| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB05580 |
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| Symbol | |
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| ID | 3255590 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006684 |
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| Strand | - |
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| Start bp | 1568550 |
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| End bp | 1571176 |
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| Gene Length | 2627 bp |
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| Protein Length | 776 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638255200 |
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| Product | small nucleolar ribonucleoprotein protein, putative |
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| Protein accession | XP_569301 |
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| Protein GI | 58264290 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG5384] U3 small nucleolar ribonucleoprotein component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.676821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCG ATCAGCAACC GCTAGATCAG CCTATACATC AGGCGATTAT TGACCTCGCG
CAAGAACTGG AGCAGAAACC ATGGATTCTG GCCTCTGGAG GCGACGAATC TGTCGCCGAG
AAATCTCTTT CTGCCGCTAA AGCAATTTTC GACTTGGGTA CGTTCATTAT CATTATTGTG
TGGTAGCAAG CCCTCCGGAA TTAACTTCAG ACACAAGGCG TCTCACTTGA ACCTATCTCA
CACCCTCATC TCCATCCTTT CCTCCTCTCC GTCCTCGAGC CTCCCTCAAT TAACCTTCGT
TCCAGATCCA AGTCCGAACA AGATGAACCA GAAACTCAAG AGGCACCTAC TCCCGAGTCT
GTCCTCCCCT ATACACCTCT TTCAGTCCTT ACTGTTGATG GATTTGACCC AGAGCAAGTC
TGGGCTCAGC TCGAGCTGAG GGCTCATGGA ATCGTCAACG CCGTCAAGTC AATCGATGAT
AGCAACGGTG ATGCTGAAGA AGATTTTGAG GGTAACCCAG GGTCTGATGA TTCTGATGAA
GATATGACGC TTGAGGAATT CCGGGAGATG CTCAAGGAAG CCGGATACGA TAACGTTGAC
AGTATGCCGG ACGAAGAGTT GATTGAGATG AGAAATGAAA TGGAGGGTGG TGAAGATGCC
ATGAGCCTGG AGGAATTCAG AGAGATGCTG AAAGAGTCTG GGGAAGATGT GGACGACATG
ACTGAGGAGG AACTGATGGA AAGGATGGAT GAGTTTGAGG GTGATGAGAG CGATGATTCA
GAAGAGAGCG GCAGCGGCAG TGACGAAGAT GAGGATGATG ATGATGAAGA GGGAGACGAG
GACGAACTTT TAGCTTCCGC CTCTGAAGGC GAAAATGACG AAGAGGTTTC AGTCGGTGAT
GATGAAGATG AAGATGAGGA GGACGAGGAC GAGGATGAAG AGGATGAGGA GGAAGAAGAG
GAGATCCAAG TTGAGGACCA AGGCAACTCT GAAGATGACG ACACTTCTGC TCTCTTCGGT
TCCACGGCCG GTCCCTCCAA ACCTCGTAAG GGCCACCACC CGACTCTCGA CGACGACTTC
TTCTCCATCG ACGAGTTCAA CCGTCTCACA GAAGAAGCCG AAGCTGGCCG TTTGACTTCT
GGTAGGTTGG GCGGAGATGA AGATGATGAA GAGGAATTGG GCGATGTGGG AGCTTTGATG
