| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB04070 |
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| Symbol | |
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| ID | 3255609 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006684 |
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| Strand | - |
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| Start bp | 1196865 |
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| End bp | 1201195 |
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| Gene Length | 4331 bp |
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| Protein Length | 1281 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | 638255051 |
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| Product | conserved hypothetical protein |
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| Protein accession | XP_569231 |
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| Protein GI | 58264150 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.217491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GGAAACAGCG CGCCGAGAAG AGAAGAAGAG TATAGACATA GCAGACACAG GGACACGAGA
GCAGGCCAGC GGCAGTCGTC CCACACGCCA TACACATAGC AGACCGCTCA GGCAGCATGT
CTCGCGCCCC CTCGCCTTCC ATCCCAGCCA GCCAGTCCGT CTTGCCACTG TGCGAGTCCA
CGTCAACCAC GCCCACGCCC ACGCCCGCTC GTCCCGGCTT GCGCATCGAC GTCGATTCCC
TGCCTTCCTT CCCTGTGAGT GCCAGTGACA AGCACGATGT CGCCATGGCA GTAAGAAACC
TGCGAAGCGC ATCGCCGCCT CCGCCTCCGC CGAAATCCGC GAGCCGTCTA CGCGCAAATA
CCTCTCCGCC AGATTCTGGA GGCGTGGCGC TTGCACCTGC GCCCGGTATA GACGGGTCGG
GTCAAGCTGG TGTCGGAAGC TCAGCGTCGG CCTCGACCTT GGTGTTTAAC GAGGAAGAGA
GGACTCTGAG GATGATCAAG CAGGCGCTAG AGAAATCAGA CGATGACGGA GATACATTAG
ATCTGAGTAG AAAGGATATA GATCGGATAG GAGAAGAGGC GGTTGAAATG TTCAGAAGCG
GCGTTGGCAA AGGTCAAAAG GGTGTATGGC GGTGTGTCCG GTCTTCATGA ATAGAAACGT
GCGCTGACTT ACGACCTGTA GGCTGGCTCT GTCTTACAAC TTTCTGAGGG ACGACTCTAT
GGTAGACTCA TTCTCCAAGC TGAGCAGATT ACGGTACCTC AATCTCAAGG GAAACAAGTT
TACTCGGTTT CCTCATGCAG TATGTTTTCC TCCATGTCTA TCATATGTAT ACTGACCGTC
TGCAGATCAC GCAAATGCCC GCTTTGGAAA TCCTCGATTT CTCAAAAAAC GAACTGTCCT
CGCTTCCCGA ACAGCCCGGA CACTTGGTCA AGCTCAAAGT CCTTTCGTTG ACAAGTAACA
AGATCCACAC ACTCCCTAAT TATCTTGTCG AGTTCGGGGT GTTGAAGGTG TTCAAAGTGG
ACCAGAACCC TGTAGACTGG CCTGTATGTC ATCTCATCCT GTTTGAAAAC TGTTATATAC
CCCCACTGAC ATGCGCAACT AGCCTGCCCA TGTGCTTGGT CCCTTGATTG AATCTGTCCC
AACCAAGTCC AAGACGAGCA GTACCCCTGG AGGCAAGAAA AAGGCAAAGG AGGAGGATCT
GCGGCCTTGG ATTGAGAGTA TGAAGGTCTG GATGGCCCAG CAAACACCTG GTTCCGAGAA
