Gene CNC00170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC00170 
Symbol 
ID3256132 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp53564 
End bp55457 
Gene Length1894 bp 
Protein Length437 aa 
Translation table 
GC content47% 
IMG OID638255237 
Productexpressed protein 
Protein accessionXP_569381 
Protein GI58264450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAGCACCGTC ACACATGCGG TTTACCGCAC CCCGTCCCAA TAACTTTGCT CTTGCTCTTC 
TCCCAGCAGC TCTCACGTTA TTACTACTTT TATACCTCTG GACAGTCTCT CATCGGCCGC
CGGTACCGGA GAAGGCAAAG ATTGAGAATC GTATGTTTGT TCACGTTGTA CAAAGCTTAA
TGTTGACACA AATTTACATT GGTTTAGCGC ACAGATGGGG GTTTCCAGAG TGGTATGGCA
AAGGGCCGAC GCCTTATGAC CCCGAAAGTG GATTGTCTGT CGAAAAACAG AAGAGCGTCT
TGCTGTTTAT AGGCAAGTCC AGATGATATG AATATGATAG TATGCTAACA AGACATAGAT
CTTCCTTGTA TGAAAGCCCA TCTCATTCAT TTAAACAAAC CGCTAACATT TGACTTGCAG
ATGACTCGCT ATCCATCCCC AAAGCCCTTT CCACCCTCCA AATCCTCAGA AACGACCCCT
CCATACGTCT TTCAGTCATC TCCCCTTTCT CATCAACATG GGATCATCAG TCAACCCCAC
AGGAAAATTT AGAATCAGCT GGGTGCGAGA ATGTGGATCG ACTCTGGCGG ATAGGGGAGT
ATAGTGGGGA GGTGGAGGGG TGTGAAGGGG TGGTGTGGAT ATCCGAAGGA ATGGATAGAA
GGGCGAGGGT AGATGGACGA GCGAATGTAA GTTTTGTTGT ATTTGACTAA TTGAGTGAAG
TGACAAGAGC TAATTTGGTT GTCGGCTAGG TCATACTGGC GCAACAACCT TTCGATATAC
TCAGAGACGA GGTATCTTAT GACAGATTAA AAGAATCCCT GGGGGAGGAT TGGGAACTCG
GTCTGCTTTC ATATATCCCA CCAGCGGTGA GTTTCATTTG ATATGGACAA GAACGATAGC
TGACTCCTAC TACAGGCCGA GTAAGCGTAT TCCATTTGAG AAGGAGTAAT ACTGGTTAAC
TTTAATCTTC GACAAGCCCC AGCATATTTT ACCCCGAAGA AACACCATCC TATAAATCAG
TGACGTACTT CCCTCTTTCA TCTACGCCAG AACGCAAGCA TCCCAGAATG CCTTGGACTG
GGAAATGGTC CAAGTACACT CGTCAGTCTT TACCCTCCAT TTCAGTATTC AGTCCCTTCA
CCCAATTTGC ACTATATGGT ATCTCAAACA CTAACAGGGA AAACCAAACG TAGCATCGCG
CAAACCACCT CCTCCAACCA AAGCAGGACA GGACCCATTA TCCCCCGATA GCGCTTATAT
CAAGCATTGG AGGAAGGAAG ATAAACGCCG CGCAAAGGCG ATGCGTAAAG CTGGTATCTG
TCTTGTACGT CATCCCATGA CTGTATCACT TCATCACTTG ATTGAATCTA CAAGCCCGGA
AAAGTCTGAG AAACTGACAT GTGCCATGTT TAGTTTGAAG GGTGGCAGGA TGGACAGCTG
GATGAGAGAA TGGTAGAGGC AATGATGGCG GGGTGTGTGG TTGCTACTGT TCCTCCTCAA
ACTGACTATG GTATGTTTGC TTTCTCATCA ACTCTGAATC TGAAATTCAG AGTTACCTAA
CGCCCTTTCA GACATGTTAA AACCACTCAT CCTTCCTCTT TCACCCCCTT CGTCCTCCGC
TTCCCCACTC TCTCTTCCTG TCAAACAGAT ATCTACTCTT CTTGCTTCCC CACGCGCCTC
TCAAAGATTA ACATACAAGG CCCTTCACGC TTTCCTTGCT GCTCGGCATC ATTTTACCGT
CCAAACAAGG TTCGAACGGG TTTGGAATGT AGTCAAGGGT TGGGAGGAAG GGAAGAGAGG
ATATGATTTT GATGAGGGTC TGATGGGGTT TAGGTGGGAT TGTGGGACGG TGATGGATGG
GGATGCAGGA AGGCCGGCAT GGTGTAAAGA TTGA
 
Protein sequence
MRFTAPRPNN FALALLPAAL TLLLLLYLWT VSHRPPVPEK AKIENPHRWG FPEWYGKGPT 
PYDPESGLSV EKQKSVLLFI DLPYDSLSIP KALSTLQILR NDPSIRLSVI SPFSSTWDHQ
STPQENLESA GCENVDRLWR IGEYSGEVEG CEGVVWISEG MDRRARVDGR ANVILAQQPF
DILRDEVSYD RLKESLGEDW ELGLLSYIPP AADPSIFYPE ETPSYKSVTY FPLSSTPERK
HPRMPWTGKW SKYTPSRKPP PPTKAGQDPL SPDSAYIKHW RKEDKRRAKA MRKAGICLFE
GWQDGQLDER MVEAMMAGCV VATVPPQTDY DMLKPLILPL SPPSSSASPL SLPVKQISTL
LASPRASQRL TYKALHAFLA ARHHFTVQTR FERVWNVVKG WEEGKRGYDF DEGLMGFRWD
CGTVMDGDAG RPAWCKD