Gene CNB05760 details

Gene Information

• Locus tag: CNB05760
• ID: 3255806
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006684
• Strand: +
• Start bp: 1614698
• End bp: 1615848
• Gene Length: 1151 bp
• Protein Length: 259 aa
• GC content: 49%
• IMG OID: 638255218
• Product: glucose 1-dehydrogenase, putative
• Protein accession: XP_569317
• Protein GI: 58264322
• COG category: [I] Lipid transport and metabolism; [Q] Secondary metabolites biosynthesis, transport and catabolism; [R] General function prediction only
• COG ID: [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.0117369
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCTTCG GTCTACTCCA GGGTAAAGTC GTCGCCATCA CAGGCTGCTC AACAGGTATC 
GGGCGAGCCA TTGCCATCGG TGAACCATCC TGTTTTACAC TCCTAAAAAC CTACGAACTG 
ACGCAGACAT CCAGGCGCTG CAAAAAATGG GGCCAATGTC GTTCTGCACC ATCTTGGGGA 
TTCGACCGCT AGCGATATCG CTCAAGTCCA AGAAGAATGT AAACAAGCTG GCGCAAAGAC 
TGTGGTGGTA CCAGGCGACA TTGCTGAAGC TAAAACTGCC AACGAGGTAA ATTGAGACCG 
TCTTCTTATA TCTCTTCCCA AAGTGATTCG CATAACCGCT GACGACCCTT AATTATTTCC 
CCAGATCGTC TCAGCCGCCG TCTCCTCCTT CTCCCGCATC GACGTCCTCA TTTCCAATGC 
CGGTATCTGC CCCTTCCACT CCTTTCTTGA CCTTCCTCAC CCTCTATGGA AACGCGTGCA 
AGATGTCAAC CTAAACGGTT CTTTCTACGT TGTTCAAGCG GTTGCTAATC AGATGGCAAA 
GCAAGAGCCT AAAGGAGGGA GTATCGTTGC GGTGAGCAGT ATCTCGGCTT TGATGGGCGG 
TGGCGAGCAG TGTCATTACA CACCGACAAA AGCCGGAATC AAGAGTTTGA TGGAGAGTTG 
TGCGATTGCG TTGGGGCCAA TGGGGATTAG GTGTAACTCT GTTCTTCCTG GTACGTCCTA 
TTTTCTCGTT CTTGCCCTCG TCCTCTTTCC ATTTCCCATC ACACTCCTGC TTATAGTCCC 
TTGTGGATGA GAATGTTGGC TGAATCACAT CAAATCTGAA ATAGGGACTA TCGAAACGAA 
CATCAACAAA GAAGACCTTT CCAACCCCGA GAAACGAGCA GACCAAATTC GACGTGTCCC 
CCTTGGCAGA TTGGGTAAAC CGGAAGATCT CGTAGGACCT ACTCTATTCT TTGCGAGTGA 
TTTGAGCAAC TATTGCACCG GAGCGAGCGT GCTGGTAGAT GGCGGAATGG CGATTTCTCT 
TCAGTAAAGT AGAGAAGAGC CTGTGAGCTG TTTATAACTA GTACTTAGTA CCGTGATGTG 
CGTACGCATG CTAGACCATC GCGATTTTCT AATTTCATAC TCAGTCCTAT ATGTAAACAA 
CAAGTCTGTG A 

 

Protein sequence

MSFGLLQGKV VAITGCSTGI GRAIAIGAAK NGANVVLHHL GDSTASDIAQ VQEECKQAGA 
KTVVVPGDIA EAKTANEIVS AAVSSFSRID VLISNAGICP FHSFLDLPHP LWKRVQDVNL 
NGSFYVVQAV ANQMAKQEPK GGSIVAVSSI SALMGGGEQC HYTPTKAGIK SLMESCAIAL 
GPMGIRCNSV LPGTIETNIN KEDLSNPEKR ADQIRRVPLG RLGKPEDLVG PTLFFASDLS 
NYCTGASVLV DGGMAISLQ