Gene CNB05530 details

Gene Information

• Locus tag: CNB05530
• ID: 3255908
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006684
• Strand: -
• Start bp: 1553586
• End bp: 1557293
• Gene Length: 3708 bp
• Protein Length: 1010 aa
• GC content: 49%
• IMG OID: 638255195
• Product: exonuclease, putative
• Protein accession: XP_569296
• Protein GI: 58264280

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00532116
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CATGGTTTAA TCACGCACTA CCTTTACACA TCAAACAGCC ACCATATGAT ACGGCCCAGA 
TCACTCCCTC TTCGGTACCC AAACCGCTCC TTACCTCTCT TCCGATTCCG CAACCACCTC 
ATTTCCCGTT CCATTCTTAC CGATTCATCC ACTGCTTTGC CCACTTCTTC GTCATCAGCT 
CCTCGAAGCA CGGCATCATT CTACATCTCC AACGTCTTCC CTATTCAGCT GGGAAGATTG 
GATTTCAGGC CCAGTATTGC TTCTTTTCTT AGAGAAGAAG CGCTTCTCGA ACATCTGCAT 
GCCATTGCAA ACGACGTTAA AGTCCATGGG TTCCAAGTTG AAAACTGGGA AGTCAGCAGG 
AAAGATGGGG GTGTGTTCTT ACATTTTTCC TATATCGCTC CAACAGAGGA GCAGACTTCG 
AAGGAAGAAG AGAAGGTAGA TGAGGAGAAA GCTGCCAGGA TCGGTGTGGA GTCGACGCCC 
TCGTCCTACA CACAAAACCA GCCTGGTCGG TTATTCATAT CTCCTCTAGA GGAATCAGCC 
CAGAAACATG GAGGATGGCC CAGCTGGTTA GGCAACTGGT GGGCGCAGAA AAAGTGGCAT 
GACGATAGAA AAGTACCCGG TCATACACTA TACTCATCAA GAGCGGAGGA TGGTGAAGAT 
GCAGCGATGG ATGGAGATGA AGGGGGTTTA GTAAAGGGAA GCGCAGGGGC CGTGAAGGGA 
CTGCAAGGCG CTGCTGGGGG TGGAAGAGTA TGGGTTGTAA AGGGCAAGCA ATGGACAGAG 
GTAAGCTGAG GCTTTTATAG ACCGGGGAAA AGAGAAAGCT AATGTGTCAT AGGATATGAA 
TCGCTTCCCA TCAAACAGAT TGAGAGTCGA GTTCGACGGG CCCGATGTCT CTCAGGAAAT 
GCTATATACG CTCTTCCGAG TAAGTACTAT CTACCATTGA ATGATCCATT TCTTAACTTT 
CGTGAAGCCA TACGGTCGTC TGGCAGATAT CCAGCCCCCT ACTCCTGTGC CAGCAGGCTC 
GCTGCGTTTC GCATCCGTTT CATTCTCGCG CCTCTCTCCT GCAGCTATAG CAATCAATGC 
TGTAAGTCCT AATTGCTCTC CCATGTATGA TGAATTAGGT CTAATTATGC CGCCTTTATA 
GCTTCACGGA TATTCAACGC CGACTAATAC AGCAGATTTC ACCATTCGCG TTCTCTCCTC 
GGCCACTGAT AAACCTATCC CATTGAGCAG GCTTAGGTTA TTCTACGAAA GGCCATTGAA 
GGCTCACGCC CTGAGAGACT GGATAAGTTC CCATCCCAGA CTCGTTCTTC CAGTGGTTGC 
CTTTTTAATT GGTACCTTGA GTTACACTGT GGGTTCTAAA CACGGCAAAC GTTAGAGAAG 
AAAACAGCTG AAGCAAGGTT ATAGTTCTTT GATCCTATCA GGGCATTCTT TGTGCGATCT 
AAGCTTGAAG GTGTATGGGA TATCAACGAA TACTCTCTTA TCAAAAGTAA TTTCCTTCCT 
CTTCCCTTCC GTTGATTGTT CTATTTTAAC TAATCACACA TCATAAACAG CACTTCGTCA 
GAAGTTTGTA CTCCCAACTT CATTCGGCTT CCTCAACTCT TCAACTTCAG AAACAGAGAA 