CGCGCCTCGC AGAGGCGAAG AGGAAGCGTA CCTGGCTTCA GAGTGAGTTG AAAATCAATT
TTCGAAGCAG GTTAGCATAC TAAACATAAC TGCAGGGAGG AACCGTCGAG CGCAACGTCC
ATTGAAAATC CCGGAGCGAC AGAATGGCCT GAAGTATCAG AAAGCTCTTC CACGGTCGCT
CCTTCTTCTC AAGCAACCAT CCGTCGCACA CAGCCACTTT ACGGAGATAC CCCTGATTTA
GTGTTCGCCC AGCGAAACAT CTCGACAACT TTTTCTGAAG ACTCTCTGTT ACGCTCGTCC
TCTCCCAGTC ATTTCTCTCC TGCAAACCAC AGTCGCGACG CATCCGTTTC TTCCTTCACC
TCCCCTCCCT CTGCATCCAC AGATGCGTCC TTCCACTCGC ACTCGCGTAA TCCCTCTACC
AACTTTCCTC ATCTCGCTTC CCAACCCGTC CAGGGACATA CTCGCGGCGC GAGCTATACT
CCTGCACAAC GCAACTCTGG GCAGTTGACA GCAAAGAAAT CATTACCAGA CTTGCGTCAA
AGCCACGCAA AGATTATCCG CGAACGCAGA GGCGATGCAG ACGAAGAAGT GGTCACCATG
GTGGCGGCGC CAGATATCGA TCCACGGGAA ATTGGGGTAC GATCACCTCC ACGTTTGGCT
AGTGCTTTAC GACCGAAACG AGCTAGTAGG GTGATGGGAC GGAAGACATC TGTGGATTTG
CTGCCTCGCA AAATGGGAGA AATGACGAGC CACGACATGG CAGATCGGAA CGTTTCTCAT
GACAGTATCC TCGACGAATC TCGCAACTCT TATTTTCGCC GTCTTTCTAC CCTGCCGGCG
TCCTCCATAT CTAAAGCTAT CCCGCCTTTC CTTCTCAAGT TCATCGACTC CATCCGAGGT
ATACTGTTTG CGCTTTCACA ACTGCACAGT TCGCTGAGGC AATATCTCGT TTTTGCTGTC
AACGAACGGG TTTCAAGCGT GTTTGGACGG GTGATGGAAC CTGCTGGGAT GTACATAAAC
AAGCTAATCA ATGCACTCGA TCGATTCGAC TCCATGTCCC GCCGGGGTAC TCCCCCAACG
CAAGCTATAC AAAACCTCTT TGACGCTACG AAAGAAAGCG TTGCCGTCTT TGGTAAAGTG
GCGGCTGTGC TCAAGATGCA GGTTCCCGCT ATGCGAGGGA ATGACGTGAG ATATACTCGA
ACGTTGATGG TGCATGTCTA TGGGGCTATG GCAGAGGTGG CGAGCTCGTG GAAGGCCATG
ACGGGGCTGT TACCCGAGGT AAAGATGTTA TTGCTCATTG ATGCGCCTGG TGTGGTAGGC
GGAATGGGCG GACAGAAGAT TGTGCCAAGC GGGTCATTCA CTGGACGTAC CCCCATTTCA
CCCATCATTG AAAGACGGGA ATCCCATTCA CCTCAATCGT CAACTCTGGA ATCGTCTCCC
CTCAACCTGG AGCGTCAACA ACAACAACAA CAAGCCGAAA TTGATGGTTC ACCTACGGCT
CATGCGGAGA GGCGGGCAGG CGTGCGAGGT CATGGTGTTG GAACAGAAAG GAGACACGCG
GGATCGTATA GCAGTTTAGA TGTGGAAAGA GGTATGATGA TGGGCTCGCC TTTGGCAAAA
GGCATGTCTA TTGGTGTTAG GGAAGACGAG GGACATAGGA GAGGGGAATC GGGGACGATT
CATTTACCGA CGCCCGACGA GGAAGATGAA GAGGATGAGG AAGAGTACAG CAGTATGAGG
CACATGTTGG GCCCTGTGTC GCCGCAGTCT GTGTCTGGTC GGACTTCTCA ACAACGTCAT
AGACCGACTT CATCTTCTGG CTCCAGTCAT GCCCTTTGTC TCCCTCCTAG CTTGCCTCAT
CACCCTTCTC GGCAGCTGTC GGTCGATGTC CGCGCACCAG CATCGGCGGC TGCAACTCTC
TTTGACGAAG ATTTGTTGGA TGTGATCGAG ACGGCCACAG AAGCGGCGTT TGCATGTTGG
CTCAAGTTGT CTGAAGAAAT TGGAGCGTTG TCACCTCAAA TCAGCAGGTC GACACATAGG
AACAACTCTT CAGTCAGCAG CGTGTCAAGT CAGAGCCAGG GTCATCTCGA TTCGGCCCGT
ATGGCTCTAC CGTTCTTTAC GCCTCTTGGT GCCCACAGTC GTCGTCCATC CACCATCTCG
CCTAAATACC ATGCTGAACT CGTACATAAC CTATCTGTCG CCGAACAAAT TACTGCCGCT
