Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNB05340 |
Symbol | |
ID | 3255626 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006684 |
Strand | - |
Start bp | 1509144 |
End bp | 1510290 |
Gene Length | 1147 bp |
Protein Length | 124 aa |
Translation table | |
GC content | 49% |
IMG OID | 638255176 |
Product | pre-mRNA splicing factor, putative |
Protein accession | XP_569278 |
Protein GI | 58264244 |
COG category | [K] Transcription |
COG ID | [COG1958] Small nuclear ribonucleoprotein (snRNP) homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.0427818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CACACATCCA CCTCTTTTCC TACCCCCAGA CCCACAGCTA GCTACCCATA ACTCCTCAAC TCTTGAAGTC CGGCAGCAAA AACTAGCAAA CTCACGAACA AAATGGCCAA CCTTGGTGTT CCCGTCAAGC TCCTCCACGA GTCTTTGGGT CATATTATCA CTGTCGAATT GAAAACTGGC GAGGTGGGTA GTCATTTCTT TATCTGTCGA AATCATATGG CTCGCCCTTC TTGTTGCTAA CAATAGCGTC TGTCGTTGCT GTAGATGTAC CGAGGAAAGT TGATGGAGGG TACGTCCCGT TGTCTTACCT CTCCAGATCA CTTGACACCG ATGCTAATCT GCTCATCTTG CCCTGTGTTT TGCCACTCTG CCGCTCCAGC CGAAGACACT CTTAACATTG CTCTCCGTGA AATAACCGTC ACCGCGCGAG ACGGCCGTGT ATCCCAACTC GAGCAAGTGT ACATCCGTGG TAGTATGATC CGATTCATAA TCGTTCCCGA TTTGCTTGCC CAGGCGCCTA TGTACGTGTC TTCATCTCAA TTCCGCTCCT AAAGATTCCC TTTTAGTCTT CCCATTCGCT ATCTCCAGAT AGTACAAGTA GTCGGGATGC TTTTTGTGAA AGGTCTAAGG CTGATTATGG CCCTGCTTGA CAATAGGTTC AAGAGGATCG GTCCTAATGC TATGCGAGGA AGAGGTATTG GTGCTGCCCG AGGACGAGCT ACCATCCAGC GAGGTAAGTC ATCAACCCCT TGTCTTCCCT CTCTATCCCA TAGCAGCATA AGAGGAAGAA TCAGAGAGCT AACCCACGGT GTGTGTTTTG TATTTCTCTT TTTTAGCAAA CGCCCGACGT GGAACGACAA GGACAAACCA AGGTGTCAGG CGTTAAGACC GCTTGCTTTT TTCGGTCTGT TGGGTTTTGG TTTAGTAGGA TGGATGGATG GGTGCAGTGC GGGTTTTTTA TTTGGAGGTT GCCAAGAATA GATCATGCGT ATGGTGGGAT GGGGATGTGC ACGGCGTGGA TTGGAGGCGG GGCAATTTAC TAGACGTCTG GGCTCGGGGT TGAGGCGGTA AGAGCAAAAA AGAGCATGTC TGGCGTCTTC CAGACGGTGT ACCATGGGCA TGAAATTAAG AATATCGTGT TCTTACT
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Protein sequence | MANLGVPVKL LHESLGHIIT VELKTGEMYR GKLMEAEDTL NIALREITVT ARDGRVSQLE QVYIRGSMIR FIIVPDLLAQ APMFKRIGPN AMRGRGIGAA RGRATIQRAN ARRGTTRTNQ GVRR
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