TTCAGAGGAA GCTATCGGCA AGAATGCATG GGCGGACAGG ATTGAAGCAG AGAAGGGTGT 
GGAACAGTGG CTGGCAGAGT ATCCTTCGAC GTTCATAACC ATAACCGGTC CACCTGGTAG 
CGGAAAATCA AGCCTTGTGA CAAGAGTGTT GAAGCAGCAG GATAAGTGAG TTTGCAGCCT 
TATTATTTCG CTAGGCAAAA GATCTTTTTA GCTGACAGGC AGGTGCTTAG GCCGGCGATG 
GTCATTGATT GTGAAGAGAT TGCGAAAGCA AAGAACGATG CTGGTTTGGT CAGTGCCCTA 
GCAGACCAAA CAGGTGAGCT TTTGAGCCCT TCCATGCAAG GACTTTTCAG CTAACATAAG 
CCAAGGTTAT TACCCGGTCT TCTCATTCAT GTCATCCCTT TCCGGACTCA TCGACCTCGC 
CGCTGTCGGC CTTATCGGCC AAAAAGCAGG GTTCTCCACG CCTGTCGACC AACAACTTCG 
TCAAATGCTC GAAATCGTCG GTGGCGCTCT CAAAGACGTC TCCACCCATG CCCAAAAGTC 
TCATCAGGAA GCATTCCAGG CTCAAAAAGA CCAAGTTGAG ACTGATAAGA TGAGGCAGAG 
AAAGAGACAG ATGATCGCAA GAGGTTGGCA CGATGGAAGA CTGGATTGTG TAGCCGGTAA 
TGGCTTGAGT GAATTGGGGG TCGGAGATGA ACCGTTTGAG GAGCAAGATT GGGATAGCGT 
CCCGTTAGCG GTCCCTATGG GTGGAAATGT AGCTCCAATC CAGGGTGATA CCGTCCTTAC 
TTCCCTGACT GCCTCAACAG ACAAGGTCGA ATCTGAAAAA CTCGAGCTGC AAACGACGGC 
ATCCACAGAA CTTGATGTCG AAAGCGAAAC AATCAAGTCC CTCCCCATCG TTGTCCTCAA 
AAACTTTGCA CAGAAGACTG CGAAAGGTGA TCTATGGAAT GTCCTTGCGG AATGGGGCGC 
GAGTCTGGTA GAGAACAAAG TGGCACATGT GATAGTTGTT ACCGAAGGTC CAACGGCTAC 
CAAGGCGCTG ACAAAGGCGT TACCGGCCAA GCCGCTTAAT ACAGTAGGAT TAGCAGATGC 
GGATGAGGTG AATGCCTTGG CATATGTAAG GGACAAACTT CGACCGCACA CAGCTGCGAC 
CACGACTACC ACCGCCTCTA ATTCAACTAG TACTGCGAAC GCCGGCAATG AGTCTCAAAA 
ACAGGGCTCG GATCCCAAAG CTTATACTCT TTCTCCAGAG GATAGCGCAC AGATAGCCAA 
GTTGGGAGGT CGTATGGTCG ACCTCGAAAA TTTGGTGTAC AAGGTTCGAA CTGGATCGAA 
GATCAAGGAT GCGGTGGATG ACATCATTCT GAGGAATGTG GTAGAGCTGA GAAAGGCGGC 
GTTTGGAGAT GACAGTGAGG ATGCAAAGGC GTTGCAGTGG ACCAGAGCGC AGGCTTGGAA 
AGTTGTCTCT GAACTCGCTA ACAAAGGAGA GGTAGGTTAA TCGTCTTTGC AACACCCAGA 
AAGTTGCAGG CAAGCTGATG CACGGTTCCG TCCGATAGAT ACCGTATAAC AAGATGCTTC 
AAGAATTCCC TTTCAAAGGC GCTGAACAGA GTTTGAAGGC GCTTGAAGAG CATGAGCTGG 
TGTCTGTGTC GTATATCGAT GGACGTGCAT CAATGGTCAA GCCTGGCAAA CCCGTGTTTA 
GATACGTCTT CCAAGCACTC GTCAATGGTA CGTTACACCG CCCGCTTCAA TCGCGCAAAG 
CATCACAAAC TGGCTGCCCA GAGGATGAGC TGATGACAAA TCTTCTTGTT TGTAGATCCC 
ATTTTCAAAT CATCATGTCA AATCGAGTAC AACAACGCCA TCATCGCCAA ATCCGAATCC 
GATATCAAAG CATATGAGCA AGAACTGATG AATCTCAAAA ACATCACGAC GGAGGGTGGC 
TCCAACGCGA TTGGAGTTTC GGGCGGATGG CTGGGTTTGG GTGGAAACAG TGCGATTAGA 
GATAGGGGGA AATGGTTATT GGATAAAATG GGAGGATTGG TTGACAAGGT TGGTAAGCTG 
GAGAAAGAGA ATGCGGAGAT GGTGAAGGTG TTGTCCAGTG GGCGATAA 

