Gene CNC00330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC00330 
Symbol 
ID3256141 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand- 
Start bp99183 
End bp99931 
Gene Length749 bp 
Protein Length140 aa 
Translation table 
GC content50% 
IMG OID638255252 
Productbud site selection-related protein, putative 
Protein accessionXP_569411 
Protein GI58264510 
COG category[R] General function prediction only 
COG ID[COG5112] U1-like Zn-finger-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.774468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCGACATGGG TAGATTAAGA CGTTCCAGGT ATGTCTCGGT ATACAGCGTC TTCAATGGCT 
TTTAAACTTT GGCCTAATAT CTCTGTAGGA CCCATCACGC CCGTCGAGAC GTGCACCGTG 
CTGCTCGTAC CCGTGCTCGA GTAAAGGATC TCGACCAAAT CGAAACAGAC TTGCGTCCCC 
AGAACAGAAA CAGGCTTGAG AAGCAGCCTA TTGATGAGGA CAAGCCTGGA CTGGGTCAAC 
ACGTAAGTTT CGGTTACCTT GAGGATGTAA AGGTAGGTGT GCTGATGTGA CTCCAGTACT 
GCGTCGAATG CTCCAAGTAC TGTGAGACCG CTGTTGCCCT CCAGTCACAC TTGAAGAGCA 
AGGTTCACAA GTACGCACTT TCCTTTCCCA ACCATCATTA TTTTGAACTC ATCAGTTCTT 
CTCTAGGCGC CGATTGAAGG AGCTCAAAGA GGGCGCTTAC ACTGTTGACG AGTCTGAGCG 
AGCTGCTGGC TTGGGAACCG ACAACAAACA ACGTGGTGTA GAGGATGTTA TCAAGCGCTT 
CGATGGAATA AACAGCAGTG CTGCCGGTCC TTCGATTGTT GCTCAACCTC AAGCTTAAGC 
CAGCCTTCCA GGAAGGACTT TTGAGAGAGA CGAAAAGTGG TGACTGGCGT TACGGCCGTG 
GGGAAGGTGG TCTCCAGGTG GACAGGGAAG TGCCACCGTT CTATGTTGTA TACTAGATGA 
TGGCATCATG TTATGTTTAG ATGGCTGTT
 
Protein sequence
MGRLRRSRTH HARRDVHRAA RTRARVKDLD QIETDLRPQN RNRLEKQPID EDKPGLGQHY 
CVECSKYCET AVALQSHLKS KVHKRRLKEL KEGAYTVDES ERAAGLGTDN KQRGVEDVIK 
RFDGINSSAA GPSIVAQPQA