Gene CNB05600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB05600 
Symbol 
ID3255569 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand
Start bp1574729 
End bp1575968 
Gene Length1240 bp 
Protein Length322 aa 
Translation table 
GC content50% 
IMG OID638255202 
Productdolichyl-diphosphooligosaccharide-protein glycotransferase, putative 
Protein accessionXP_569303 
Protein GI58264294 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.00648323 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTTTA CATCGCTTCT CGCCGCTGTC CCTTTTCTCT CGTTGGTCGC CCTCGCAGCA 
GACCCGGCTC ACTGGTCAAA ACTCGCTGCC AAATCTCGTG ACGGTGTCAT CAAGCTTGAC
TCCAAGACCT ACGATGATAT CCTCGCTCTC GATAGGGAGT ACAGTGTCAC TGTATTGCTT
ACGGCTATCC CTGCTCAATA CAAATGTCAA CCATGCCAGT GCGTACAACA CCCATCGTCC
ATCTTTTCTG GTCTGCGTCT TTCCGCAGTC TAGAAAATAC CGACCCTTTT TCCCTTGAAC
ATCGAAGTGT GCCGGAGCTG ACGAAAGGAT TTGACTAATT TTTACACTTG CAGAGTGTTT
GACCCGTCAT ACAGCCAGGT AGCCGATAGC TGGGCACGTC TTCCTAAATC CCAACGAGAT
CAACATTTCT TCGCCAGGCT GGACTTTGCA GATGGCCAGG CCATTTACAA CCAGTTGGGT
TTGACCTCTG CGCCTACGGT CATGTACCAC CCTCCATTGG CCGGGCCTAG GAGGAACAAC
AAACTTTCCG TCATCAATTA TGATTTGAAC AGAAAGTGAG CTCGGAAAGA TTACCTTACA
AGCCTTGCTA ACATCTAACA CCGTAGTGGT CTGTCTGCCC CTCCTTTGCA CTCTTGGGTT
TCCGGTCTTA CTCCCTCGCC TTTCGAGCTT CACACTCCTC TCAACCCTTG GCCCTTCATC
TTCGTCCCCC TCTCCCTCAT CGCTATCGGC GTCTCCGCTT ACTCTTTGCG CTCCATCCTC
GTTCCACTCA TCCAATCCCG CATTGTGTGG GGCACCGCCT CGATCATCTT GATCTTGACT
TTTACAAGTG GTTATATGTG GAATAAGATT AAAAATGCGC CTTATATTGC TGCAGGAAGG
GATGGGAAGG TCCAGTGGAT TGCGGCGGGG TATCAAAATC AGTTGGGATT GGAATCTCAG
GTTGTGGGTG CGATCTGTAA GTTTTAACCG CTTCTATGGT TTTCTTTCAT TTCCATTCCG
CGTACTTGTC TTGTCATTGC TGATACATGT TTGTTATGCA GACGGTCTCC TTGCATTCTC
CATCGTCGCG CTCTCTGTCC TTGTCCCTGC TCAGACATCT GCCGTCAAGC AGCGTGTCGG
GGTCTATCTG TGGCTCGGTA TGCTCGTTAT AGTGTTCAGC TTACTGATGA AGTTGTTCAA
GATGAAGAAT GGCGGTTACC CCTTCTCTTT GCTTTTCTAA
 
Protein sequence
MRFTSLLAAV PFLSLVALAA DPAHWSKLAA KSRDGVIKLD SKTYDDILAL DREYSVTVLL 
TAIPAQYKCQ PCQVFDPSYS QVADSWARLP KSQRDQHFFA RLDFADGQAI YNQLGLTSAP
TVMYHPPLAG PRRNNKLSVI NYDLNRNGLS APPLHSWVSG LTPSPFELHT PLNPWPFIFV
PLSLIAIGVS AYSLRSILVP LIQSRIVWGT ASIILILTFT SGYMWNKIKN APYIAAGRDG
KVQWIAAGYQ NQLGLESQVV GAIYGLLAFS IVALSVLVPA QTSAVKQRVG VYLWLGMLVI
VFSLLMKLFK MKNGGYPFSL LF