Gene CNC00250 details

Gene Information

• Locus tag: CNC00250
• ID: 3256448
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006685
• Strand: -
• Start bp: 68265
• End bp: 74795
• Gene Length: 6531 bp
• Protein Length: 1860 aa
• GC content: 49%
• IMG OID: 638255245
• Product: hypothetical protein
• Protein accession: XP_569398
• Protein GI: 58264484
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0117] Pyrimidine deaminase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.215441
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGCCAGTCCA GCCGCTCAAC CGTCAACCGT CGATTGCGCA GCTAGAGCTT CATTTTCAAG 
CTCGTGTGAC TAACTGTTCA CTTCAACACC CATATTCTCG CCGGCCAGCA GCCATTCTGC 
CCAAGTGTTT ATAGCTATCC CATCCGACCT CTGTGTCTGA AGGCAGTATC ACTCGGCTAT 
CCTTCTCCTT TGTCCTTCGC AGCCATCCAA GTGCTCGTGT GACCGAACTT CACGTCAAAG 
GACCTCCGTG TCACCACCCT CGAGAAGAGC TTCATACTCT GAACTTCAGT TGTTCCACCA 
CCCTCGCAAG CGGAAAGAGA GGCGACCAAA CATCACTCCA TTCGCATCTC TCTAAGCGAC 
ACACCGATCA TGAATAACTA ATAACCAGTA GGCCCCAGGT CTCTGGTTCA AATTCCTCGC 
TTCATTCCTG TCTTATCTTA TCAATTCAAT CAAACAAACC GTGCGCCTGG GAGATGCCCA 
ATATCTCAGA AAGTATTGAT AGTGTGATGG AAGGTGTCAA GGGGCTAGTT AATATGGCAG 
AAGGGTATCT CGCCCCAGCA TCTGATGAAG GAGAAGCTTC CGTCCCACCA CCTCGACCCC 
AATCTCAACC CCTACACATA CCTTCCACTC ACCGCAACAC CACATCAAAA TTCGCTCTTC 
CACAACAGAG TCAACTTGTT CAGACTATCG ATGTACCTTC CGGTTGGATC CATCTGCAAG 
CGGCGTATCT TGATGGGGAT GGTGGTCAAC GGCAAGTGAG GCCGTTTGGA TTGAGAAATC 
TTACAGAGGA AGAGGTGGAA GTAGAAGTGG AGAGTGATTT GAAGCAGCTT TTGTTTTGGG 
CCTCGGATGA TGAAAAGAGT GAGTATTTTT TTCTTCTCTA GAATCCATAT CACAGGTTTA 
ACATGGTACA GGCATTCCAT CTTCCGCATC ATCAACATCT TCATTATCTA CCAATGCCGG 
TTTACCTTCT CTCCAAATAA CCATTCCCGC CTCTTCCACT GTCACCCTAT TCATCGCATT 
CCAACCTACC GTCTCCCTCC CCCCTTTCCC TTTGAACCCT CTTCCGCCTA CTGGTACAAT 
TGATGACGGA GGGTACACCC CTCGGGTCAA GCCGATCCTT TCTCGCACAA ATTCATTTGA 
ATTGTCGCCT GTTGGTTTAT CCGTGAGTGA TTCGACCGAG TCGGGTCAGA GTCTACAGAG 
TGTCGCCGGG AATATACGCG AAACCCATGT TGCAAAGAGG CCGGAACCTA TCCACCGGGC 
