Gene CNB05220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB05220 
Symbol 
ID3255913 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand+ 
Start bp1483520 
End bp1484626 
Gene Length1107 bp 
Protein Length191 aa 
Translation table 
GC content48% 
IMG OID638255165 
Productiron-sulfur cluster assembly-related protein, putative 
Protein accessionXP_569269 
Protein GI58264226 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01999] FeS cluster assembly scaffold IscU 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.423138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTTCTTCAT CGCCTCTCCA ACTCCAACTT ATCGTTCCAT CTTCTCAAAA GCTTTTACAC 
CTTTATTTTT TCTTTTACAA GACACACTAC AAAGCAGAGA CAAGTTTTAA CAAGAAGCAA 
CAAAGATGAT GCGAAACACT ATCCTCCGAT CGACCGCCGC TATGGCTTCC ACCTCTTTCG 
CTCGACCTGC TGTTCGAGCT CGACCTGTAC TCGCCGCTGC TCGAACGATG GGTGCCGGCG 
CTGGTGTTTC CAAGAGGGGA TACCACGCCA AGGTCATTGA CCACTATGAG AATCCTCGTA 
ACGTGAGTAC TTTTCTACTT TGTTAGCAAG TGTTGTGCGT TTCCGAGAGG ATTTCATTGG 
TCGAGTGGAG AGGCGGTAAT ATTATAAGAA ACTGTTAAGA ATGTGAAATA GCTGACTGAT 
GGTATTTGTT GTTGCTGTAG GTTGGCAACC TTCCCAAGGG TGACTTTGAT GTTGGAACTG 
GTCTTGTTGG TGCCCCCGCC TGTGGCGAGT GAGTCAAAAT TTCATTCTAT TTCCATCTTC 
CAGCATCCAT CTATTTACCG TCGTCTCGAT TGTAACTCTT CACGTATACA GCCGCTGACT 
GTTCTCTTCG TACCTAGCGT TATGAAGCTT CAAATCCGAG TAGGCGAAGA CGGTGTCATC 
AGCGAAGTCA AGTTCAAGAC GTTCGGTTGT GGTTCTGCTA TCGCCTCATC GTCATATATG 
ACTGAACGAG TAAAGGGCAT GACCCTTGAT CAGGCGGGTG CGGTGAAGAA CACTGAGATT 
GCCAAGGAGC TCTGTCTTCC TCCTGTAAAG TGTGAGTCAA GCTTCCTGTT TCCCAGTATT 
CTGTCATCCC AAAAAAACGC TGTGTATTTT CGGCGTTTCG GCCGAGCACA TCCTTTGGGT 
TTTTGGAACT GGACTTGGGG ATCATTAAGT TTGTGATGAA GTTTTGCTGA TGGACCTGTC 
TCCCTTATAG TGCACTGCTC TCTCCTTGCG GAAGATGCTA TCAAGTCTGC CATCAAGGAC 
TACCAGACCA AGCGAGCTCA GCGACTTGCA TCTGCCAACG CTACTCTTGC CTCTTCATCG 
TCTCAGCCTC AACAGGCTGC TGCGTAA
 
Protein sequence
MMRNTILRST AAMASTSFAR PAVRARPVLA AARTMGAGAG VSKRGYHAKV IDHYENPRNV 
GNLPKGDFDV GTGLVGAPAC GDVMKLQIRV GEDGVISEVK FKTFGCGSAI ASSSYMTERV 
KGMTLDQAGA VKNTEIAKEL CLPPVKLHCS LLAEDAIKSA IKDYQTKRAQ RLASANATLA 
SSSSQPQQAA A