TTGCGCGAAT CTCTCCTACG TCTTCGTGCG GACCCCCTTG CTTATAGCCA TACTACGCTT
CCAGACGATG CCCAATCCTT CATAAAGATT GTCGTCAAGG TGTCTGAGCT TGTCAAAGCT
ATGTCGGGGA CACATCCGTT CCCAATAAGT GTCCGACAGG CGGTGGGCAA GTTGACGCAG
GCGACGAGAG AATGTGCAAT CTTAATCCAA GTTAGCTCAT TGCGGCCTGG ACAAGGGACT
CCAGCGCCGA CAGCACCCGT GTCTTCGGGG AGGTCCGTGA TGCCAATCTC GCGCGTGGGC
TCCGCTACAG GAATAGGCAC AGGTTATAGC TCTAGCCACC ACGGACCCGA ATCAAGCACC
GACGATCTAT CTCACCTTCA GCCCCCTTCC TCAGCCGGTC CATCCCACGT ATCGACTCCG
CTTTACACTC CTTCCTCATC CACCACGTCT TTCGAGCATT TCCATCACAT TTCTTCCTCG
ACTGGTGTGA CCACAAATGC CAGTGGCTTG AGGGATCTAC ATTTGCCCAG TAGACTTGGT
CATGCTCCCT TTGGTAGGAA TCGATCTGCG AATGGGTCTG CGCAAATGGC ATTGCCAAGT
ATACAGATGC CGGTGCCGTA TGTGAATGGG GGCGCTGTGG GAAAAGCAAA TCAGCCCAGG
AGTGCACAAG CTAGTCAGGT TGCTTTTTGA AACGTTTGTT TGAATTTGGA CTGAGCGCCT
GGGCGCGCGA AAGTATGTGT GAAGGATAAA GAATCTTTTA TGATAATTAT TCATGTGGTT
CACGAAATAT TATGAGAGCA ATTAATGGTA TTTGTACAGT AGTCTTTATT TCCATTTCAA
ACGGTGTATG C
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| Protein sequence | MSRAPSPSIP ASQSVLPLCE STSTTPTPTP ARPGLRIDVD SLPSFPVSAS DKHDVAMAVR
NLRSASPPPP PPKSASRLRA NTSPPDSGGV ALAPAPGIDG SGQAGVGSSA SASTLVFNEE
ERTLRMIKQA LEKSDDDGDT LDLSRKDIDR IGEEAVEMFR SGVGKGQKGV WRLALSYNFL
RDDSMVDSFS KLSRLRYLNL KGNKFTRFPH AITQMPALEI LDFSKNELSS LPEQPGHLVK
LKVLSLTSNK IHTLPNYLVE FGVLKVFKVD QNPVDWPPAH VLGPLIESVP TKSKTSSTPG
GKKKAKEEDL RPWIESMKVW MAQQTPGSEN APRRGEEEAY LASEEEPSSA TSIENPGATE
WPEVSESSST VAPSSQATIR RTQPLYGDTP DLVFAQRNIS TTFSEDSLLR SSSPSHFSPA
NHSRDASVSS FTSPPSASTD ASFHSHSRNP STNFPHLASQ PVQGHTRGAS YTPAQRNSGQ
LTAKKSLPDL RQSHAKIIRE RRGDADEEVV TMVAAPDIDP REIGVRSPPR LASALRPKRA
SRVMGRKTSV DLLPRKMGEM TSHDMADRNV SHDSILDESR NSYFRRLSTL PASSISKAIP
PFLLKFIDSI RGILFALSQL HSSLRQYLVF AVNERVSSVF GRVMEPAGMY INKLINALDR
FDSMSRRGTP PTQAIQNLFD ATKESVAVFG KVAAVLKMQV PAMRGNDVRY TRTLMVHVYG
AMAEVASSWK AMTGLLPEVK MLLLIDAPGV VGGMGGQKIV PSGSFTGRTP ISPIIERRES
HSPQSSTLES SPLNLERQQQ QQQAEIDGSP TAHAERRAGV RGHGVGTERR HAGSYSSLDV
ERGMMMGSPL AKGMSIGVRE DEGHRRGESG TIHLPTPDEE DEEDEEEYSS MRHMLGPVSP
QSVSGRTSQQ RHRPTSSSGS SHALCLPPSL PHHPSRQLSV DVRAPASAAA TLFDEDLLDV
IETATEAAFA CWLKLSEEIG ALSPQISRST HRNNSSVSSV SSQSQGHLDS ARMALPFFTP
LGAHSRRPST ISPKYHAELV HNLSVAEQIT AALRESLLRL RADPLAYSHT TLPDDAQSFI
KIVVKVSELV KAMSGTHPFP ISVRQAVGKL TQATRECAIL IQVSSLRPGQ GTPAPTAPVS
SGRSVMPISR VGSATGIGTG YSSSHHGPES STDDLSHLQP PSSAGPSHVS TPLYTPSSST
TSFEHFHHIS SSTGVTTNAS GLRDLHLPSR LGHAPFGRNR SANGSAQMAL PSIQMPVPYV
NGGAVGKANQ PRSAQASQVA F
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