ATTTTCTGTC CATGGCTCGG TGTCTATCCA AGCGATCACC GCAACATCTC ATCAGTCCAT 
CGCGCTTCCA TTTTTTGCCA CAGTCTGTCG CTCAGTGTTT ACCGCAGGCC CTATCGAACC 
TGTATCAGGA CTTGTGACTG GTTCACAACA ATCTTCTGGT GATTTGGTTG TCGATTTTGG 
AAGTGAGAAT GTTATGGGTA AAAAGTACCA CCGGGATATC TTACTCGTCA ATCGATCTGA 
AATCGAACTG GTATGGACAA CACACGTGGT CAGTGCGCCG CACAAAGATA GCGTCTGGTT 
CGAACTGCGC GATTTAGACT CTGAAAATGT GTTTGGGGTG GATCACTCTT CACAGCCAGT 
ACCTCTTCCT GCGTTGTCAA GCCGACATCT CCGTCTATCC CTCCGATCGA AAGCACCCGT 
CAACGATTTT GAATTTTCTT TCCTCTTATC CAACTCAAAC CAAGCGGGTA ATATCGTTAC 
TTGCAAAGCT ATAGGGTCCA TCCTCCCCAC TACGGCGGAT GACTCGCTCA AAATTCTTTC 
AGGACCTACC CTCGACTTTG GTGAAATCAC AGATAAAGTT TGGGCAAGGC AAACAATTAG 
TGTGAGAAAT GTGGGAGATC GGACGCTAGA TGTGCGATTT GGGAAGAGTG AAGGCGTGGA 
AGTGGTCTTT AGGCTTGCGG GAGTGGCGGG AGAGGATGTG GATGAGGACT TGCCTATCGA 
ACGATCGATG GGTATCTCGT CCGCCAAAGA AAAAGGGTTG GGATTGTCGA GGACGTCCAC 
GAGAGAGGTG GCGTATCCTG CAGACCATCC TCATGTCCAC TCAACGTCGT TGGAACAGGG 
GAAGGACGAA GGAGGGAATG AGAATACAGA GAAATGGAAA GAAAGGGAAA TGTCGCAGTC 
TGGTGGCTCG AGGCCTCTGT CAAGGATCAC TTCTCGGACA TCTTCCAGCC ACCAAGGGCC 
ATATCATCTC GAAGGGTTCG AGTCCGAATC GGAAGATGTC GAAGCGCCGT TCTTTGGAGG 
AGGAGGAGGT GGTGGTGGGA CAGGTAGCGG TGGACAAGAT GGTCAACTCA GTTTGTTAGG 
GAGTCATCCT CGGGTTATGG CGTCTCCAAC AATTCCGGCT CCAACAGAGC AGCAGGTTAT 
CCCAAACCAA ATTGAGGAGA TTACTATGCG TCCAGGGACT GAGTATAGAA TATCCGTCCT 
TCACCGTCCT GCTTCTCTCG GCCCTTCAGC CGCACCTGAA ATCGCAGGAA CCTTGAGGAA 
ATCATCATTC AAAATCTATC TCGACTCCAT CCCTTCCTCC CTTCGCTCAT CCCACGCCAC 
CCACACCTCT ACTCGTCGAA CCATCTCGGC CACAGTGTCT TCCTGTACTT CTCTTATCCG 
GCTAGTATCG GGCAACGTTG TGGACTTTGG TCAGGTGACA GTTGGTGCGA GCAAGTCGAC 
GACGATAAAA ATTGAGAATT TAAGTGAGCT TTCGACAAAG GTGGAGATTG CTGCGATGAG 
CAAGGTGTTG AGCGTGAATA AGAGTGTGAT TGTGATACCG CCCAAGGAGG TAGTAGAGGA 
AAAGATGGAG TTTTTCCCGA GGAGGATAAA TGAGAAATAT GAGAAGCAAA TCTTCATCAG 
AAATCTTCTA AACCGCGCAA ATGGTGAGTT TGTAAATTCT TGGTCGAAGC CGGTTCTATG 
TCTAACCTTT AGTTTCAAGA TCAACTGGTA GAAATCAAGT CTCGTAACGT TGATGTGTAC 
AACCTCACTC TCCATTCACA TCTATACCGA ATCCTCACTC CTTCCGGGTC CAATTTCCTC 
