Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC00130 |
Symbol | |
ID | 3256252 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | + |
Start bp | 38879 |
End bp | 41216 |
Gene Length | 2338 bp |
Protein Length | 540 aa |
Translation table | |
GC content | 48% |
IMG OID | 638255234 |
Product | hypothetical protein |
Protein accession | XP_569375 |
Protein GI | 58264438 |
COG category | [R] General function prediction only |
COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.997572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CACTATGCTG TAGCATCTGG CCTGCAGACC CATAACAACT TTTCAAGGTA GCCAGTATAT TGATCTGAGA ATACGCGGAA TACACGATCG AAATTATCAC AGCGATTCAA GATGCCGTCC ATCCGAGAGT CTCGAGCACC CATCGAACCT GATGACGTCT GGGAACATTC AAACTCAGAT CCAGAAGGTA ATCATGATTT TAACAACGTT CTTCACATAG ATTATATAGA AGGTGAGGCT TTAGAAAACA TGTCGGAGAA TGCGATGTTG CTGGGCGAAA CATCTGCGCC GATGGAATAT GATCACCGGC TAAGGCGTGG AAGAGGATGG GTTACCATCT CTGGCTTCTC GGTGAGTGCA CTATAATGGG TTTCGACTCT AGCTAAAAAA CGACCAGCTA CCCAAACCTT TACTTTATCT ACTTGCTGTA CCACCTTTAC TTATCCTTGT CAACCTGGTC GCAAGTACTT ACAACTCTGC CAGACCCCAC GCCCATTACC GACACCCGAC CTTAACCAAC GGCACTCATC CATTCCACCC CACAATTCTC CTCCTCTCCC TCGATGGCTT TCGTTCATCG TACCTCTCCA CACATGCTCA CCTCTTACCC AACCTTCTTT TTCTCTCCTC CTCCAAATGG GGTCTCCGAG CCGAAAGCAT GCAGCCCGTT TTCCCCACCT TAACCTTCCC GAACCACTGG TCACTCATGA CGGGACTTTA CCCCTCATCG CATGGGATCG TGGCGAACGA TTTCTGGGAT CCACTCTTTG ATGAAAAGGA GAACAAAGGG GCGCAGTTTG TCTATACAGA GGAGAGTAAA AGTTGGGATA GTAGGTGGTG GTGGGGTGAA CCTATTTGGG AGGTAGTAGA AAAAGTCGGA AGAAAAGCAG CTGTCATCAT GTGGTGAGTT TATCTCAAAA CAGTACTTTG CTGAATAAGA ACAAGGCCAG GGCCTCCTGT GACTAGAGCC GGTGCCTCTC CAAGTTACTT TGTACCATAT CGCGTAAGCC GGTTGCTCCA CATTCACATT CCATCATTCA CTCACTTCAA TATAGAACCT TCCACCTTCG TCAAAACTCT CGCAAATTTT CGCTTACCTC GACCATCCCC TTCCCACTCG CCCAGAATTC ATAGCTTCCT ATTTTCCCGA GATCGACCAA TCTGCCCATC GCCACGGCCC TGATGCACCC CAAGTGGAGG AGAAACTCAG AATGATGGAT GAGATGGTTG GTGGTCTGCT GCGAGGGTTA GAAGAGAGAA ACCTAACCGG GGTGGTAGAT CTGTTGATCG TTTCGGATCA CGGTGAGTGA TGTATGAGCT TAGCCGAGGC AAAGGGCTGA CATATGGGAA GGCATGACGG GAACGAGTAA CGAGAGAATT ATATACCTAG ACGATATCCT GGGAGAAGAC GGAATAGAAG CTATCGAGCA TAAAGACGGT AGGTCTTCCT TCCGGGGATT CTTGGACGTT CGGCTGAACC ACCCCTACAG GTTGGCCATC CGTAGGCCTC CGTTTCTCTC CCACTTCCAA TCATTCTCTC TACCTCTCCC GTCTCCTCTC AGCCGCCGAA GCTTCCAACG GTACATTTGC AGTCTACACC CCCGATACCA TGCCCCAACG TTGGCACTTC ACTGGTGGGA GGAGAATTGC GCCCATTTAT GTGGTACCGG ATATAGGTTG GGCGGTGACT GATCGTGTAA GCTTGTGCTA CAATTTTCCG CTTATAAGGA GCTTTATTCT GATCTCTTTA CAGCACGAGC ACGAGGTTCT CTTCCAAGGA GATTATCAGC CGCGAGGAAA CCATGGTTAC GGTAAGTCCA AGACTGATGC ACTCGAATTA CAGTCATTTA CGCATGAAAG GGGGTAAAAA CTGACCATTC AACTCCTGGC GTAGATAACA AATACGCCGA CATGCAAGCT ATATTCTTCG CTCACGGCCC ATTTGCGCGA ACGTTGAAAG ATATGGGCAA AGGGTTCATT TCTCATGATC CTCCTGTTTT GCACAGTAGG TTTTCCATAT CTCACTTCTT TCTCTTTTGC TTGCTTGTAG GCTTGCAAAG CAATAGGGTT AGATAAAATG ATCAAATACG AGACGTTAAT TCCTGCTTTT TCTTCTGTAG GCTTCAAGAA TCTTGAGATC TTCTCACTCG TCACCCGCCT CTTGAGCCTG CGAGATGTCG AACCAGGACA TAATGGGACG ATCGGCTTTT GGGAGGGATT ATTGGATTGA GCGCCTACTA GATAAATGTA CGTATTCGTG AGACCGCCAC TCAAAAACTT TTAAGACTAC TTAATGACTC ATAACTTGGT CATATCAGCT GTACTCATCA CACACATG
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Protein sequence | MPSIRESRAP IEPDDVWEHS NSDPEGNHDF NNVLHIDYIE GEALENMSEN AMLLGETSAP MEYDHRLRRG RGWVTISGFS LPKPLLYLLA VPPLLILVNL VASTYNSARP HAHYRHPTLT NGTHPFHPTI LLLSLDGFRS SYLSTHAHLL PNLLFLSSSK WGLRAESMQP VFPTLTFPNH WSLMTGLYPS SHGIVANDFW DPLFDEKENK GAQFVYTEES KSWDSRWWWG EPIWEVVEKV GRKAAVIMWP GPPVTRAGAS PSYFVPYRNL PPSSKLSQIF AYLDHPLPTR PEFIASYFPE IDQSAHRHGP DAPQVEEKLR MMDEMVGGLL RGLEERNLTG VVDLLIVSDH GMTGTSNERI IYLDDILGED GIEAIEHKDG WPSVGLRFSP TSNHSLYLSR LLSAAEASNG TFAVYTPDTM PQRWHFTGGR RIAPIYVVPD IGWAVTDRHE HEVLFQGDYQ PRGNHGYDNK YADMQAIFFA HGPFARTLKD MGKGFISHDP PVLHSFKNLE IFSLVTRLLS LRDVEPGHNG TIGFWEGLLD
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