CGAGGAGGAT GGTGGGCTGG GCAGGGCGGG AGTGGTGATT GCCTGCTCGG CTTTGAAGAA GTGGTATAGG GATATATTGC GAGGGGTTGT CAAGGCTGAT CCACCTCCTG CTGAGGATCT TGTGAGTATT GCGTGTTGCT CGCTCCATTC CACTTCTTAT TTTGTATGAC ATCAACCCCT GGCAAATGAC TTATTTACAA AACATAGAAT GACGCACTTC CCGACGATGC TCAAGTCCCA GCGACAGCAT CTCTCAAAAC GTACTTTGTC TACTGCTACG GTACCCCCGA ACTCCTCAAG CAACGTATCG CCTCTCGAAA GGGCCACTTT TTCGGACAAC AGATGCTCGA TAGCCAACTT GCGGTATTGG AAGATCCGTC TGAGGAGGAG GGTGTGACTG TGGCGAACAT AGATGGGACG AAGGAGGAAG TTGGGGAGCG GGCGGTTAAT GGGATGAAGA AGCTACTTGG GATAAATTAG
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Protein sequence | MSSKPQQELA VPTHLPDPVL IIVMGPASCG KSTVGQDVAD HFHIPFIDGD SLHPKSNIAK MSSGTPLTDE DRLPWLALIR STAEKMCKEQ SDEIAGKTRS EEDGGLGRAG VVIACSALKK WYRDILRGVV KADPPPAEDL NDALPDDAQV PATASLKTYF VYCYGTPELL KQRIASRKGH FFGQQMLDSQ LAVLEDPSEE EGVTVANIDG TKEEVGERAV NGMKKLLGIN
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