GATTTCGGCT CTGTCGTCAT CAACTCTCCA ACTGTTCGTA TCATCAACAT TGAAAACCTC 
TCTCGAGCGC CTCTAGTTCT TGACCTTTCT GCTTCTCAAC CGGAAGACAT TGAGCTTTTT 
GTCAAAGCTG AAGACTCCTC GGCTGCGAAA GCTCTGGCTT CGGGCAAATA CGCTGAAGAA 
GCTCAATCGT CATCTCACGG AGGTGAGAGG CCAGGCGGTA CTGGAGAATT AAAAGAGAGA 
TTCATGGAAG AGCTGAATGA AAAGAGCTCG AACGGAGGGA GTATAAAATC AAAGAAGGGA 
AGGGAGAAGA ACGGTGGTCG AGCCAAGGAG GAGAACGGAG AGGAAATTGG GGGAAAGAAA 
GGCAGTATTG CCGCAAGTGT GGCCACGGCA CTGAAGAAGG GCAGTAGAGG AAAACCCGTT 
CAAGTGAGTG CTCTTTTCAT ACTTGGTAAC TAAGCTGACG TCCATGACAG TTGTATGGCA 
ACTCGGTTGT CTTCAAAGAT CGAAGTCTTC TTGAGCCTCA CGAGTATCTT GATTTGGCGT 
CTGGTCCACC TGTTGCTGCC CATCGATCTT CCCCCCACTC CAAGCGCACC CAACTCCTTG 
AGTCTATCGA GCTTGAAGAC AAGTCCAAAC TCTCGGGACA GCACCCTAAA GTCCCTAAAT 
TAGACTTTGC GGCGGGTGCA AAAGCAACTG GCGCGGTAGG TAAAGAGGGA AAGAAAAGGA 
GACAAGCTCA GGAGCACTCA CACCATCATA CTCAACATCA CTCTCATCCC TCTCAAGCTA 
GAACAGCGCC CGGTACGGGT CAACACACGC CAAAAACCCC TGATAAGACT AAGCCCCATC 
TTGGGTCTTT TGCACTTATC AACAGACTTC TACCTCAAGT CACAGATGGT GGTCTCAAGT 
CGCCTGCGTT GACCGCCAAG CGTATTGAGC CCCCACTTGA CAACCCGCCG GCAGCACCTA 
CAGACCCGTC GAAGATGACT CCTGATCAGC TGTTGCTTGC CATAGAACAG CACGATGCGA 
AGAAATCTTC AATGACTCAC ACGACCCTAG AAGAAGAAGA GGCATTTGTG CGACGGACAA 
TTGCCTTGAG AAAGGAGTTG CAGAATCTCA TCGCAAATAA CAGGCTTATA CCCGCTCAAA 
CCCTGAGGGT CGCTCCTGGC GCATCGAGAA GTTTGATAGT CATTATGACT CCCAACTCTT 
CCATCCGGCC GCATATTTCC ACCCGCGCAA AGCGTGCAGA TTCTAGGATC TTTATCAAGC 
TTTTAGAGTT CGACAAGTCG CTGCTGAACT CTGCCAGATC GGGTCCCGGC ATCACTCCCG 
GACCGGGATC AAGAAAGCAA CTGGGCGGAG ATCAGGATAT GGAAGTGCTT GAGGGTGTCG 
AACTGCCCAT CAGGGATTTA ATCATCAGAA GTTCATGTGT AAGGAGTGTG CTTGAAGTGC 
AACAGAGCTC GATTAATTTT GGCGCGTGTG ACAAGGGTGA AGTCAAGAGC AAGACGATTG 
TCATCCACGT GAGTGGCTTT TGCCATTGAT AATCACGAGT GTCCACTGAA ATGATTTACC 
CAGAACAAAT CGGATTGTAT TGGTCTTTTC CGTCTTCGCA CCTCCGGATC TATAGCTTCT 
GGTGATCTCA AACTCGGGCT TGGCCGCTAT GGTGTTATAT CCGCTTTCGG CCGCAAGCAG 
TTTGACAATT TCTCATTCAC GCCGTCTTTG GTTGGGAATT ATCAAGAGAA TATTACCATT 
GAGAACGTTC TTGATAGCTG GAACGATCAG CCGCTTGCCG TCAAAGCCAC CGTGCGGAAG 
