Gene CNB04500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB04500 
Symbol 
ID3256102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand
Start bp1294735 
End bp1295445 
Gene Length711 bp 
Protein Length236 aa 
Translation table 
GC content52% 
IMG OID638255093 
Producthypothetical protein 
Protein accessionXP_568945 
Protein GI58263070 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.000303386 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTCAG CAGCCCGTCC ATCCGCTGTC TCGAAAAATA CCTCTTCCCC TCAACCGTCA 
GCCCCGCGAG TCTACACTGC TCGAAAAACG TTCCTCTGGA ACTTGTACAA CCAAGTCTTA
ACGAAATCAT CCCTTGTTCT GGTTTTCGAC CATGCAAACA TATCTGCGGC TGAATGGTCC
AAACTAAGGC GTGCTGTTGG GTCAATCAAG AGGCCGATTG TCCCTTACAA CCCCAGGCTG
CCTAAGGAGG AGCAATTGGA AAGAGCAGAA ATCGAACCAG CGCAGTTGAT GGTCGTACGA
TCCGGTGTGC TCGTCGCGAC ATCCAAAGCT TGCTCGTCCC CCATCACTCC TCATATCACA
GGCCAGCGGG CTGTTCTTAC CTGCTCCACT CTCTCCCCCA CATATCTCAA CAAAATCCTT
ACCGCTCTCT CTAGAACGGT CAAATCTATC AAGCGAGAGA ACTCTGCCAT TCAACCGACT
TTGGAACTTG TGGCGGGTTT AGTGGAGGGC GGGAAGGTGA TGGGTCAGAA GGAGTTGGAG
GAGTTGGGCA AGGTGCCGGA ACTTGATACG TTGCGAGCGC AGTTGGTTGG TCTTTTGGAG
GGACAAGGAA GGAGTCTTGT GGGCGTTTTG AACCAGGCGG CTGGTGGAAG CTTAGTCAGG
ACGTTGCAAG GATTGGAGAA CGATCTGAAG GAGAAAGAAG GATCTGCATG A
 
Protein sequence
MSSAARPSAV SKNTSSPQPS APRVYTARKT FLWNLYNQVL TKSSLVLVFD HANISAAEWS 
KLRRAVGSIK RPIVPYNPRL PKEEQLERAE IEPAQLMVVR SGVLVATSKA CSSPITPHIT
GQRAVLTCST LSPTYLNKIL TALSRTVKSI KRENSAIQPT LELVAGLVEG GKVMGQKELE
ELGKVPELDT LRAQLVGLLE GQGRSLVGVL NQAAGGSLVR TLQGLENDLK EKEGSA