Gene CNC00130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC00130 
Symbol 
ID3256252 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp38879 
End bp41216 
Gene Length2338 bp 
Protein Length540 aa 
Translation table 
GC content48% 
IMG OID638255234 
Producthypothetical protein 
Protein accessionXP_569375 
Protein GI58264438 
COG category[R] General function prediction only 
COG ID[COG1524] Uncharacterized proteins of the AP superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.997572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CACTATGCTG TAGCATCTGG CCTGCAGACC CATAACAACT TTTCAAGGTA GCCAGTATAT 
TGATCTGAGA ATACGCGGAA TACACGATCG AAATTATCAC AGCGATTCAA GATGCCGTCC
ATCCGAGAGT CTCGAGCACC CATCGAACCT GATGACGTCT GGGAACATTC AAACTCAGAT
CCAGAAGGTA ATCATGATTT TAACAACGTT CTTCACATAG ATTATATAGA AGGTGAGGCT
TTAGAAAACA TGTCGGAGAA TGCGATGTTG CTGGGCGAAA CATCTGCGCC GATGGAATAT
GATCACCGGC TAAGGCGTGG AAGAGGATGG GTTACCATCT CTGGCTTCTC GGTGAGTGCA
CTATAATGGG TTTCGACTCT AGCTAAAAAA CGACCAGCTA CCCAAACCTT TACTTTATCT
ACTTGCTGTA CCACCTTTAC TTATCCTTGT CAACCTGGTC GCAAGTACTT ACAACTCTGC
CAGACCCCAC GCCCATTACC GACACCCGAC CTTAACCAAC GGCACTCATC CATTCCACCC
CACAATTCTC CTCCTCTCCC TCGATGGCTT TCGTTCATCG TACCTCTCCA CACATGCTCA
CCTCTTACCC AACCTTCTTT TTCTCTCCTC CTCCAAATGG GGTCTCCGAG CCGAAAGCAT
GCAGCCCGTT TTCCCCACCT TAACCTTCCC GAACCACTGG TCACTCATGA CGGGACTTTA
CCCCTCATCG CATGGGATCG TGGCGAACGA TTTCTGGGAT CCACTCTTTG ATGAAAAGGA
GAACAAAGGG GCGCAGTTTG TCTATACAGA GGAGAGTAAA AGTTGGGATA GTAGGTGGTG
GTGGGGTGAA CCTATTTGGG AGGTAGTAGA AAAAGTCGGA AGAAAAGCAG CTGTCATCAT
GTGGTGAGTT TATCTCAAAA CAGTACTTTG CTGAATAAGA ACAAGGCCAG GGCCTCCTGT
GACTAGAGCC GGTGCCTCTC CAAGTTACTT TGTACCATAT CGCGTAAGCC GGTTGCTCCA
CATTCACATT CCATCATTCA CTCACTTCAA TATAGAACCT TCCACCTTCG TCAAAACTCT
CGCAAATTTT CGCTTACCTC GACCATCCCC TTCCCACTCG CCCAGAATTC ATAGCTTCCT
ATTTTCCCGA GATCGACCAA TCTGCCCATC GCCACGGCCC TGATGCACCC CAAGTGGAGG
AGAAACTCAG AATGATGGAT GAGATGGTTG GTGGTCTGCT GCGAGGGTTA GAAGAGAGAA
ACCTAACCGG GGTGGTAGAT CTGTTGATCG TTTCGGATCA CGGTGAGTGA TGTATGAGCT
TAGCCGAGGC AAAGGGCTGA CATATGGGAA GGCATGACGG GAACGAGTAA CGAGAGAATT
ATATACCTAG ACGATATCCT GGGAGAAGAC GGAATAGAAG CTATCGAGCA TAAAGACGGT
AGGTCTTCCT TCCGGGGATT CTTGGACGTT CGGCTGAACC ACCCCTACAG GTTGGCCATC
CGTAGGCCTC CGTTTCTCTC CCACTTCCAA TCATTCTCTC TACCTCTCCC GTCTCCTCTC
AGCCGCCGAA GCTTCCAACG GTACATTTGC AGTCTACACC CCCGATACCA TGCCCCAACG
TTGGCACTTC ACTGGTGGGA GGAGAATTGC GCCCATTTAT GTGGTACCGG ATATAGGTTG
GGCGGTGACT GATCGTGTAA GCTTGTGCTA CAATTTTCCG CTTATAAGGA GCTTTATTCT
GATCTCTTTA CAGCACGAGC ACGAGGTTCT CTTCCAAGGA GATTATCAGC CGCGAGGAAA
CCATGGTTAC GGTAAGTCCA AGACTGATGC ACTCGAATTA CAGTCATTTA CGCATGAAAG
GGGGTAAAAA CTGACCATTC AACTCCTGGC GTAGATAACA AATACGCCGA CATGCAAGCT
ATATTCTTCG CTCACGGCCC ATTTGCGCGA ACGTTGAAAG ATATGGGCAA AGGGTTCATT
TCTCATGATC CTCCTGTTTT GCACAGTAGG TTTTCCATAT CTCACTTCTT TCTCTTTTGC
TTGCTTGTAG GCTTGCAAAG CAATAGGGTT AGATAAAATG ATCAAATACG AGACGTTAAT
TCCTGCTTTT TCTTCTGTAG GCTTCAAGAA TCTTGAGATC TTCTCACTCG TCACCCGCCT
CTTGAGCCTG CGAGATGTCG AACCAGGACA TAATGGGACG ATCGGCTTTT GGGAGGGATT
ATTGGATTGA GCGCCTACTA GATAAATGTA CGTATTCGTG AGACCGCCAC TCAAAAACTT
TTAAGACTAC TTAATGACTC ATAACTTGGT CATATCAGCT GTACTCATCA CACACATG
 
Protein sequence
MPSIRESRAP IEPDDVWEHS NSDPEGNHDF NNVLHIDYIE GEALENMSEN AMLLGETSAP 
MEYDHRLRRG RGWVTISGFS LPKPLLYLLA VPPLLILVNL VASTYNSARP HAHYRHPTLT
NGTHPFHPTI LLLSLDGFRS SYLSTHAHLL PNLLFLSSSK WGLRAESMQP VFPTLTFPNH
WSLMTGLYPS SHGIVANDFW DPLFDEKENK GAQFVYTEES KSWDSRWWWG EPIWEVVEKV
GRKAAVIMWP GPPVTRAGAS PSYFVPYRNL PPSSKLSQIF AYLDHPLPTR PEFIASYFPE
IDQSAHRHGP DAPQVEEKLR MMDEMVGGLL RGLEERNLTG VVDLLIVSDH GMTGTSNERI
IYLDDILGED GIEAIEHKDG WPSVGLRFSP TSNHSLYLSR LLSAAEASNG TFAVYTPDTM
PQRWHFTGGR RIAPIYVVPD IGWAVTDRHE HEVLFQGDYQ PRGNHGYDNK YADMQAIFFA
HGPFARTLKD MGKGFISHDP PVLHSFKNLE IFSLVTRLLS LRDVEPGHNG TIGFWEGLLD