Gene CNB03720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB03720 
Symbol 
ID3255922 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand
Start bp1103321 
End bp1104973 
Gene Length1653 bp 
Protein Length375 aa 
Translation table 
GC content49% 
IMG OID638255019 
Productexpressed protein 
Protein accessionXP_569205 
Protein GI58264098 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2706] 3-carboxymuconate cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.385161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTTCTACTA TCTACAGTCG ACTATTATAC TCCTTCTTTG TAGAAAGATT ATTATTGTGC 
AGAGCGCAAA CAACGAATAA TAAAAAACCG CAGGTACTAC TTCCAACAGC AGTGCAACAG
TCAGTCGGAC CCATTGTCTT AGAATAATGT CCAGCTACAC CCTTTTGGTT GGCGGTTACA
GGCCTAACTA CTCTCTCATC TCCTTTGACC CTTCTTCCGC TCAATTGAAG GTCATTTCCG
ACTCTCCAGC TCCAGAAAAT GCCTCTTGGG TTGAGCCAGC GAGCTTGTCT GAAGAGAATG
ATGGATCAAG GATCTTCTAT TCTCTGTCCG AAAGCAAGGG CAAGGCTGTG AGCTTGAAAG
TCGAAGGAGA GAAAGTGACA GTGGTTAGCG AACGAGATAC TCATGGAGGC TCTTGTCATG
GTAAGGATGA TAAGCCGTGC AATGAAGTGA GTTGATTTTG GTGGACAGTT CACGTTATGA
AGGACAGGTC AGGTATTGCC GTTGCCAACG TAAGTGTTTG GGGGTTATGC TACATATAGG
GAGTCATACT GACCTGTGCT CAAGTATCTA GGAGGTTCTA TCATATTCTT CCCCATCACC
TCCGACTCCA CTCTCTCAAG CTCGTCGGCA TCTCCTCTTC TCAAGTTTTC TCTAGTTTAT
GAAGAGCAGC AGCAGATTGC TCCCAACCCC GAGCGTCAGG ACGCCGCTCA CTGTCATCAG
ATTATCGAGG GGGATGAGGG GACTCTATAT GTTCCAGATC TAGGCAATGA CCGGGTCTGG
GTAGTATGGA GAGAGGGGGA GAGTGGGCTG AGTATCAAGG GCTGGTGCCA AGCGCCTCCG
GGCTCTGGCC CTCGCCATGC CTGTATTTCA AACGATGGTG AGTGACGTCC TGCAATTAGT
ACTCTTACTC ACCAATCTCG CGTGTGTTAC CTTTCAGGCA AACATCTTTA CGTGCTCACG
GAACTGTCCA ACAGCCTCAT AACATTCCCC CTCTCCGACC CAACTTATCC TATTATCCCT
CGTCCTGACT CTCAGCTCAG TGTGATTCCC CCGTCCGTTC CCAAAAAGTA TCACAAGTAC
ATGAATGCCG CCGAGCTGGT TGCCCACCCG GTACATCCAG TCTTGTATGC CTCCAACCGC
CTTGAAATGG ACCTTTCGGA ATCCACCAAG GGGGAATTCA AACCTTCAGT GACAGGCGAT
GCGGTGGCTA TAGCGACTCT TACCTCCGAT GGCAAGCTTG GTAGTGTTCA ACATGTGAGG
ACTGGGTGCA ATGCCGTCCG TGCGATGCAG CTCAGCCCGG ATGGCAAATT TGTTGCTCTT
GCCGGGCAAA ACGGAGGTGG CATGGAAATC TGGAATGTCG GTGACGATGG CAAGGCATGG
ACTCTGGTTT GTAGAAATGA GAAGCTCGAG GGTATAACGG ACGTCGCATG GTTGTAAACG
CTTGACCTAT TTGTAAGTGT ATGATCTTTC AATTGATGCT ATCGTCTTTC GACGATGAGC
GATCCGGCCA TTTGCTTTGG TGACTGAGCA TCACTAACGA GTTTTTCGTA CTGCAGATAG
ATCCCTGAGT AAGATTCACT GAAGTAGCAA TGAGAGACTG TACAGGATGC AGATATTGTA
ACATTTCAAC TGCCGCAATC TACTGTCAGG AGA
 
Protein sequence
MSSYTLLVGG YRPNYSLISF DPSSAQLKVI SDSPAPENAS WVEPASLSEE NDGSRIFYSL 
SESKGKAVSL KVEGEKVTVV SERDTHGGSC HVHVMKDRSG IAVANYLGGS IIFFPITSDS
TLSSSSASPL LKFSLVYEEQ QQIAPNPERQ DAAHCHQIIE GDEGTLYVPD LGNDRVWVVW
REGESGLSIK GWCQAPPGSG PRHACISNDG KHLYVLTELS NSLITFPLSD PTYPIIPRPD
SQLSVIPPSV PKKYHKYMNA AELVAHPVHP VLYASNRLEM DLSESTKGEF KPSVTGDAVA
IATLTSDGKL GSVQHVRTGC NAVRAMQLSP DGKFVALAGQ NGGGMEIWNV GDDGKAWTLV
CRNEKLEGIT DVAWL