Gene CNB03390 details

Gene Information

• Locus tag: CNB03390
• ID: 3255864
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006684
• Strand: +
• Start bp: 1019609
• End bp: 1023157
• Gene Length: 3549 bp
• Protein Length: 938 aa
• GC content: 48%
• IMG OID: 638254984
• Product: nucleus protein, putative
• Protein accession: XP_568913
• Protein GI: 58263006

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.175447
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGAAAAAAAA CTCATTCCCC CTCTTGCTTG CTTTCAACAG ACCTCACAGT CGTCCCAGCC 
CTTTCATTGA GACAGGTTTC TCCCACGCAG CGATAAAATA CAAGAAAGGG CCGCAACGCA 
CAGCTTTTTG CCTCTCTTTA GACCTCGACC GAGGCTGACT GAGCGCGTCG GCATCGCGCA 
TCCGGCCAAA ACATCAACTA GGGGAACGTC TCCTCACAAT GTTCGTCGTC ACTTTTGTCC 
CATACCTTGC TATACTCTTT TAGCTAACTC AATCTCTTTG ACTACCATAA ATTGTCTGTA 
CAGTAAGACG CCATATACTG CTTGCGCTAA AAAGGACGTC TACTGCAGTC TCAAAGGAGG 
ATAACCCACG GCAAACAGTA ATAAAAAGCG TGGAATATTG TGCCACACCA AGGTAAAATG 
TCCGATGTCG ACGGAAAAAG GCGTAAGATA CAGGTACATG GTCGTCTTCT ATCGTGAGAA 
GGTCGGATAA AGTAATGACA AGTCTTCTAG CGGGCCTGTG ATGTATGCAG GCGAAAAAAA 
ATTAAGTGCG AAGGGCCCAT GAATAGCCTG AGTGATGCCA GTCAGTGTAA TATCGTGCTA 
TATCATTGAA AATGCCTGAC TGAAGACGGT TTCCTGTAGA ATGTGCTCAC TGTGAAGAAT 
ACGGCATGGA TTGCACGTAC GTCGAGGCGG CAAAGAGAAG GGGGCCTCCA AAAGGGTATG 
TCGTGTATTA ACTCTACTGA GCATACCATC TCATGTGTAT TATTAGTTAC GTTGAGACAC 
TGGAGCAAAG AGCTGGACGA TTAGAGAGGA TGCTGCAACA GGTAATTGCC GTTCACCGTT 
TGGTGTTTTA ATATCTGCTG ATATTACAAG ATTTATCCTG GTGTCGATTT AAACGAATAT 
GTGGGGCCAA AGCCGGACAG GGAAGACTTT GATATCAGTG CGTATCATGG CACTCTTCGT 
TCCCTCAATA TCCCACCATA TCCAGCCTTA AAGCCTCTAC ATTCCGAACA TCTTGTCACT 
CCACATACAT CTCGTTCTAC TTCGGTTGGC ACATCTCCGG CGGCCCCAGC ACCTTCACCC 
TCAATGCAAG CGCTGGGTCC CTCTCCATGG CGAATGTATG AAAGAGATCC TGCGAAACCT 
GCTGAAAATG AGTCCGACGT GGAAGAAGAG GCGGCTGCGC AGCTGTCTAT AGCTACATCA 
ATGAGTCAGT TAGACATTCG CGACAGCCAT TGGCGTTGGC ATGGTCGGGC GTCAGGGGCT 
TTCCTTATGC GACAGTTTGA AGATCTCAAG TCAGCGACAG GTAATACCTC AAGTATCATA 
CAAGACATCA ATAACCACAA ACGACAACAA TTCTGGCATG TCCCAGAATG GGAACTTGTC 
ATTGCGAACG AAGGCTTACG CCCTCTTGAC TACTCTATCT GGCCAGAAAA AGGCCTAGAT 
CAACGACTTA TCGACGCATA TTTTGATAAC GTCAATCTTC ACCTGCCCTT ACTTAACCGT 
AAATTCTTTC AACGACAATA CGATTCTGGT ATGTGGCGGA ACAATCCCGG TTTCTCGAGA 
GTCTGTTTGC TGGTTTTCGC CAATGGATCG CGGTTCGTGG ATGATCCACG GGTCTACTGG 
CCTGCAAATT TGTCGATGAC AGAGGAAGGG AGTGAACGCC TTGCAACGGA CAAAGACGGT 
ACGCTCCGTT ACTCGGCTGG CTGGAAATAC CTCCGCAGCC TTCTTCGCAT GGGAAGAAGT 
ATCATGCAGG GACCAAATCT GTATGAATTT CAAACCCAGG TCCTCATTTG TCAATTCTTG 
CAGGGGAGTG CTGTCCCACA TCTTATGTGG ATTTTGTCAG GCTTCGGTCT CCGCTCGGCC 
CAAGAACTAG GCATTCATGT TCGGGCCACT TTACTCCATG CCGATCCTAC CGAGCGAGCT 
CTTTACAATC GCGCGTTTTG GTGCTTGTAC CACATTGACC GGTATAACTG CGCTGCGATT 
GGCCGATCAG TCGCTATACA GGATTCTGAC TTCAATGCGG ATTATCCAAT TGAGGTCGAT 
GATGAGTACT GGGACACTGG AGATACTGAG CGCGACTTCA AGCAGCCAGA AGGGAAAATC 
TCATTAATAA CGTCCTTTGT CCAAACACTC AAACTCGATC ACATCATGGG CGCAATATTG 
CAGAACGTGT ACGCAATCAA CAAGCTTCCA GAGCAGCGAG CGGACATTGC TGCTCAGCGT 
GCCATCGTTG TTGAGTTAGA CTCTGCCCTC AATTCTTGGG CTGACAACGT TCCACACGAG 
CTTCGCTGGG ACCCTAGTTG CTCCGACTAT CAATTGTTCC GCCAGTCAGC TGTGCTATAT 
ATCTATTATT ACTACTGCCA AATCCTAATC CACCGTCCCT TCATTCCTGG CCCGCGAAAT 
CAACATGCCG CCGATCTACC GTCCCTTGCA GTTTGTGTCA ATGCCGCTCG GTCAATCTGC 
AACATCACCT ATGCGGCACT CAAAAGAGGT AGACAGGAGG GGTGCTTACC CGGACGAGCC 
CTAAACGTCT CGTTCATGCT GCCAACATGG ATCGCTGCCA TTATCCTTGT GATCAACATC 
TACTCTGGGA GACAAACAGC GGCCGAACGA GAAAAGGCTT TGATCGACAT TGGGCGATGT 
GTATCGGCAA GTAAGGAGCT GGAATTGATA TGGAGGCAAA GCGGTAAATA CACCGACTTT 
TTGTTGCAAT TGGCAAGAGA GGGCGGAATG CCCAACGCCG ACAAGGTGCC TATGGTCGAG 
AAAAGATTGC GTGAAAACAA TCCGCAACTG TCAGAGCGCT CACGGCGTCC AGAGTCAGTG 
CAAGGGTCTA CCGCCGGAAC ACCTGATCAT AACTCACCTT CAACCAGTTA CCCATACAGT 
CATGGTCGAT CAAATGGGCA GAATTCCAGG TCGTCCGGCG AGCATTCCCG CCAGCCATCT 
GCGGCACCTG TAACAGGGTT TGATCTGCGC AATTTCACTT GTCCAGAAAC ATATGGTGAT 
ACTTCAGCCA CACCTCAATT TCCCTATTCT CGTGATGATC TCCCGTTTAC GCATATGCCC 
TCTCCCTCGT CATCCCAAAC TGGCTTTCAA AACATGTTTC AACCATCCTC GCAATCTTCA 
CAATATCCTT CCAATACTAG GAATGTGCCT CCACACTTTA CACCTTCCTC CCAAGCGCAT 
ACGCAGTACA ATCTCCAAAC TCCTAATAAT GAACATCCTT TACCGTCGCA GAATGATGGC 
GAGCTAGCGT CTTCCAATAT CTATGATTCG TTGATTGACA TGACAAGCTT TGAGTCACAA 
CTGCTTGACA TGAGTACCAC AGCTTTCGGG GGACCCGAAA ACACGTCAAA TGGCGATTGG 
TGGTCTCGAT TATTTAACGA CTACATGTGG GTAATAGCAT ATTATGGCAT TCGAAAGACA 
CTTGTAAATC CCAAGCTGAC TGCTTTATTA ATCCCAGGGG TCCTGATCTT CACACCAACA 
TGCCTCCCGC ATGTGGTCGT TCGTCGAATT CCGGAGTTTG ACAGTTATCG TAAAAGGTTG 
GCCGAAATA 

