| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC00030 |
|---|
| Symbol | |
|---|
| ID | 3256326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | - |
|---|
| Start bp | 7518 |
|---|
| End bp | 10589 |
|---|
| Gene Length | 3072 bp |
|---|
| Protein Length | 637 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638255223 |
|---|
| Product | expressed protein |
|---|
| Protein accession | XP_569353 |
|---|
| Protein GI | 58264394 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTCCTCCTGC TGTCTCTCTC TCTCTCTCTC TCTCTTCTCT GATATACTAA CTAAATACAT
CACTGATACT TCTCCTCCTA CTACGCTCAC TGTCACCGGC GGTCATTGTA CTATATCTCG
GTTGCCAGCC TACACCACTA CATCTGCCTA CTACCGCGTA CTACATCTAC AACACCTTTC
CGCCACATAA CCACCACCTC TACCGGGAGG ATATAATCCC GATGGCTAAG GGAGTCACTC
GTAGTCGAGC CTACGACTAA CCTACGCTTG GCGCTACGTA CACCGCAGTT TCAAGCTAAT
TTAATTTCGA AACTTGACTC GTACCTACAC ATTGGACTAC ACTTCTGTCT TCTTTCTAAT
CCGGTCCTAG GCCAAAGTTC CCTGCGAGGG AAGAAATGCC AGGCTTTTCG GCTTAAACCG
AAACATATGC ATTGGGCGGC TACAACAATC TGGTGTTACG CACAGTAATA CGTAGTATTA
CGTAGGGCTT GAAGCAGCCA ATTGGGCGCT CGGAGCAAAA GTTGTATACG TAATGAATAT
CGCCACCAGG CACTCCGATA GATCGACGGT CGCTGTATTT TTTGGTCTCG CTCCGCCTCT
CGATGACTTC AATATCATCT TGTCATTTCT CATTCTTTCT TCGATTTATA AAGATACTTT
TTAATTTTGG TGTCGTCTTC AACGCTGAAT GTCCATACAT TCCATATCAG ACACATATTA
TACCGGCCCG ATCAATTCGA CACTCCGCGG ATTCTCCAAT GTCGTTCGGC TTTTCGGGAC
CGGTAAAGCT GCGCACTCGG ACGGGAAAGA TGTCGACGAA GAGAATAGTG ATGACGCGGA
CATTGATGAA GAAGGGTTAT TGTGGGATGC TCAGGTTAGT CAGGTACTTT TGTCTCGGAT
TCGGGGAACC AAAATCGAAC GCCAGCGCTA GCTGACATCA CTGCCTTTCA GACTGCACTC
ATCGCAAATG AACCAGAGAT AGCGACAAGA CTCTACGTTC AAGCAGCTTT ACCACCTTAT
TGTTCACCTT CAGCATGTCT TGCGCTCGGC AACCTACTTA TCAGAAGTTC AGTGTATATG
GAATCACCAT CAGCTCCAAT ATCTTCATCC AACGAGTTGA CATCAGGAAG ATCTGGAACT
TCTTTGTGGA GCAAGCTCTT CGGCACAATT TCTACTCCTC AATCTCCTTC ATCAGCACAT
TCATCTTCAC CCACAAGGAA GCGTATTGAC CTTGTCGCAT GCGGCTGGCA GATGCCAAAA
GTTGGGAAAA GAGCAGTCCG TGATGTTGAA GGGATGGGCG TCGCTGGAGC CTGGTTTGTT
CTAGGATTGG GATGGGTTGT TCGAGTGGAG ATGGAGCGTG AAAAGCGATT GCGAGGAAAA
GTGGTTATAA AGCCTTCGAA GGAGACATTT GAAGATAGTG AAGAAGAAGC CATCTTCACA
AAGAAAAAGG GAAAAGGGAA TGGGAGGCTC CACTCGTCAA CTATTTACAT CGCGCCTCCT
CAACGTGCCG ATGACCCCTT TCCAATTGTA GCTGGGAACC CAAAAACAGC GCTTAGCGAA
TCGACCAAAA CTGAAGAATC TTCGCTGATT GGGACTCCGG CTATGGGCGA CGTAGAGTCG