TTGGATGGTG CTGGAGATGA TGAGGGTAAG CCCATAACCT ACCGTCGTGA TTGGGAAGAA
GTGCGGTGCT GATCTTGAAC AGAAATTGGC TATGCCGACT TTTTCGAACC TCCTCGAGGC
GCCAAGCAAA CAAAGGGAAA GAGTAACGGT AAAGAGAAGA AAGGCAAGGG CAAGAGTAAA
AGCAAAGTCC GGTTTGATGA TGATGAAGTA ATGGATGAGG ATGAAGAGAT GGCTCACGAG
GAAGTGGAAG ATGATGATGA GGCAAGAGGG ATCATGGGCA GAGTTAAAGG TGATCTGTTT
GACAGTGATG ATGAAGAGGA TCGAGAAGAT CAGGGTACGT GTCAATCTCC TTTCTCTGCG
ATAAGCGTCT GACAATCAAT CTTCCAGTTC TTTCCACACA CGAAAAGCGT CAGAAAGCTC
TCGCAGAAGA AATTGCCCAA CTTGAATCAG AAGCTGTCGG ACCCAAAGAA TGGACTTTAC
TTGGTGAAGC TTCATCTCGT ACTCGACCGC AGAATTCGTT GCTCGAGGAG GATCTCGACT
TTGAGCATGT GGCCAAGGTT GTGCCTGTCA TCACTGAAGA CAGCGTCGCG ACGATGGAGG
AGCTCATCAA ACAAAGGATC TTGGACGTGA GTTCATCTTT CGTTGGAAGC AGTTGGTTCT
GTAAAAACGC TTTATGCTTA TCCCATTATA GAACAACTTT GATTCCCCTG TTCGTGTTCG
AGCATTCGAA CCCACTCCTT TCCTTCCTTC TCGATTCTTT GAACTCCAAG ATACGCAGTC
TTCCAAATCC CTTGCTCAGA TTTACGAAGA AGAATATCAA GCCGCTGCGT CTGGGGAGAA
GGTCAAGGAT GCAAGAGACC AAAAGCTGCA AAAGGCTCAT GAGGAGATTG AAGGGTTATG
GGGCGAAATC TGCTACAAGC TCGACGCGTT GAGCAGCTTG AACTTTGTGC CCAAGGCGGT
AAGTGCTTTT TTATCCATTC ACTTAGAATT GGAAAAAAAA AACTGATACA TGCTCTCAGC
CCAAGGCATC TATCACAACC ATCTCGGATC TCCCTACAAC CTCCATGGAA TCCGCTCTGC
CACCAACGGC CGCTGCTTCT ACCATGCTTG CCCCTCAAGA ACTCTTCGCA GCCCCTTCAT
CTACCGATCT CGTTGCTCGC TCAGAACTTA CTTCTGAAGA AGCTCAGAAA CTTCGAAACA
AGCACCGCAA GCACAAGAAG GCAGAGCGAA AGAAGTTGGG AGAGATGGAA GAGCTCTATG
GGAAGAAGAG GAAGAGCGCC AGGGAGGAGA AGGAGGAGGC GTTGAAGGGG TTGGTGAAGA
GTGGGAAGGG AGTGACTGTT ATTGGAAAGG GTGCGAAGGA GATGGAAAAG GGCAAGAAGA
GAGGAACGGA AGGAGAAGAA CAGGACGGCA AGAGGTTGAA GCTGTGA
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| Protein sequence | MSADQQPLDQ PIHQAIIDLA QELEQKPWIL ASGGDESVAE KSLSAAKAIF DLGVSLEPIS
HPHLHPFLLS VLEPPSINLR SRSKSEQDEP ETQEAPTPES VLPYTPLSVL TVDGFDPEQV
WAQLELRAHG IVNAVKSIDD SNGDAEEDFE GNPGSDDSDE DMTLEEFREM LKEAGYDNVD
SMPDEELIEM RNEMEGGEDA MSLEEFREML KESGEDVDDM TEEELMERMD EFEGDESDDS
EESGSGSDED EDDDDEEGDE DELLASASEG ENDEEVSVGD DEDEDEEDED EDEEDEEEEE
EIQVEDQGNS EDDDTSALFG STAGPSKPRK GHHPTLDDDF FSIDEFNRLT EEAEAGRLTS
GRLGGDEDDE EELGDVGALM LDGAGDDEEI GYADFFEPPR GAKQTKGKSN GKEKKGKGKS
KSKVRFDDDE VMDEDEEMAH EEVEDDDEAR GIMGRVKGDL FDSDDEEDRE DQVLSTHEKR
QKALAEEIAQ LESEAVGPKE WTLLGEASSR TRPQNSLLEE DLDFEHVAKV VPVITEDSVA
TMEELIKQRI LDNNFDSPVR VRAFEPTPFL PSRFFELQDT QSSKSLAQIY EEEYQAAASG
EKVKDARDQK LQKAHEEIEG LWGEICYKLD ALSSLNFVPK APKASITTIS DLPTTSMESA
LPPTAAASTM LAPQELFAAP SSTDLVARSE LTSEEAQKLR NKHRKHKKAE RKKLGEMEEL
YGKKRKSARE EKEEALKGLV KSGKGVTVIG KGAKEMEKGK KRGTEGEEQD GKRLKL
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