Gene CNB05380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB05380 
Symbol 
ID3256035 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand
Start bp1520594 
End bp1521501 
Gene Length908 bp 
Protein Length159 aa 
Translation table 
GC content49% 
IMG OID638255180 
Productsuppressor of initiator codon mutations, putative 
Protein accessionXP_569282 
Protein GI58264252 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01160] translation initiation factor SUI1, eukaryotic 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.00910679 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACTA CAGGTGCGTA TTTGATCGCA GATCTCGCGC ATTGGAACAT TTTCGCCGCT 
TTTCAAAATA TTGTGTTTCC GCAATTGATC AGTGGGAAAA GAGCGATTAT GTGATTGTGG
CGAAACGGAA AGGCAAAGGC TGATAAATTG TCTTGAAGTT ACCCAGAGCA AGGTGGACGC
CACTACCAAG AAGACAAAGG CCCCTGCGGC TACAGCTGGG GTTGAGAACC TCGGTCCTGC
TTTTGGTAAG AAAACAATCT GTTTGTAAGG ACGGACCTAA CGTCCTTAAT AGACCCGTTT
GCTCCCGTTA ACGACTTGAA CGACACTCCC TCTATCGAAA AGGCCGTCGG CTCCAAAAAT
GACAAGATTC ACATCCGTGA GTCGCCACAT CTCTCTCACA TCTTGCAGCT CTAGATATCC
TAACCGCTAC GCAGGTCTCC AACAGCGTAA CGGTCGAAAG ACCCTTACCA CTGTGCAGGG
TATCCCCAGC AAGTACAACC ACTCCAAGAT TCTCAAAGCG ATGAAGAAGG AGTTTGCCTG
CAACGGTACC GTTGTCAAGC CCGAAGTTGA CTCTGGCGAG GAAGACTCTC CTGCCCCCGT
CGCCAAAAAC CACGGTGACG TTTTGCAGCT GCAAGGTGAC CAGAGGGTCG CCGCCAAGCA
GTTCCTCATT GACTCGGGGA TCGTCGCTCA GAAGGAGGCC AAGGACCTTA TCGTTGTGTG
AGTATACTCT GCGATACGAA TTGATTTGTT GAACGAGTTG CTGATTTTTT ATGCGTCTTA
GCCACGGTTA CTAAGCCAGA GCCTTTTAGG GACGAAGCAA CTTGAATCCC CTGCAAGTGG
GAATTTTCAA TATTTGTATC TATCCAATGC TCGTTGCCTG TGTCTTATGA ATTGATCGTC
AGATAAGC
 
Protein sequence
MSTTVTQSKV DATTKKTKAP AATAGVENLG PAFDPFAPVN DLNDTPSIEK AVGSKNDKIH 
IRLQQRNGRK TLTTVQGIPS KYNHSKILKA MKKEFACNGT VVKPEVDSGE EDSPAPVAKN
HGDVLQLQGD QRVAAKQFLI DSGIVAQKEA KDLIVVHGY