Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNB03720 |
Symbol | |
ID | 3255922 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006684 |
Strand | - |
Start bp | 1103321 |
End bp | 1104973 |
Gene Length | 1653 bp |
Protein Length | 375 aa |
Translation table | |
GC content | 49% |
IMG OID | 638255019 |
Product | expressed protein |
Protein accession | XP_569205 |
Protein GI | 58264098 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2706] 3-carboxymuconate cyclase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.385161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTTCTACTA TCTACAGTCG ACTATTATAC TCCTTCTTTG TAGAAAGATT ATTATTGTGC AGAGCGCAAA CAACGAATAA TAAAAAACCG CAGGTACTAC TTCCAACAGC AGTGCAACAG TCAGTCGGAC CCATTGTCTT AGAATAATGT CCAGCTACAC CCTTTTGGTT GGCGGTTACA GGCCTAACTA CTCTCTCATC TCCTTTGACC CTTCTTCCGC TCAATTGAAG GTCATTTCCG ACTCTCCAGC TCCAGAAAAT GCCTCTTGGG TTGAGCCAGC GAGCTTGTCT GAAGAGAATG ATGGATCAAG GATCTTCTAT TCTCTGTCCG AAAGCAAGGG CAAGGCTGTG AGCTTGAAAG TCGAAGGAGA GAAAGTGACA GTGGTTAGCG AACGAGATAC TCATGGAGGC TCTTGTCATG GTAAGGATGA TAAGCCGTGC AATGAAGTGA GTTGATTTTG GTGGACAGTT CACGTTATGA AGGACAGGTC AGGTATTGCC GTTGCCAACG TAAGTGTTTG GGGGTTATGC TACATATAGG GAGTCATACT GACCTGTGCT CAAGTATCTA GGAGGTTCTA TCATATTCTT CCCCATCACC TCCGACTCCA CTCTCTCAAG CTCGTCGGCA TCTCCTCTTC TCAAGTTTTC TCTAGTTTAT GAAGAGCAGC AGCAGATTGC TCCCAACCCC GAGCGTCAGG ACGCCGCTCA CTGTCATCAG ATTATCGAGG GGGATGAGGG GACTCTATAT GTTCCAGATC TAGGCAATGA CCGGGTCTGG GTAGTATGGA GAGAGGGGGA GAGTGGGCTG AGTATCAAGG GCTGGTGCCA AGCGCCTCCG GGCTCTGGCC CTCGCCATGC CTGTATTTCA AACGATGGTG AGTGACGTCC TGCAATTAGT ACTCTTACTC ACCAATCTCG CGTGTGTTAC CTTTCAGGCA AACATCTTTA CGTGCTCACG GAACTGTCCA ACAGCCTCAT AACATTCCCC CTCTCCGACC CAACTTATCC TATTATCCCT CGTCCTGACT CTCAGCTCAG TGTGATTCCC CCGTCCGTTC CCAAAAAGTA TCACAAGTAC ATGAATGCCG CCGAGCTGGT TGCCCACCCG GTACATCCAG TCTTGTATGC CTCCAACCGC CTTGAAATGG ACCTTTCGGA ATCCACCAAG GGGGAATTCA AACCTTCAGT GACAGGCGAT GCGGTGGCTA TAGCGACTCT TACCTCCGAT GGCAAGCTTG GTAGTGTTCA ACATGTGAGG ACTGGGTGCA ATGCCGTCCG TGCGATGCAG CTCAGCCCGG ATGGCAAATT TGTTGCTCTT GCCGGGCAAA ACGGAGGTGG CATGGAAATC TGGAATGTCG GTGACGATGG CAAGGCATGG ACTCTGGTTT GTAGAAATGA GAAGCTCGAG GGTATAACGG ACGTCGCATG GTTGTAAACG CTTGACCTAT TTGTAAGTGT ATGATCTTTC AATTGATGCT ATCGTCTTTC GACGATGAGC GATCCGGCCA TTTGCTTTGG TGACTGAGCA TCACTAACGA GTTTTTCGTA CTGCAGATAG ATCCCTGAGT AAGATTCACT GAAGTAGCAA TGAGAGACTG TACAGGATGC AGATATTGTA ACATTTCAAC TGCCGCAATC TACTGTCAGG AGA
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Protein sequence | MSSYTLLVGG YRPNYSLISF DPSSAQLKVI SDSPAPENAS WVEPASLSEE NDGSRIFYSL SESKGKAVSL KVEGEKVTVV SERDTHGGSC HVHVMKDRSG IAVANYLGGS IIFFPITSDS TLSSSSASPL LKFSLVYEEQ QQIAPNPERQ DAAHCHQIIE GDEGTLYVPD LGNDRVWVVW REGESGLSIK GWCQAPPGSG PRHACISNDG KHLYVLTELS NSLITFPLSD PTYPIIPRPD SQLSVIPPSV PKKYHKYMNA AELVAHPVHP VLYASNRLEM DLSESTKGEF KPSVTGDAVA IATLTSDGKL GSVQHVRTGC NAVRAMQLSP DGKFVALAGQ NGGGMEIWNV GDDGKAWTLV CRNEKLEGIT DVAWL
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