Gene CNB04180 details

Gene Information

• Locus tag: CNB04180
• ID: 3255785
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006684
• Strand: +
• Start bp: 1220920
• End bp: 1222925
• Gene Length: 2006 bp
• Protein Length: 539 aa
• GC content: 49%
• IMG OID: 638255063
• Product: conserved hypothetical protein
• Protein accession: XP_569242
• Protein GI: 58264172
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism; [R] General function prediction only
• COG ID: [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.310726
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAGCATCCCA CTCATGTCAA CATAGCCCAG CGCCAACCTA TCGTATATAC ACTGTCCACC 
GCTTCTCCCC AGCTCGCCCT TCAGCAACAC CACCATGGAC AGAGACACGG AGTTAATCGC 
AGGTCCAAGC CGTCCCGCCG TCTACGAACC GGTATCGGTC CAAGACACTT CATTCGACGC 
TCCTCCCGGT TATTCCCAAA GTGAACGTAC ATACGATGCT GAACCTAGTG GATATCAAAC 
CGGAAATCCA TCTTTTTCAA GAGATCCAAC GTTTGAGCGA AATAGAACGA GTATAGATGG 
GGTTAACCAT CAACATGAAG GACATCGACA TGCGACGTTG GCTATGAAGA AGGCTTTGTG 
GTGGAGAAAT GCCATCGTCA CTGGGATATT CATCTTAACA TGGTCCGTCC TTTCCCAGTA 
CTTTTTATAC CCATGCTGAA CCGCTGCTGG TCCATATAGG TACGCATTTG CGACCCTCTT 
ATCGCTCTAC AACAAGTGGA TGTTCTCACC GCAATACTAC AACTTTCAAT ATCCATTATT 
CGTGACAGCA TGCCATATGG TTGTACAGTT TACTCTGGCA ATGCTGATCA GATTGATTTG 
GGCAGACAAG TTTCGGCCCA AAGAGAGGCC CACGAGGAGA GACTATCTGT GAGTTGCTTG 
GTAGCTGTGT GGAAGCGCGA ACCACAGTTA ATAAGGTTAT AGGACAAAGA TCTTGCCTAC 
AGCGGCATCT ACTGGTGGCG ATATAGGACT GTCAAATCTG AGTTTGAAGA CCATCACCTT 
GAGTCTCTAC AGTGAGTTCA ATTCTCAACC GTTGCTGCCG ACGCTGACCA TTACACTAGC 
CATGTGCAAG TCTTCGACGC TTATTTTCGT CCTCATCTTC GCCTTTGCCT TTCGCCTCGA 
AACCTACTCT CTCCGTCTCA TATCGGTCAT CTCCCTCATC TCCTTTGGTG TCTTCTGCAT 
GGTTTTCAAC ACTACCGCAG TCTCTATCCC CGGTGTCCTC ATGGTCTTTT CTGCTTCCGC 
TCTTGGTGGT TTACGCTGGG CGTTGACCGA GCTGGTGATG CACAAGAAGG CAATGGGGCT 
TTCGAACCCT TTTGCGACCA TTTTTTGGCT AGCGCCGCTA ATGGCACTGG CGCTAGCAGT 
TGTAAGTATG ATTGCGGAAG GGTGGTTTGG GATTCTGAGG AGTGAGTTTT TTGACGGGTG 
GAGGGCGGTA GAGACTGGAG GTGTCATTGT GTTGCCGGGG ACATTGGCTT TCGCGATGGT 
CGCGAGTGAA TACTTGTAAG CCTTGTCCTC AGGCCATACG TGGAAGTAAC TAACAACAAA 
CAGTGTCATC CAGAGGGCTG GTGTTGTTCC GCTTTCGATT GCGGGTATTT TTAAGGAAGT 
GTCAACTATC TCTATCTCGG CTTGGGTATT TGGAGATCAG TTGACGACGT TCAACATCAT 
TGGAGTGGTT ATCACCATCA CTGGTGAGTA CTCTTCCATT TTTTGAGAGT CATCCGCTAA 
CCAGACATAG GTATCGCCTT GTACTCGTTC CACAAGTACC AGAAATCCAT ATCCTCTACC 
GTCGAGCTAG ACGCGGAAGG AAAACCTATT ACCACAGACG ACTCTGTCGA ACCTCTTATG 
GACGCTTTCG ACATTCGACA CTCTTCTGTC GGTAATCGCC AGTCTTATGA GCATGACCCG 
ATGACATTGA CCACCAACAA CGTTCCTCTA TCTTACCTTT CCTCGTCAGC CAATCCTTCT 
TCACACGACG TCCCACTGAC AACAACGGAA GAGAGAGGGA GAGAAGAGGA AGAGGTGAAC 
AAGGCAAAGA ATGACTTTGA AGGGTGGGAT CGGCCGGGAG AATGGAGTGG GGATGAGGAA 
GAGTTGGAAG AAGTTGACGA GGAAGAGGTG GAGCTCAGAA GGCAGGAGAG AGAAGGACAA 
AAGAATAAAC AAGGCAAATG GGCAGAGTGG TTAGACAAGC AGATGTAGAT TAGTTTGTAA 
TCATAAGGTA ATTTCGGGAT TACGGT 

 

Protein sequence

MDRDTELIAG PSRPAVYEPV SVQDTSFDAP PGYSQSERTY DAEPSGYQTG NPSFSRDPTF 
ERNRTSIDGV NHQHEGHRHA TLAMKKALWW RNAIVTGIFI LTWYAFATLL SLYNKWMFSP 
QYYNFQYPLF VTACHMVVQF TLAMLIRLIW ADKFRPKERP TRRDYLTKIL PTAASTGGDI 
GLSNLSLKTI TLSLYTMCKS STLIFVLIFA FAFRLETYSL RLISVISLIS FGVFCMVFNT 
TAVSIPGVLM VFSASALGGL RWALTELVMH KKAMGLSNPF ATIFWLAPLM ALALAVVSMI 
AEGWFGILRS EFFDGWRAVE TGGVIVLPGT LAFAMVASEY FVIQRAGVVP LSIAGIFKEV 
STISISAWVF GDQLTTFNII GVVITITGIA LYSFHKYQKS ISSTVELDAE GKPITTDDSV 
EPLMDAFDIR HSSVGNRQSY EHDPMTLTTN NVPLSYLSSS ANPSSHDVPL TTTEERGREE 
EEVNKAKNDF EGWDRPGEWS GDEEELEEVD EEEVELRRQE REGQKNKQGK WAEWLDKQM