 

Protein sequence

MSDVDGKRRK IQRACDVCRR KKIKCEGPMN SLSDAKCAHC EEYGMDCTYV EAAKRRGPPK 
GYVETLEQRA GRLERMLQQI YPGVDLNEYV GPKPDREDFD ISAYHGTLRS LNIPPYPALK 
PLHSEHLVTP HTSRSTSVGT SPAAPAPSPS MQALGPSPWR MYERDPAKPA ENESDVEEEA 
AAQLSIATSM SQLDIRDSHW RWHGRASGAF LMRQFEDLKS ATGNTSSIIQ DINNHKRQQF 
WHVPEWELVI ANEGLRPLDY SIWPEKGLDQ RLIDAYFDNV NLHLPLLNRK FFQRQYDSGM 
WRNNPGFSRV CLLVFANGSR FVDDPRVYWP ANLSMTEEGS ERLATDKDGT LRYSAGWKYL 
RSLLRMGRSI MQGPNLYEFQ TQVLICQFLQ GSAVPHLMWI LSGFGLRSAQ ELGIHVRATL 
LHADPTERAL YNRAFWCLYH IDRYNCAAIG RSVAIQDSDF NADYPIEVDD EYWDTGDTER 
DFKQPEGKIS LITSFVQTLK LDHIMGAILQ NVYAINKLPE QRADIAAQRA IVVELDSALN 
SWADNVPHEL RWDPSCSDYQ LFRQSAVLYI YYYYCQILIH RPFIPGPRNQ HAADLPSLAV 
CVNAARSICN ITYAALKRGR QEGCLPGRAL NVSFMLPTWI AAIILVINIY SGRQTAAERE 
KALIDIGRCV SASKELELIW RQSGKYTDFL LQLAREGGMP NADKVPMVEK RLRENNPQLS 
ERSRRPESVQ GSTAGTPDHN SPSTSYPYSH GRSNGQNSRS SGEHSRQPSA APVTGFDLRN 
FTCPETYGDT SATPQFPYSR DDLPFTHMPS PSSSQTGFQN MFQPSSQSSQ YPSNTRNVPP 
HFTPSSQAHT QYNLQTPNNE HPLPSQNDGE LASSNIYDSL IDMTSFESQL LDMSTTAFGG 
PENTSNGDWW SRLFNDYMGP DLHTNMPPAC GRSSNSGV