Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNB05440 |
Symbol | |
ID | 3255928 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006684 |
Strand | + |
Start bp | 1532276 |
End bp | 1534037 |
Gene Length | 1762 bp |
Protein Length | 452 aa |
Translation table | |
GC content | 51% |
IMG OID | 638255187 |
Product | hypothetical protein |
Protein accession | XP_569289 |
Protein GI | 58264266 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00204692 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTATAT TTATACTACG CGCGTGGACA GGGACGAACG CGGTGCACCG TGGGAATGTT TTGCGGGGAA AGGTCCGGGG CACGCAGCTG GTTCGGCATG GATGGCGTTG TAGAGAAATA CTAGGCTCGA CACAAGCCCC TCGACGGACA TTGGCTCAGA ACTTCGTGCG TCACCAAGCG TGTGCAATCT CATCTCCAAG CGTAAGCTTC AATTCTTACA AAATATGGGA GAAGCTGACG AGTTCGATGA CTCAGCGTAC GAATCAGCAA GACTATCTCA ATCTTCGACC TAGTTTGGAC GCTTCTTTCA GTAAAATGCC TCGAAGTAGT AATCGCAGGG CGCCCAGGTG CAAAATAGTC ATGCACTTGC GTTCCTAATT GAGGTCTTCA CTGGAAGGCT TATTATCCCA TTTTAGCCCG TCCAGCAATA ACTATCGTAG GACAAACGAT GTCATCGAAG CAGCACCTAT AGGACCAGAA GCGACCTTGG TGAGTGCCCG GAAGATGGAC ATGAGCCGTG TAGCTGCAAC AATGGGTTAA CCTATGGTCA TCGTAGCCTC AAATTGCTGC CCCTACCCTT CCATCTGTAC CCCTTTCCGA TGATTCCGTC TCCGGTGACA TCTCGATCCC TCGATCCTCT CCCCCTGCTG GCCAGTCCAT GTCTTTATCC GATGATGCCT ACCCTCCTTC TCTCTCAGGT CAAAAGACTT CACAAGGCGG TCTCGAAAGA GAGTTTATGG ATATCGATGA TAGGCAAGGC TATGATGATC TTCCTGCCAT CATGATGGAT GAGTCTCTTC TTGAAACAGG TTTTGAGGGT GATGGATATG GAGGTGTCAT CCGTGATCGT CTTGGCCATC AGCTTAGCAA ATGGCCTACC AAAGTTCCCG AATCCTTGAT CCCTCCTTAC TCGTGTCGGC AACCCAGCCC TTATCAAGAT GAACCCATCT TCTGCATCGA ATCAACTGCA AGGAATATGC CTCTACTTGC CACCGTCCTT GCCGTCTTCT CAATCTTCCT CACGGCTTTT GCAGGGCTGC CTCAGCGATT GGGCGACATG GTGAAGGCTG TCATTCAGGT CATTCTTGAA CTGGCTATCG CTGAGGGTCA ACAAGCGTTG CGCCGGAGAG TACGCGGCGG GAGCGATTCC TCAGGACTAT CTTCCCCGCA TGGCGCAACA GCCAGGCCCC CCTGGAGGCG AGAGTATCAC CGACTCCTTC AGTTCCATCA CGAGCTAAGG GTTCGCGGCT ATCGTTTTCG ACCCCTTGAC CCCACCTTCA AGGAGGAGTG GATAGTCGAT GGTGCGACGC AGTTACCTCG TCTCAACAGG AAGAATGCGT GTTCCTTTGT AGAGTGCCGC CCTCCCCTAC GTCGCTTTGG TGACTTTCAT CAGCCGACTA TGACGGGCAT ACTCTGGACC GTCTTCTCCC ATATCCGACG AGCTTCTGAT GGAAGGATTT TGTCCCACCG ACTCTTTGGC GTTTTCAGGT GGTTCAAGCC CTCAATCGCT TACGGATACC GGTATGATGA AGAGTAAGTT CTTCTTTGAA TTGGGTATAC AGTCATTAAC GACCTTGACA GGAAAACACT AGATATCCAG GTGTTTTCTC AACATCAACT CTCCCCTCCT TTCTTCTTCC CGATCCACGC GAAATCGTTA CCTTCCATCC ACCCAGTCGC ACTGGTTAGT GTTCCGCAAA GATCTTCGGC ACCATTAGGT ACCAAGATCA TTGTGACTGT CCCAGTTGCC CGACATACGT GA
|
Protein sequence | MSIFILRAWT GTNAVHRGNV LRGKVRGTQL VRHGWRCREI LGSTQAPRRT LAQNFVRHQA CAISSPSPQI AAPTLPSVPL SDDSVSGDIS IPRSSPPAGQ SMSLSDDAYP PSLSGQKTSQ GGLEREFMDI DDRQGYDDLP AIMMDESLLE TGFEGDGYGG VIRDRLGHQL SKWPTKVPES LIPPYSCRQP SPYQDEPIFC IESTARNMPL LATVLAVFSI FLTAFAGLPQ RLGDMVKAVI QVILELAIAE GQQALRRRVR GGSDSSGLSS PHGATARPPW RREYHRLLQF HHELRVRGYR FRPLDPTFKE EWIVDGATQL PRLNRKNACS FVECRPPLRR FGDFHQPTMT GILWTVFSHI RRASDGRILS HRLFGVFRWF KPSIAYGYRY DEEKTLDIQV FSQHQLSPPF FFPIHAKSLP SIHPVALVSV PQRSSAPLGT KIIVTVPVAR HT
|
| |