GTTCCTACTT TCAAAGTAGA CCCTTTGAGC TTGGACTTTG GGGTAGTTGA AAAGTCGACC 
AGAAAGCCAG AGACAAAAGG GTTCGTCATC ACCAATGTCT CCAAGCATGA GCGAACATTT 
GTCATCTCTG TGCAAGATCT TGTACCCAAC AGTTTTGCCG AGATTCACCT CATTCAAGAC 
GAAAAGGATG CTGGAACAGC CCTTTCCAGG GTTGAAGAGG AAGAGCTCGA GGCATTGCTT 
CAAAAGTTGA AGATTGCGAG GAGAAAGGGC AAGGCGGAGA AGATTGCCAA GTATGAGACG 
AGGTTGTTGG AGTTAGGTGT GCCCAAACCA CAACTGAATG CCGGTGCGGA AGGTGAGGTT 
GGTAAGGACG GCCAGGAGGA AGAAAGTAGT GCTTCGGTAG CTGGTAAAGT CATTGCCGAA 
ATTGCTTCCT CGGTTCTTAC AACTCTAAAG GATACTAAGG CCGACCTTCC AAAGGAATGT 
ATCACAAAGC TCAACCTCAC TCTCGCTCCG AAACAGAAGA GTAACATCCT TGTCGACCTT 
ATCCCACGAA ATCCGTCGTC GTCAGCAGAC GATGGACAGA AGGACGAGAG TTCGATCGAT 
GTGAGCGCCT CGATAACAAT TCACGATAGG AAAAACACGG ACGAGACTGT GAGCGTCAAT 
GTGATGGCTA GTCGAATGGC GAAGCCGGTC AGATCACGGA CCATGGACAC TTCCAACTCA 
TCAGGACAGG AGGATATGGA TGGTCATGTC ACCCCATCGG CAACATCAAG TAAGTTTATG 
CTGATCTGCA AGTTCCCCTC TACAAGATGT CGCTCGCGCT AATCACTATT TGGCTGTAGA 
TCCTACAGAT CTTGCGCTTA TACGGCATTG TCTACAACTC ACTCTCAACT GTGAAGTCTC 
ACCCACCGCG TTCTGCGTCG GGTCTACCTT GTTTCTACCT TCGTCTTCTT CTTACTACCC 
ACCTCTCAAA TCCCACTTCG ATGCTTTTCC TCAATCCGTT GTGGGTGAGC CCAAGGGCTT 
GATTCTGGCG GACGGATGGT CACGACAGAT CCCCGGTAAT ACCCACGCAG AGGCGAATGC 
TCTGACAAAC TTTAAGACCA AGTACGCTGA TATACTAAGC GACGATGATG GTGACGATGA 
AGGCCAACGC GAAGGCGAGG GCTTCATTGA AGGCCGAGGC TACGAGCAAA GGGAGGGCAG 
CTCAGGAGTG GAAGATAAGG TTGAGGGTGA AGAATCCGGA TCGACCGTAT CCTCAAAGGA 
AGTTATTCAA CTACCACCGA TAGATATGGT GTTGAAGGAT GCGATATGCT TCGCGACGAT 
GGAGCCTTGT TCATACAGGA CATCAGGAGG GCCGAGCTGT GCTTTGGAAC TTGTAAGAGC 
AGGAGTGAAG GCTGTATATT TGGTAAGTCT TTCAAGTCCT TTCCCTTGTT TTTGGCGTAG 
GCTAAACGGA CATTTGTTTT GTGCGCACAG GGTGTAGAAG AGCCGCCAGA TTTTGTGGAA 
TGTGAAGGTG TCAGGATATT ACAAGACGGT GGTGTACGAG TAGTGCGAGT GGTGGGCCTT 
GAAGAAGATT GTCTGAAGGC TGCCCGAAGA GGAAGGACTT AATCCTATGT CCTGTGTCAT 
AGAGTATACT CATATATGTT TGGAGGTGAA CGGGTCATCA GGAAGATATG A 

 

Protein sequence

MPNISESIDS VMEGVKGLVN MAEGYLAPAS DEGEASVPPP RPQSQPLHIP STHRNTTSKF 
