| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC00090 |
|---|
| Symbol | |
|---|
| ID | 3256787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | + |
|---|
| Start bp | 30765 |
|---|
| End bp | 31337 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | 638255230 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_569365 |
|---|
| Protein GI | 58264418 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4297] Uncharacterized protein containing double-stranded beta helix domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.269581 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACCGC TCACTCCTAA TCCTTTATCG ACTCTCCGGG TCACCAAGAA ACAAATACCC
TCCTACCAAA ACTTCCCCAA CACCGCACTT CATCGCCATC CTCTGATTAT CTACCATTCC
GCCTATCCGT CTTCTCTCAC TGCAGATCAG GTGGAGAAAC ATCTTTCCTC CGTCGGCGTC
GTTAAACCCG CATGGCGATT CCCAATGTAT CGACAGCACC ACTATCATTC CAACACTCAC
GAACTGCTCG TCGTCGTCTC AGGTGCTGGA ACGCTCTGCT TTGGCGGGCC GAGGGATGAA
GAGAACAAGA GCAGGACCGA AATTGATGTG GAGAAGGGGG ATGCCATGCT AGTCCCTTCC
GGAGTTGCTC ACGCGATGAT CGAAGATAAG GGAGGGTTTA GTATGGTAGG AAGTTATCCG
ATCGGAGCGA AGAACTGGGA TATGTGTACA GGCCAAGATG GGGAGAAGAA CGATGCTTGG
GAGACGGTGA AAGGAGTGAA GTGGTTTGAC AAGGATCCAA TCTATGGCGA TGAAGGGCCA
GCGATCAATA CCAGAGAAGG TGACGCGAAG TGA
|
|---|
| Protein sequence | MSPLTPNPLS TLRVTKKQIP SYQNFPNTAL HRHPLIIYHS AYPSSLTADQ VEKHLSSVGV
HHYHSNTHEL LVVVSGAGTL CFGGPRDEEN KSRTEIDVEK GDAMLVPSGV AHAMIEDKGG
FSMVGSYPIG AKNWDMCTGQ DGEKNDAWET VKGVKWFDKD PIYGDEGPAI NTREGDAK
|
|---|
| |