Gene CNB04820 details

Gene Information

• Locus tag: CNB04820
• ID: 3256082
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006684
• Strand: -
• Start bp: 1373675
• End bp: 1375751
• Gene Length: 2077 bp
• Protein Length: 548 aa
• GC content: 50%
• IMG OID: 638255126
• Product: transcriptional activator, putative
• Protein accession: XP_568972
• Protein GI: 58263124
• COG category: [K] Transcription
• COG ID: [COG5068] Regulator of arginine metabolism and related MADS box-containing transcription factors

Plasmid Coverage information

• Num covering plasmid clones: 51
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAGGA AAAAGATTGA AATTCGCCCG CTCACTGTAC GTTTTCTGCC GAAGAGCAGA 
ACTTGCGCCT AAGAAAAAAA AGGGGCTAAT AGGTCATCCT CAGGACGAGC GTAACAGAAA 
TGTTACCTTT CTCAAGGTTG GTCCACCATT CAAACATGGA CTATCATCAT CCGTAATGCT 
CCAGAGTATA TACTGACCGC GAAATAGAGG AAAGCAGGTT TGATGAAGAA GGCCTGGGAA 
TTATCGGTAC TTTGTGCCGC AGATGTGTCG ATCATCATAT TTTCTGCGGC CGGCAAGGCG 
TTCGAATTCT CAAGCAAGGA GCTGGATAGT GAGATAGACA GGTATCACGA TGTAAGCTAC 
CAGAGGATAT CGTTTCGTTG GGTGAGAAAG GAGGCTGATG AGATAATAGT ATGAAGGGAT 
GATTGAGAGG AGACGGGCGG CAGAGTTTGC AGCAATGGCG CTGGCGGGAG AGGATGATGA 
TGATGATGAA GATGATGATA CTTCAAGGAG AGGCTCTGCG TCCAAAAGCA AGGCGGCGGC 
TGCGGCAAAC GGCAACCCTC CTCCTACTAG GAGTCTCAAA GGGAAGGAAA CGTTCAAGCA 
CCGAACAGTA CGGCCAGGTG AAGACAGGAA GAGGAAAAGA CAGGACAAGA AACAGCGACG 
TAAAAGTGAA CCAAGCGAGA AGAGGAGTTT CATCGATGAG ATCATGAGTG GAGGCGAGTC 
TGATAGTGAA GAAGAAGAGA AGCCCAGACG ACGGTCAAAT GCAGAACATG GGAATGGGAA 
GCGTATGAGT AGTTTGAGGG AAGAGGACGA GTTGGCTGAT GACGTGCCCC ACGTAAGTGT 
GCTCTGATGT ATAACATTCA TAGTTCTGAC TTTATCTTCA GGCATCAAGA CAATCTCTCG 
ATGGATTACA ATACGCACTC AGTATGCACG CCTCTCAACC ATCATTCGAA CGCTTTGCAT 
CTCGTCATCG ATCTCCTCAC GCCGAATTTC TAGCTCCTGC CGCTTCATCC TCCCAAACAC 
CGCTTACAAC TCCCACAATC CATCGTCACC CATCAGACAC CATTCCATAC CCAATGACCA 
ACTCTCTTGC CGCTGCTCCG ATGCAAGCAT CTTTAGGTGT CCCACAGCTC GGTGTTCATC 
CTTCCTATCC TCACAATCCT AACGGTCATC CCGGTTATCT TGGTTACCCC AAGTCTCTTT 
TGGGGATGCA AGCGTCATAT CTACCTCGTC AACCATTTGC TGACGCACCT CAGCCTTCAC 
CATACTACGG TGCTCAGGGC CCAGGGTCTC ATCCCGGTGG GCCTCCTCAA CCCGGCCTTC 
CAACGCAGAT GCCTGGGGGA CAGCCTATTC AATGGGATCA AAATCTCCTC GCTCGTTATG 
CCGAGTTCCA ACTCCAGCAG AATCACCAGC GTCAGCAACG CATACTCTTA GAGAGACAAC 
GACAACAACT GGCAGAGCTG GGTGTACCTC TTGACGAGAA GAATTTGTTG GACGAGATCT 
TTGGAGGGGT AGGAGCCAGC CGGTCGGTGA GTGGAGGTGC AGATCCAAGT GGGGCAGGTC 
CGGGGTCAGC GCTTCTTACC GGACTTGGCA ATACTGCCTC TGAAGGGAGA GAAGAAGGGA 
ATAGCCTAGA GTTCATCTGG CCATTGGGTA ATAATGCCGC TGCTGCTGCG CCAATTAGCG 
ATGAAGATCG AAACGACGTT TCTTCCCGTT CTGTTATTTC TGCTGGCCAT CATCAGGCGG 
CTTATGGATA TGGAAAGCCG CATGTTCAGC AGCAAAAGAC GGGTTGGGGG TTTGATGGGG 
CCGGCTTTGA ATCAATGGAG GAAGTGGCCA GCGGGAGTGG AGTGGGTTTA CCAAGTCCTG 
TTTCAGCAGG TGCTGGCGGG GGCAGGAAGT AGATGAGGCG ACGATGATCG AGAAGGCAAG 
AATCTAATCA TGCGTTTGAT ATGGTATGGC CGTCGCATAC TAGAAAATTT CTTCTAATTC 
ACTGAAAAAA ATAGCTTGCG TCGAAAGAAG CGCTTTTGTA ACTAGTCAGT CTGCCTTTTA 
CCAACAGTTT CTTTTTCACT CGATTCGTTT TCCGTTT 

 

Protein sequence

MGRKKIEIRP LTDERNRNVT FLKRKAGLMK KAWELSVLCA ADVSIIIFSA AGKAFEFSSK 
ELDSEIDRYH DYEGMIERRR AAEFAAMALA GEDDDDDEDD DTSRRGSASK SKAAAAANGN 
PPPTRSLKGK ETFKHRTVRP GEDRKRKRQD KKQRRKSEPS EKRSFIDEIM SGGESDSEEE 
EKPRRRSNAE HGNGKRMSSL REEDELADDV PHASRQSLDG LQYALSMHAS QPSFERFASR 
HRSPHAEFLA PAASSSQTPL TTPTIHRHPS DTIPYPMTNS LAAAPMQASL GVPQLGVHPS 
YPHNPNGHPG YLGYPKSLLG MQASYLPRQP FADAPQPSPY YGAQGPGSHP GGPPQPGLPT 
QMPGGQPIQW DQNLLARYAE FQLQQNHQRQ QRILLERQRQ QLAELGVPLD EKNLLDEIFG 
GVGASRSVSG GADPSGAGPG SALLTGLGNT ASEGREEGNS LEFIWPLGNN AAAAAPISDE 
DRNDVSSRSV ISAGHHQAAY GYGKPHVQQQ KTGWGFDGAG FESMEEVASG SGVGLPSPVS 
AGAGGGRK