ALPQQSQLVQ TIDVPSGWIH LQAAYLDGDG GQRQVRPFGL RNLTEEEVEV EVESDLKQLL 
FWASDDEKSI PSSASSTSSL STNAGLPSLQ ITIPASSTVT LFIAFQPTVS LPPFPLNPLP 
PTGTIDDGGY TPRVKPILSR TNSFELSPVG LSVSDSTESG QSLQSVAGNI RETHVAKRPE 
PIHRAFSVHG SVSIQAITAT SHQSIALPFF ATVCRSVFTA GPIEPVSGLV TGSQQSSGDL 
VVDFGSENVM GKKYHRDILL VNRSEIELVW TTHVVSAPHK DSVWFELRDL DSENVFGVDH 
SSQPVPLPAL SSRHLRLSLR SKAPVNDFEF SFLLSNSNQA GNIVTCKAIG SILPTTADDS 
LKILSGPTLD FGEITDKVWA RQTISVRNVG DRTLDVRFGK SEGVEVVFRL AGVAGEDVDE 
DLPIERSMGI SSAKEKGLGL SRTSTREVAY PADHPHVHST SLEQGKDEGG NENTEKWKER 
EMSQSGGSRP LSRITSRTSS SHQGPYHLEG FESESEDVEA PFFGGGGGGG GTGSGGQDGQ 
LSLLGSHPRV MASPTIPAPT EQQVIPNQIE EITMRPGTEY RISVLHRPAS LGPSAAPEIA 
GTLRKSSFKI YLDSIPSSLR SSHATHTSTR RTISATVSSC TSLIRLVSGN VVDFGQVTVG 
ASKSTTIKIE NLSELSTKVE IAAMSKVLSV NKSVIVIPPK EVVEEKMEFF PRRINEKYEK 
QIFIRNLLNR ANDQLVEIKS RNVDVYNLTL HSHLYRILTP SGSNFLDFGS VVINSPTVRI 
INIENLSRAP LVLDLSASQP EDIELFVKAE DSSAAKALAS GKYAEEAQSS SHGGERPGGT 
GELKERFMEE LNEKSSNGGS IKSKKGREKN GGRAKEENGE EIGGKKGSIA ASVATALKKG 
SRGKPVQLYG NSVVFKDRSL LEPHEYLDLA SGPPVAAHRS SPHSKRTQLL ESIELEDKSK 
LSGQHPKVPK LDFAAGAKAT GAVGKEGKKR RQAQEHSHHH TQHHSHPSQA RTAPGTGQHT 
PKTPDKTKPH LGSFALINRL LPQVTDGGLK SPALTAKRIE PPLDNPPAAP TDPSKMTPDQ 
LLLAIEQHDA KKSSMTHTTL EEEEAFVRRT IALRKELQNL IANNRLIPAQ TLRVAPGASR 
SLIVIMTPNS SIRPHISTRA KRADSRIFIK LLEFDKSLLN SARSGPGITP GPGSRKQLGG 
DQDMEVLEGV ELPIRDLIIR SSCVRSVLEV QQSSINFGAC DKGEVKSKTI VIHNKSDCIG 
LFRLRTSGSI ASGDLKLGLG RYGVISAFGR KQFDNFSFTP SLVGNYQENI TIENVLDSWN 
DQPLAVKATV RKVPTFKVDP LSLDFGVVEK STRKPETKGF VITNVSKHER TFVISVQDLV 
PNSFAEIHLI QDEKDAGTAL SRVEEEELEA LLQKLKIARR KGKAEKIAKY ETRLLELGVP 
KPQLNAGAEG EVGKDGQEEE SSASVAGKVI AEIASSVLTT LKDTKADLPK ECITKLNLTL 
APKQKSNILV DLIPRNPSSS ADDGQKDESS IDVSASITIH DRKNTDETVS VNVMASRMAK 
PVRSRTMDTS NSSGQEDMDG HVTPSATSIS PTAFCVGSTL FLPSSSSYYP PLKSHFDAFP 
QSVVGEPKGL ILADGWSRQI PGNTHAEANA LTNFKTKYAD ILSDDDGDDE GQREGEGFIE 
GRGYEQREGS SGVEDKVEGE ESGSTVSSKE VIQLPPIDMV LKDAICFATM EPCSYRTSGG 
PSCALELVRA GVKAVYLGVE EPPDFVECEG VRILQDGGVR VVRVVGLEED CLKAARRGRT