 

Protein sequence

MIRPRSLPLR YPNRSLPLFR FRNHLISRSI LTDSSTALPT SSSSAPRSTA SFYISNVFPI 
QLGRLDFRPS IASFLREEAL LEHLHAIAND VKVHGFQVEN WEVSRKDGGV FLHFSYIAPT 
EEQTSKEEEK VDEEKAARIG VESTPSSYTQ NQPGRLFISP LEESAQKHGG WPSWLGNWWA 
QKKWHDDRKV PGHTLYSSRA EDGEDAAMDG DEGGLVKGSA GAVKGLQGAA GGGRVWVVKG 
KQWTEDMNRF PSNRLRVEFD GPDVSQEMLY TLFRLHGYST PTNTADFTIR VLSSATDKPI 
PLSRLRLFYE RPLKAHALRD WISSHPRLVL PVVAFLIGTL SYTFFDPIRA FFVRSKLEGV 
WDINEYSLIK TLRQKFVLPT SFGFLNSSTS ETENSEEAIG KNAWADRIEA EKGVEQWLAE 
YPSTFITITG PPGSGKSSLV TRVLKQQDKQ KIFLADRQVL RPAMVIDCEE IAKAKNDAGL 
VSALADQTGY YPVFSFMSSL SGLIDLAAVG LIGQKAGFST PVDQQLRQML EIVGGALKDV 
STHAQKSHQE AFQAQKDQVE TDKMRQRKRQ MIARGWHDGR LDCVAGNGLS ELGVGDEPFE 
EQDWDSVPLA VPMGGNVAPI QGDTVLTSLT ASTDKVESEK LELQTTASTE LDVESETIKS 
LPIVVLKNFA QKTAKGDLWN VLAEWGASLV ENKVAHVIVV TEGPTATKAL TKALPAKPLN 
TVGLADADEV NALAYVRDKL RPHTAATTTT TASNSTSTAN AGNESQKQGS DPKAYTLSPE 
DSAQIAKLGG RMVDLENLVY KVRTGSKIKD AVDDIILRNV VELRKAAFGD DSEDAKALQW 
TRAQAWKVVS ELANKGEIPY NKMLQEFPFK GAEQSLKALE EHELVSVSYI DGRASMVKPG 
KPVFRYVFQA LVNDPIFKSS CQIEYNNAII AKSESDIKAY EQELMNLKNI TTEGGSNAIG 
VSGGWLGLGG NSAIRDRGKW LLDKMGGLVD KVGKLEKENA EMVKVLSSGR