Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC00290 |
Symbol | |
ID | 3256600 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | - |
Start bp | 84908 |
End bp | 86961 |
Gene Length | 2054 bp |
Protein Length | 636 aa |
Translation table | |
GC content | 51% |
IMG OID | 638255248 |
Product | multiple drug resistance protein, putative |
Protein accession | XP_569405 |
Protein GI | 58264498 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACACCA CCAGCGATTC TACTCAAGCG AGCGACGGCA AGCCTCTCTC ATCTTATACC CTCAGACGGT ATCCCTGGCG ACCTTATGTT GTACCCTTTG ACGATATCGT CGGGAAAAAG TACCCTGGTT CCGGCACAAA CGAAGATCCA TATATCGTAG ACTGGCTGCC CAATGACAAG GAAGATCCTC AACAGTGGCC TGGCACTTAT AAATGGTTTA CCGTGAGTTA TGCGTCTGGT ACACACGATT CGCTTTTAAC GTCTATTTAC AGATCTTCAT TGCCAGTATG ATGACTCTCG CGGTGGCCTT GAGCTCTTCT GCATACTCTG GAGGTGTGAT TAGTATAATG GAGGATTTCG GTTCTAGCAG AGAGCTTCTC ATTGCTGGTA TTTCCCTCTT CGTCCTTGGG TTTGCCTTTG GTCCGCTGTA AGTTGCCCCA TTCGAAGCGA AGACTATGTG CTTACCATTT CAGATTATGG GCCCCATTGT CAGAGTTATA TGGCCGACGT TGGATCTACA TCATCTCCTA TGCTCTCCTC ACCTTATGGT CCGGCGCCGC TGCAGGCGCT CCGAACGTCG GCGCCCTCCT CGTCTTTCGT TTCTTTGCCG GCTTCTTTGG CTCATCACCT CTTGCCAACG CAGGTGGTAC TATCAGCGAC GTCCTTGATG CCAACCAACG AGGTCTCGGC ATGGCTCTAT TCGCTGCCGC CCCTTTTCTT GGTCCTGCAT TGGGTCCTAT CACGGGTGGT TTCCTTGGTC TGACTTCCGG ATGGCGATGG ATCGAGGGAT TCTTGACCAT TCTTAGTGGT GTCCTGTTTC TCGTGGGCAT TGGATTCGCC AGCGAGACAT ATGCTCCCAC TATTTTGAGG CGGAGAGCTA AGCGACTAAG CAGAGTCACT GGCGATGTCT ACAGATTTAG GGCCGATGCC AAGAAACCTC TCGATGCAAT GGCCTTGTTC AAAGCGAGCT TGATTCGTCC TTGGAAGTTT CTCTTCCTCG AGCCTATTGT TACTATCCTT AGTATCTACG TTGTGAGTTA GTTCCCTCGT TCGTGCGAAT CTCTGCTCAT CAACCATAGG CGCTGCTTTA TGGTATTCTC TATCTGTTTT TCGCAGCCTA CCCTATCATC TTCCAAGAAG GTCGTGGCTG GAACACTGGC GTTGGAGGCC TCGCATTCCT TGGTGTACTT GTAGGCACCA TCATTTCGGT CGCCGTCTCT ATTCTAGTGG TCAATCCGCA ATACGTCAAG GTCGCTAATA AGAAAGGTGG CCGAGCAGCT CCCGAAGATC GTCTACCTCC TGCCCTGTGG GGTGGAATCC TCATCGTCAT CGGTCTTGCC GGTACGGCAG CCACTGATGG TCCCAATGTC CACTGGATTG CCCCTATCAT CTTCGGTGCC CCTTTCGGTT GCGGTATCAT CATCGTCTTC TTATCGATCA TGGGTTACCT CGTCGACAGT TACACTATCT ACGCTGCATC TGTTCTTGCC GCCAACTCTG TGCTTCGATC CCTCTTTGGC GCTGCGTTCC CACTATTTAC AACCCAAATG TTCGATAAGC TCGGCCTGCA TTGGGGTGTT GCCTTGCCCG GTTTCCTGTC CTTGGCTTGC GTCCCTTTCA CTTGGATATT CTACAAGTAT GGCGCTGCTA TTCGAGCCAA GTGCAAGTAC TCTGCCGATG CTGAGCGACA GATGGAGATG ATCATGGCTG CTCGGATGGC TCAGTCCAAG CAGGAAGACG AGGAGGCTAG GGCTGAGGGT AAGGAGGTTA TTTATCGCGC AGCTAGCCGA CCCGAAGGAG ATGAATCGCA GGACGTCCAA CCTTCTGAAC AAACAGGCGG TTTAGGAAGG AGTCAAAGCA AAAGAAGCCA ACATTCCGCC AGTGCTGGCC AGTCTGGTAA TGGTGCACCG TTAGACAGGG TCTCCACACA CCTTCATCAC GAATGGACTG TATATGAGGC TCTTGCCAAC AGAGATGAGA ATGATTTGGA TGATGATGAA CGGATCAGAC TTGAAGGTCT TCGTCGGACG TTTGGGGATC GATCAGAAAA GTAG
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Protein sequence | MYTTSDSTQA SDGKPLSSYT LRRYPWRPYV VPFDDIVGKK YPGSGTNEDP YIVDWLPNDK EDPQQWPGTY KWFTIFIASM MTLAVALSSS AYSGGVISIM EDFGSSRELL IAGISLFVLG FAFGPLLWAP LSELYGRRWI YIISYALLTL WSGAAAGAPN VGALLVFRFF AGFFGSSPLA NAGGTISDVL DANQRGLGMA LFAAAPFLGP ALGPITGGFL GLTSGWRWIE GFLTILSGVL FLVGIGFASE TYAPTILRRR AKRLSRVTGD VYRFRADAKK PLDAMALFKA SLIRPWKFLF LEPIVTILSI YVALLYGILY LFFAAYPIIF QEGRGWNTGV GGLAFLGVLV GTIISVAVSI LVVNPQYVKV ANKKGGRAAP EDRLPPALWG GILIVIGLAG TAATDGPNVH WIAPIIFGAP FGCGIIIVFL SIMGYLVDSY TIYAASVLAA NSVLRSLFGA AFPLFTTQMF DKLGLHWGVA LPGFLSLACV PFTWIFYKYG AAIRAKCKYS ADAERQMEMI MAARMAQSKQ EDEEARAEGK EVIYRAASRP EGDESQDVQP SEQTGGLGRS QSKRSQHSAS AGQSGNGAPL DRVSTHLHHE WTVYEALANR DENDLDDDER IRLEGLRRTF GDRSEK
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