CTCGAGGACG AAGATGAAAG TGAAATGGAG AGCCTCAGTA TCATGGTATA TCTTTTGGTC
CTACTTCGTT TGAAATGTGT TAACTTTTTG TAGTATGATC TACTTAGTCC ACTTCTCCAT
CTGTACCGAT ACGGCCATAT TCAATCCCAA GATCCCGTTG CGCTTCCTCC CGTATCCTTG
CAGCAGCTTC CTCCAGCATT GCGGCCGAAG AATGAGGCGG ATAAAGGAAG GAATGTCTGG
TGGTTAGGCA GGGTGGTAGC GCAGCAGTTA ATCAAATTGG ACATATTGAA AGCTGCGAAA
GGTAAGGGAC AAAAAGAACA ATTGAGGAAA GCTGTTGGTG TGTCAGTAAA CTATATCGTA
AGTGATAATT CATTTCCATA TAAGATGGAA ACTGACTAAA GCAGATTGCG ACAACATCCC
CTGACCTCCA AGCTGAGATG TATTTCCGCT CTATTGCGTC TACCCCCTCA ATAGGACTTG
AATATGCCGA CGACCTGGTC ACCAATGCGA AGAAGCGTTT GCAGATCATC ACCAGTACAC
CTCGAGATGA GAAAATGCTG CGATTTTTCC CATTCCCTTC CATGCTTGAC AAAGCTTCGC
CGCCCAACCC ACAGAAAACG TCCATATCGT CTCCAAGGTC GATTTTGACT CCTCCGAAAG
TGATGGTACA ATCTGCAAAG TCGACTGTCA GTCTTGCAGC CTTGGCAGGG GAAGAAGAGG
TAGCGAGTCT GGTGGCGCCT GGTCCCAAGA AGTTGGGGGC ATTGGATACA TTAAAAAGGG
TTCATGAGAA GGCGGTGATG CAAGATGAAG AGGTTGGCCG AGAAGAGGTT CATGATGAAC
CAGGAGTCAG CTATTCAGAA GTGCGACCAA CCATTCGTCG AGTTTCAACT TCCCCTCATC
TCCAAACCCA CCTTCATCCT CCTCCCTCTT CATCGCGCAC TCGTCGCCGA CTCCCGTTTG
AACTCCCTTC CTCAGAACCC ATTGCCCCTG TCGATCCCGT CCTTGCCGCC GCAGAGATGT
CTAGCGCCTT GACAAAACAC GTAGTATGCA ATGTTTGTGG GATGAAGGGT GTTAATTTTC
CGGAATGTAG AAAATGTGGA CTGAGGTTTT GTTCCAGGGA GTGTAGAGTT GGCGAAGATA
GGGCGGGTAA TGGGAAGAGG TGAGTTCTTT CTTGATTCGC TAAGTAACTG ATGCTGACTA
TTGGTAGACA TATCTGTGGG TTATCGGAAT CTAGGAGAAA CCATGGGGGG TTGAGCCATG
GGATAGAATA TGGTGTAGTG GGTGATGTTC ATTAACCTGC TTTACTGGAG GGAAGAATGT
TGCGACATAC AGCGTTGACA TACAGCGTGC AAGGTTTTAA GGAATATAAT TGTATTGTCA
TAAGGTTACT TTCAAAACAA GTGAAGAGCT GTTGCTTGCA TAGATATCAT ATATTCAACA
TATGGGGTAG CC
|
|---|
| Protein sequence | MSIHSISDTY YTGPINSTLR GFSNVVRLFG TGKAAHSDGK DVDEENSDDA DIDEEGLLWD
AQTALIANEP EIATRLYVQA ALPPYCSPSA CLALGNLLIR SSVYMESPSA PISSSNELTS
GRSGTSLWSK LFGTISTPQS PSSAHSSSPT RKRIDLVACG WQMPKVGKRA VRDVEGMGVA
GAWFVLGLGW VVRVEMEREK RLRGKVVIKP SKETFEDSEE EAIFTKKKGK GNGRLHSSTI
YIAPPQRADD PFPIVAGNPK TALSESTKTE ESSLIGTPAM GDVESLEDED ESEMESLSIM
LPPALRPKNE ADKGRNVWWL GRVVAQQLIK LDILKAAKGK GQKEQLRKAV GVSVNYIIAT
TSPDLQAEMY FRSIASTPSI GLEYADDLVT NAKKRLQIIT STPRDEKMLR FFPFPSMLDK
ASPPNPQKTS ISSPRSILTP PKVMVQSAKS TVSLAALAGE EEVASLVAPG PKKLGALDTL
KRVHEKAVMQ DEEVGREEVH DEPGVSYSEV RPTIRRVSTS PHLQTHLHPP PSSSRTRRRL
PFELPSSEPI APVDPVLAAA EMSSALTKHV VCNVCGMKGV NFPECRKCGL RFCSRECRVG
EDRAGNGKRH ICGLSESRRN HGGLSHGIEY GVVGDVH
|
|---|
| |