Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC00170 |
Symbol | |
ID | 3256132 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | - |
Start bp | 53564 |
End bp | 55457 |
Gene Length | 1894 bp |
Protein Length | 437 aa |
Translation table | |
GC content | 47% |
IMG OID | 638255237 |
Product | expressed protein |
Protein accession | XP_569381 |
Protein GI | 58264450 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAGCACCGTC ACACATGCGG TTTACCGCAC CCCGTCCCAA TAACTTTGCT CTTGCTCTTC TCCCAGCAGC TCTCACGTTA TTACTACTTT TATACCTCTG GACAGTCTCT CATCGGCCGC CGGTACCGGA GAAGGCAAAG ATTGAGAATC GTATGTTTGT TCACGTTGTA CAAAGCTTAA TGTTGACACA AATTTACATT GGTTTAGCGC ACAGATGGGG GTTTCCAGAG TGGTATGGCA AAGGGCCGAC GCCTTATGAC CCCGAAAGTG GATTGTCTGT CGAAAAACAG AAGAGCGTCT TGCTGTTTAT AGGCAAGTCC AGATGATATG AATATGATAG TATGCTAACA AGACATAGAT CTTCCTTGTA TGAAAGCCCA TCTCATTCAT TTAAACAAAC CGCTAACATT TGACTTGCAG ATGACTCGCT ATCCATCCCC AAAGCCCTTT CCACCCTCCA AATCCTCAGA AACGACCCCT CCATACGTCT TTCAGTCATC TCCCCTTTCT CATCAACATG GGATCATCAG TCAACCCCAC AGGAAAATTT AGAATCAGCT GGGTGCGAGA ATGTGGATCG ACTCTGGCGG ATAGGGGAGT ATAGTGGGGA GGTGGAGGGG TGTGAAGGGG TGGTGTGGAT ATCCGAAGGA ATGGATAGAA GGGCGAGGGT AGATGGACGA GCGAATGTAA GTTTTGTTGT ATTTGACTAA TTGAGTGAAG TGACAAGAGC TAATTTGGTT GTCGGCTAGG TCATACTGGC GCAACAACCT TTCGATATAC TCAGAGACGA GGTATCTTAT GACAGATTAA AAGAATCCCT GGGGGAGGAT TGGGAACTCG GTCTGCTTTC ATATATCCCA CCAGCGGTGA GTTTCATTTG ATATGGACAA GAACGATAGC TGACTCCTAC TACAGGCCGA GTAAGCGTAT TCCATTTGAG AAGGAGTAAT ACTGGTTAAC TTTAATCTTC GACAAGCCCC AGCATATTTT ACCCCGAAGA AACACCATCC TATAAATCAG TGACGTACTT CCCTCTTTCA TCTACGCCAG AACGCAAGCA TCCCAGAATG CCTTGGACTG GGAAATGGTC CAAGTACACT CGTCAGTCTT TACCCTCCAT TTCAGTATTC AGTCCCTTCA CCCAATTTGC ACTATATGGT ATCTCAAACA CTAACAGGGA AAACCAAACG TAGCATCGCG CAAACCACCT CCTCCAACCA AAGCAGGACA GGACCCATTA TCCCCCGATA GCGCTTATAT CAAGCATTGG AGGAAGGAAG ATAAACGCCG CGCAAAGGCG ATGCGTAAAG CTGGTATCTG TCTTGTACGT CATCCCATGA CTGTATCACT TCATCACTTG ATTGAATCTA CAAGCCCGGA AAAGTCTGAG AAACTGACAT GTGCCATGTT TAGTTTGAAG GGTGGCAGGA TGGACAGCTG GATGAGAGAA TGGTAGAGGC AATGATGGCG GGGTGTGTGG TTGCTACTGT TCCTCCTCAA ACTGACTATG GTATGTTTGC TTTCTCATCA ACTCTGAATC TGAAATTCAG AGTTACCTAA CGCCCTTTCA GACATGTTAA AACCACTCAT CCTTCCTCTT TCACCCCCTT CGTCCTCCGC TTCCCCACTC TCTCTTCCTG TCAAACAGAT ATCTACTCTT CTTGCTTCCC CACGCGCCTC TCAAAGATTA ACATACAAGG CCCTTCACGC TTTCCTTGCT GCTCGGCATC ATTTTACCGT CCAAACAAGG TTCGAACGGG TTTGGAATGT AGTCAAGGGT TGGGAGGAAG GGAAGAGAGG ATATGATTTT GATGAGGGTC TGATGGGGTT TAGGTGGGAT TGTGGGACGG TGATGGATGG GGATGCAGGA AGGCCGGCAT GGTGTAAAGA TTGA
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Protein sequence | MRFTAPRPNN FALALLPAAL TLLLLLYLWT VSHRPPVPEK AKIENPHRWG FPEWYGKGPT PYDPESGLSV EKQKSVLLFI DLPYDSLSIP KALSTLQILR NDPSIRLSVI SPFSSTWDHQ STPQENLESA GCENVDRLWR IGEYSGEVEG CEGVVWISEG MDRRARVDGR ANVILAQQPF DILRDEVSYD RLKESLGEDW ELGLLSYIPP AADPSIFYPE ETPSYKSVTY FPLSSTPERK HPRMPWTGKW SKYTPSRKPP PPTKAGQDPL SPDSAYIKHW RKEDKRRAKA MRKAGICLFE GWQDGQLDER MVEAMMAGCV VATVPPQTDY DMLKPLILPL SPPSSSASPL SLPVKQISTL LASPRASQRL TYKALHAFLA ARHHFTVQTR FERVWNVVKG WEEGKRGYDF DEGLMGFRWD CGTVMDGDAG RPAWCKD
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