Gene CNC00290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC00290 
Symbol 
ID3256600 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp84908 
End bp86961 
Gene Length2054 bp 
Protein Length636 aa 
Translation table 
GC content51% 
IMG OID638255248 
Productmultiple drug resistance protein, putative 
Protein accessionXP_569405 
Protein GI58264498 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACACCA CCAGCGATTC TACTCAAGCG AGCGACGGCA AGCCTCTCTC ATCTTATACC 
CTCAGACGGT ATCCCTGGCG ACCTTATGTT GTACCCTTTG ACGATATCGT CGGGAAAAAG
TACCCTGGTT CCGGCACAAA CGAAGATCCA TATATCGTAG ACTGGCTGCC CAATGACAAG
GAAGATCCTC AACAGTGGCC TGGCACTTAT AAATGGTTTA CCGTGAGTTA TGCGTCTGGT
ACACACGATT CGCTTTTAAC GTCTATTTAC AGATCTTCAT TGCCAGTATG ATGACTCTCG
CGGTGGCCTT GAGCTCTTCT GCATACTCTG GAGGTGTGAT TAGTATAATG GAGGATTTCG
GTTCTAGCAG AGAGCTTCTC ATTGCTGGTA TTTCCCTCTT CGTCCTTGGG TTTGCCTTTG
GTCCGCTGTA AGTTGCCCCA TTCGAAGCGA AGACTATGTG CTTACCATTT CAGATTATGG
GCCCCATTGT CAGAGTTATA TGGCCGACGT TGGATCTACA TCATCTCCTA TGCTCTCCTC
ACCTTATGGT CCGGCGCCGC TGCAGGCGCT CCGAACGTCG GCGCCCTCCT CGTCTTTCGT
TTCTTTGCCG GCTTCTTTGG CTCATCACCT CTTGCCAACG CAGGTGGTAC TATCAGCGAC
GTCCTTGATG CCAACCAACG AGGTCTCGGC ATGGCTCTAT TCGCTGCCGC CCCTTTTCTT
GGTCCTGCAT TGGGTCCTAT CACGGGTGGT TTCCTTGGTC TGACTTCCGG ATGGCGATGG
ATCGAGGGAT TCTTGACCAT TCTTAGTGGT GTCCTGTTTC TCGTGGGCAT TGGATTCGCC
AGCGAGACAT ATGCTCCCAC TATTTTGAGG CGGAGAGCTA AGCGACTAAG CAGAGTCACT
GGCGATGTCT ACAGATTTAG GGCCGATGCC AAGAAACCTC TCGATGCAAT GGCCTTGTTC
AAAGCGAGCT TGATTCGTCC TTGGAAGTTT CTCTTCCTCG AGCCTATTGT TACTATCCTT
AGTATCTACG TTGTGAGTTA GTTCCCTCGT TCGTGCGAAT CTCTGCTCAT CAACCATAGG
CGCTGCTTTA TGGTATTCTC TATCTGTTTT TCGCAGCCTA CCCTATCATC TTCCAAGAAG
GTCGTGGCTG GAACACTGGC GTTGGAGGCC TCGCATTCCT TGGTGTACTT GTAGGCACCA
TCATTTCGGT CGCCGTCTCT ATTCTAGTGG TCAATCCGCA ATACGTCAAG GTCGCTAATA
AGAAAGGTGG CCGAGCAGCT CCCGAAGATC GTCTACCTCC TGCCCTGTGG GGTGGAATCC
TCATCGTCAT CGGTCTTGCC GGTACGGCAG CCACTGATGG TCCCAATGTC CACTGGATTG
CCCCTATCAT CTTCGGTGCC CCTTTCGGTT GCGGTATCAT CATCGTCTTC TTATCGATCA
TGGGTTACCT CGTCGACAGT TACACTATCT ACGCTGCATC TGTTCTTGCC GCCAACTCTG
TGCTTCGATC CCTCTTTGGC GCTGCGTTCC CACTATTTAC AACCCAAATG TTCGATAAGC
TCGGCCTGCA TTGGGGTGTT GCCTTGCCCG GTTTCCTGTC CTTGGCTTGC GTCCCTTTCA
CTTGGATATT CTACAAGTAT GGCGCTGCTA TTCGAGCCAA GTGCAAGTAC TCTGCCGATG
CTGAGCGACA GATGGAGATG ATCATGGCTG CTCGGATGGC TCAGTCCAAG CAGGAAGACG
AGGAGGCTAG GGCTGAGGGT AAGGAGGTTA TTTATCGCGC AGCTAGCCGA CCCGAAGGAG
ATGAATCGCA GGACGTCCAA CCTTCTGAAC AAACAGGCGG TTTAGGAAGG AGTCAAAGCA
AAAGAAGCCA ACATTCCGCC AGTGCTGGCC AGTCTGGTAA TGGTGCACCG TTAGACAGGG
TCTCCACACA CCTTCATCAC GAATGGACTG TATATGAGGC TCTTGCCAAC AGAGATGAGA
ATGATTTGGA TGATGATGAA CGGATCAGAC TTGAAGGTCT TCGTCGGACG TTTGGGGATC
GATCAGAAAA GTAG
 
Protein sequence
MYTTSDSTQA SDGKPLSSYT LRRYPWRPYV VPFDDIVGKK YPGSGTNEDP YIVDWLPNDK 
EDPQQWPGTY KWFTIFIASM MTLAVALSSS AYSGGVISIM EDFGSSRELL IAGISLFVLG
FAFGPLLWAP LSELYGRRWI YIISYALLTL WSGAAAGAPN VGALLVFRFF AGFFGSSPLA
NAGGTISDVL DANQRGLGMA LFAAAPFLGP ALGPITGGFL GLTSGWRWIE GFLTILSGVL
FLVGIGFASE TYAPTILRRR AKRLSRVTGD VYRFRADAKK PLDAMALFKA SLIRPWKFLF
LEPIVTILSI YVALLYGILY LFFAAYPIIF QEGRGWNTGV GGLAFLGVLV GTIISVAVSI
LVVNPQYVKV ANKKGGRAAP EDRLPPALWG GILIVIGLAG TAATDGPNVH WIAPIIFGAP
FGCGIIIVFL SIMGYLVDSY TIYAASVLAA NSVLRSLFGA AFPLFTTQMF DKLGLHWGVA
LPGFLSLACV PFTWIFYKYG AAIRAKCKYS ADAERQMEMI MAARMAQSKQ EDEEARAEGK
EVIYRAASRP EGDESQDVQP SEQTGGLGRS QSKRSQHSAS AGQSGNGAPL DRVSTHLHHE
WTVYEALANR DENDLDDDER IRLEGLRRTF GDRSEK