| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB04260 |
|---|
| Symbol | |
|---|
| ID | 3256001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006684 |
|---|
| Strand | - |
|---|
| Start bp | 1242477 |
|---|
| End bp | 1244637 |
|---|
| Gene Length | 2161 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | 638255071 |
|---|
| Product | 5-aminolevulinate synthase, putative |
|---|
| Protein accession | XP_569249 |
|---|
| Protein GI | 58264186 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR01821] 5-aminolevulinic acid synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.271315 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TCTTCTCTTA TCCATTCAAC ACCCTCATCT CCTTGTCTTC AACGCAGCAT AGCACCACCT
CAAGATGCAA GTTACCTCGC TTCTGCGATT TTCCGGCGTT TGCCCCTTTT TGGGCCACTC
CACCCCATCC TCGCTCCGAG CTATGGCAAA CACCGCCAAT AGCAGTGTCT CTGCTCTCAC
CGCGACCGCC ATGACCTGCC CTATGATGGG CCCGAAGCTT GCTTCCATCT CTGCAGCTAG
AACCTACGCC AGTGTTGCCG GTGCCAAGGA GGTTCAAGAG TTGCACCAGG TGAGCTTTTT
TTCTTCAACC CGCGCCCTGT TTACGCGCGG ATGCGCCCGT AACTCAGCTC ATACTCTATT
ATCTTCATTA GAACAAGAAT GTCACTATCG ACTCCACCAC TACTGGTGCG GCTGCCAAGT
GCCCTCACGC CAAGGCTGCC CGTGATGTCG CCGTCGATGC TCATCGCAAG GCTGCCGCCG
CTGGCACTTT CAACTATCAA GGGTTTTACG AAACTGAGTT GGAGAAAAAG CACAAGGACA
AGTGAGTACA TCATTTCCAC AGGTTGCAGG ATTTTTTTCT AATTCTAATT CTCGTTAGGT
CCTACCGTTA CTTCAACAAC ATCAACCGGC TTGCTGCCAA GTTCCCGGTT GCTCACACTG
CAAACACCAA GGACGAGGTG GATGTTTGGT GTGCGAATGA TTATTTGGGT ATGAGTAGGA
ATCCCGTCGT TGTTGGGACT ATGAAGTGAG TACTCTCTTT GACATTACTG GAATATCGTC
CTAACTTCTC ACAGACGTAC TCTTGACCGT TATGGCTCCG GTGCTGGTGG TACAAGGAAC
ATTGCCGGTA ACGGCGCCCT TCATCTCGCC CTTGAAGACG AGATAGCTTC TCTCCACCGA
AAAGAAGCCG CCCTTGTGTT TTCGTCTTGC TACGTCGCCA ATGATGCCTG CCTTGCCACC
ATCGGTGCCA AGCTTCCCGG CTGTGTCATC TTCTCCGACG CAAGCAACCA CGCTTCTATG
ATCCAAGGTA TCCGCCACTC TGGCGCTAAA AAGGTCATCT GGAAGCACAA TGACTTGGCT
GACCTTGAGG CCAAGCTCAA GACTGTACCC AAAGAAGTTC CCAAGATCAT TGCTTTTGAG
AGTGTCTACT CCATGTGCGG TAGTGTCGCT CCCATCGAAG CTATCTGTGA TCTTGCAGAC
AAATACGGCG CCCTCACATT CCTTGATGAA GTGCATGCCA TCGGCATGTA CGGTCCCAAC
GGTGCTGGTG TTGCTGAACA CCTTGACTTT GAGGCTCACC ACGCCACCCG TCACTCCCCT
GAGCCCGTGA AGGGCAGCGT CATGGACCGA ATCGATATCA TTACTGCCAC TCTTGGTAAA
GCCTACGGTG TTGTTGGTGG TTACATTGCC GGTTCTGCCG ACTTTGTCGA TGTCGTTCGG
TCTTACGCCC CTGGCTTCAT CTTCACTACT TCTCTTCCTC CTGCCATCGT CGCCGGTGCT
CAAGCGTCCA TCGCTTACCA GCGAGAGTTC ATGGGAGACC GCCGTCTCCA GCAGCTCAAC
ACCCGTGAAG TCAAGCGTCA ATTTAACCAA CTTGACATCC CTGTCGTGCC CAACCCCTCT
CACATCATCC CTGTACTTGT CGGTGACGCA GCCCTCGCCA AGGAGGCTTC CGACATGCTT
CTCGCCAAGC ACAAGATCTA CGTTCAGTCC ATCAACTATC CCACTGTCCC TGTTGGTGAG
GAGCGCTTGC GTATCACTCC CACTCCCGGT CACACTACCG AGCAGATTGC CCACCTTGTC
TCCTCTATTG ACAACGTTTT CAATACTCTT GGCTTGAAGC GTATTAGGGA GTGGAAGGCC
GCCGGCGGCC GCGCTGGTGT CGGAATGCCC AACGCTTCCG CGATTGAGCC CGTCTGGTCT
GACAAGCAGC TCGGCTTGAC GGATGGTTCC GCCCCTGTTG CTCTTCAGCA AGGTGCTAAG
AGCGTTGTCA GGGATGAAGC CGTCGAGGTC GCTCAGAAGA AGTTGACTCA CCTTCTTGGT
GCCGATGCCG GTCCTGCCTT GAAGGTTGCT TCTCTTTAGT GCAGAGCTGG TTAGTTTGAC
CTTTTAATCT GTTTGTATCT AGGAGTAGCG AGTTTTGCCT TGATGAACTA CTTGCTGGAT
C
|
|---|
| Protein sequence | MQVTSLLRFS GVCPFLGHST PSSLRAMANT ANSSVSALTA TAMTCPMMGP KLASISAART
YASVAGAKEV QELHQNKNVT IDSTTTGAAA KCPHAKAARD VAVDAHRKAA AAGTFNYQGF
YETELEKKHK DKSYRYFNNI NRLAAKFPVA HTANTKDEVD VWCANDYLGM SRNPVVVGTM
KRTLDRYGSG AGGTRNIAGN GALHLALEDE IASLHRKEAA LVFSSCYVAN DACLATIGAK
LPGCVIFSDA SNHASMIQGI RHSGAKKVIW KHNDLADLEA KLKTVPKEVP KIIAFESVYS
MCGSVAPIEA ICDLADKYGA LTFLDEVHAI GMYGPNGAGV AEHLDFEAHH ATRHSPEPVK
GSVMDRIDII TATLGKAYGV VGGYIAGSAD FVDVVRSYAP GFIFTTSLPP AIVAGAQASI
AYQREFMGDR RLQQLNTREV KRQFNQLDIP VVPNPSHIIP VLVGDAALAK EASDMLLAKH
KIYVQSINYP TVPVGEERLR ITPTPGHTTE QIAHLVSSID NVFNTLGLKR IREWKAAGGR
AGVGMPNASA IEPVWSDKQL GLTDGSAPVA LQQGAKSVVR DEAVEVAQKK LTHLLGADAG
PALKVASL
|
|---|
| |