Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNB03950 |
Symbol | |
ID | 3255574 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006684 |
Strand | - |
Start bp | 1162203 |
End bp | 1164606 |
Gene Length | 2404 bp |
Protein Length | 711 aa |
Translation table | |
GC content | 49% |
IMG OID | 638255040 |
Product | conserved hypothetical protein |
Protein accession | XP_569221 |
Protein GI | 58264130 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CTCCTGTCTA CCATCTACTA TCCTTCAAGT AATTCGTCTA CTGCCTGTCT ATCTACACCT TTCGACTCAA CTCATCAAAC TATTACATAC TCATGTCTCT GCTTACCCCT AGCAGGCCTC AAGACTCTGA GCGTACCTCA GTCGTTCTCT CCTCTGTTAC GTGCTCAACA TGTGCAGCAC ACATTGCTTT TTCGTCTCTT GGCGACCATG TTTGTGAGAG CCTTCCGGTT CCAGGAGCTC CTTCTCGTCC CGCCCAATTA TCCACCCTTC AATCATCTTC ATCACAGTCG CAATATAGAC CGTCGAGGCA GGGACCACCG CCAGTTTCTA TACGACCCCC ATTCGCTGGC CCTTCTAGCG CACATCCTTC GCCTACAGAA CTTGCGCCTC CCCGTCGACC GTCATCCCAC AGTCTTACCC CGCCTAGCCG CTCCCCAAAT AATTACACAT TAGGCTTTTC TCCACAGCTG AAAACAAATT CTCCTACCAA CCCCTTCTTT CCTAACTCCG CGGGATCGTA CAGTTCGAGT GCGTCGATGG AAAGCATGCA AATGCCAGAT ACTACTAGTG GAGGGGAGTC TGGGATGGCA GGTGTAGGAA GAAGAGCTTT TGCCGCGGCT GCTTGGGGCG TACGTGCAGG CGTTGCGTTA GCCGCCTCTG CCAGGCAGCA AGCAGCGCTT CAACAAGCAG CTGCCTCTTC TCAACCGCCT TCTCAGCCTG CCTCCTTGCA GAAGCCACCA CAGAATCGAC CAGAGTTACA CCACTCGCAC ACCGCTCCTC TTCAACCCTC TCCTCCAACT CGTTCTCTCA CCCCAAATTC GTCTCCTCAA AGATCACAAT CTGCGATGAG TCAGCGTTCT GCCTCTGACA CCCAGTCTAT TCGTAAACAA TCTACATCTT CTACATCCAG TAGCAGAATG GGAGATAGTC TAGCAGAAAT GCTGACCGGC TCCGTTAAGC CCAGCACTAA GCGGAATTTC TTCGAAAAGA TCAAGGAGCT AGACCGAAGC AACAGTCTGA TGAGCCGTAG TACAAACAGC ACGGCCAATT CGGGTGACAG AAAATTGGTG TCTAGCCCCA TTGGTACGAC ATTTGAATTG GATGATGATT ATGAAGATCA GCCGTCGGCT CTACCTTGGG CGTCTCCCGA AACGGACCAG ATGTCCCGCT TACATATCGA TGCCAAAGTT TCCCCTGCTG TCTCGCGGGC GCATCAGCGA AATCCTACTG CCAGCAGCGA AATTTCGACC AACTCCTCCA TGTCTTCAAA ATCCGGGAGA TATGGAGGCA ACAGCGGTCC CGAAAGCGAG GAAGTCGTCA CTCCCAGCCA AAGTTTTGAG GGCATGACAG ACCGAGTCGA TGGAACTTTC AAAATAGATA TCTTGCAGCA GATTGAAGAG GATGAAAATG AGGGAAGAGA AGTGTTTGGC TCATCTTTGG AGAGGAAACA CGTCGAAGAA AAGGACCGAG AAAACCGCCT GCCCCTTTCG GACTCGGCGT CTATGCCCAC TTCCCGTATA CTTGCCATTG CTGAACAAAG TATCCCTGCC AATAATTCTT CTCAAAACTT TACACATCGC CGATTATCCA GCGAGAAGTC CTCCAACTAC TCCCAACATT CAGCGAGTGC CATTGCTTCT GTGCGTCGTA AGAAAACTTG TCAAAAATGT GGCACCGTGG TTGGTGGACC TAAACGATTT GTTGAGCGCG ATGGTGTGGT CCTTTGCGAG CAAGATTGGA AAAAGCTCTA TCTGCCTTCT TGCCGAAAGT GTAAACTTCC TATCGAGAAG TCTGCAGTAT CTAGTTCAGA CGGTCAATTG AAAGGCAAAT GGCATAGAGC GTGCTTCACC TGCACAAAGT GTGACAGGCC ATTTGAAGGC GATGACTTCT ACGTGTTGGG AGGAAAACCT TGGTGTCAAT ACCATTACCA TGAGGAAAAG TGAGTACTCG AATTGCCTGC TATAGATGAT GTGATTCTGA CAAATGGCAG TGGTACTTTT TGCTCGTTAC ATTCATGCCG ACAACCAATC GAGGGTGCTT GTATTGTTTT GGCGGGACGT AGCCCCCAGC GGTATCATCC TGGACACTTC AAATGCGACC ATCGAGGTGG TGCATCTGGT GCGCAAACGT GTCGAGAGTC GATGGATGAA TATTATGAAG TTGACGGGAA CCGTTATTGT GAAAGACACG TAGGCGAGGC TGTACGCCAG GGGGGAAGAA ACGGTGCTAT AAAAGCTGAG AAGAGGTGGA CCAGATTGAT CGACCTGCCT GCTGCATAGA TCCAAGGCTG CGTAGGAACG TTGTTGAAAT GGTTGTATTA CGGATTATCA ATCCTTATGT CTTTCTACTT CTATATTTGG GATTTTTTAG ACTTCCTATT TACACTTCTA CAATATATTG ATTC
|
Protein sequence | MSLLTPSRPQ DSERTSVVLS SVTCSTCAAH IAFSSLGDHV CESLPVPGAP SRPAQLSTLQ SSSSQSQYRP SRQGPPPVSI RPPFAGPSSA HPSPTELAPP RRPSSHSLTP PSRSPNNYTL GFSPQLKTNS PTNPFFPNSA GSYSSSASME SMQMPDTTSG GESGMAGVGR RAFAAAAWGV RAGVALAASA RQQAALQQAA ASSQPPSQPA SLQKPPQNRP ELHHSHTAPL QPSPPTRSLT PNSSPQRSQS AMSQRSASDT QSIRKQSTSS TSSSRMGDSL AEMLTGSVKP STKRNFFEKI KELDRSNSLM SRSTNSTANS GDRKLVSSPI GTTFELDDDY EDQPSALPWA SPETDQMSRL HIDAKVSPAV SRAHQRNPTA SSEISTNSSM SSKSGRYGGN SGPESEEVVT PSQSFEGMTD RVDGTFKIDI LQQIEEDENE GREVFGSSLE RKHVEEKDRE NRLPLSDSAS MPTSRILAIA EQSIPANNSS QNFTHRRLSS EKSSNYSQHS ASAIASVRRK KTCQKCGTVV GGPKRFVERD GVVLCEQDWK KLYLPSCRKC KLPIEKSAVS SSDGQLKGKW HRACFTCTKC DRPFEGDDFY VLGGKPWCQY HYHEENGTFC SLHSCRQPIE GACIVLAGRS PQRYHPGHFK CDHRGGASGA QTCRESMDEY YEVDGNRYCE RHVGEAVRQG GRNGAIKAEK RWTRLIDLPA A
|
| |