Gene CNB03350 details

Gene Information

• Locus tag: CNB03350
• ID: 3255896
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006684
• Strand: -
• Start bp: 1008047
• End bp: 1010110
• Gene Length: 2064 bp
• Protein Length: 585 aa
• GC content: 50%
• IMG OID: 638254979
• Product: multidrug resistance protein fnx1, putative
• Protein accession: XP_568911
• Protein GI: 58263002
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2814] Arabinose efflux permease

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTACTCCCTG CCCATGAGCT CCACAGATGG CCCGGCGGCC GGCCCAGCGA CAGAGCGAAC 
CCAGCTCCTG TCCACCATCT CCACACACCA CAATATTGCT GGCCTTACTC CCTCCAAATT 
CCGCCTTGTA TGCGCCTCTC TGTGGTGCGC AACATTCCTA GTCGCTTTTG ACTCTACCCT 
GGTCTCCACC CTTCTCTCAG ACATTGGCTC CGCCTTCAAC GCCTCTACCC AAGTATCATG 
GCTTGGTACC GCCTATCTCT TATCAGTATG TTGTTTCACA CCCATATACG GCCGGCTGTC 
GGATTTGATC GGTAGACGAA ATGCCCATCT TACGGGCCTC ACTCTCTTCA CTTTAGGCAC 
ATTTGGGTGT GCCATTGCAC CTTCCATGCC TTTCCTCATC GTTGCTCGTT TTTTGGCTGG 
CGCCGGTGGA GGAGGTGTCG CGAGTGTATC GGCAATCTTG ATGACAGACC TTGTTGATCT 
TCGTCATCGT GGCCTGTTCC AAGGCTGGGC CAACGTCACG TACGGTGTTG GTGCCGGTCT 
CGGTGGACCT GTTGGTGGAT GGATTAGTGA CAACTTTGGT TGGAGACTCG CTTTCCACAT 
CCAGGTGCCC TTATTAATTC TCAACGCCAT TCTCATCTAC ACCTTTGTTA TTGTTCCACA 
GCAAGAACCT CTAGCTCCGA CCCCATCCAC TTCAAGCAGT CGCTCAGGGA TTCTAGACAC 
TCTCCCCACT GCCAAACCGG CCAACCGCCC TCAGATATGG AAGACAAAGC TTGCCAGGAT 
CGACTATCTT GGATCCTTTA CCTTGGCTTT GGCCGTCTCA TCGCTGCTGC TTTCAATGTC 
TATCAAGACC TCTGCTACCA AACCCGACGG ATCGGATTAT GCCTTTTCAG ACCCAGTCAT 
TTGGGGTTTG TTTGTCTGCT CCGCCCTGTT TGCCATTGCC TTTCTCCTGG TCGAATCTTG 
CTACTCTCCA GAGCCCATCC TGCCTCTTAA ACTCCTAAAA CGTCGTACTC CGGCAGCCGT 
CGCCCTCTCT TCCTTCACCA TGGTTACTGT TCAGTTCTCT GTTCTTTACA ACATCCCCCT 
CTTCTTCACT ATAGTCCAGC AACGTTCATC TTCTTCATCC GGCGCCCATC TCCTCCCCAA 
CTCCATTCTT ATCGGTGCTG GCTCCTTGTT TGTCGGTTGG ATCATGCGCC GTACTGGGAG 
ATACTGGTGG CTGGGCGTTG AGTGTGCGGT CTTGATCGTC GTGACAAGTA TTGGGATGTG 
TTTCTGGCAC AAGGATAGCC CAGAGTGGCT GACTTGGATC GCGCAAGCCC CTGGTGGGTT 
TGGGTATGCC GGTGTTTTGA CTACGAGTTT AGTCGCTTTG ATGACCCATG TTCAACTGGC 
TGGTAAGGGT GAGACGTACG TGTTTCTTGT ATTACCAGCA TGGAGAGTGG TCAACGCTTA 
TCACATCATC TAACAATAGT GCTGTTGCGA CTAGTAGTAT GTTTGAATGG TTTTTTCTTT 
ATCCTGTCCT ATACTGACCG GTTTCCGCTT TTCCAGTGAC GTATCTGTTC CGTACTGTCG 
GCCAAGTCCT AGGTGTTGCC ATTAGCTCCG CCATTGTCCA ATCAGTCGTC CAAAAAGATC 
TCGTTCGAAC CATTACAGGT CCCGAGGCCC CCTATGTAAG TGGCTATCCC CCTCCTTCGA 
GCGATATTGC GGTGACTTAA TAAAATAAAA AAAAACCCCC CTTTGGAATG GTTTTCATCG 
TAGATCATCT ACCTTATCCG TCACTCAACT TCTGCCATCC AGACCCTTGA ACCGCAATAC 
AAAATCCCAG CCATCCAAGC GTACGACCAC GCTCTTCGCT TTGTGTGGAT CTTTAATCTT 
GTGCTCTCCG TATTTACAGT GTTGACGTTG ATGATGGTGA AGGAAGAGGA GATGCCAGAT 
AGACAGGTTA TGAAAAAGAG GATTGAGCAG ACGTCTGAAT CGGCGTTTGA AGAATTTGAG 
TAGGGACTGG AATACATGGA CGCAAACATT AGACAAGCAT AGACCATTGT AGCGTGTTCC 
TACGAATTGA TAATAGATAC TAGA 

 

Protein sequence

MSSTDGPAAG PATERTQLLS TISTHHNIAG LTPSKFRLVC ASLWCATFLV AFDSTLVSTL 
LSDIGSAFNA STQVSWLGTA YLLSVCCFTP IYGRLSDLIG RRNAHLTGLT LFTLGTFGCA 
IAPSMPFLIV ARFLAGAGGG GVASVSAILM TDLVDLRHRG LFQGWANVTY GVGAGLGGPV 
GGWISDNFGW RLAFHIQVPL LILNAILIYT FVIVPQQEPL APTPSTSSSR SGILDTLPTA 
KPANRPQIWK TKLARIDYLG SFTLALAVSS LLLSMSIKTS ATKPDGSDYA FSDPVIWGLF 
VCSALFAIAF LLVESCYSPE PILPLKLLKR RTPAAVALSS FTMVTVQFSV LYNIPLFFTI 
VQQRSSSSSG AHLLPNSILI GAGSLFVGWI MRRTGRYWWL GVECAVLIVV TSIGMCFWHK 
DSPEWLTWIA QAPGGFGYAG VLTTSLVALM THVQLAGKGE TAVATSMTYL FRTVGQVLGV 
AISSAIVQSV VQKDLVRTIT GPEAPYIIYL IRHSTSAIQT LEPQYKIPAI QAYDHALRFV 
WIFNLVLSVF TVLTLMMVKE EEMPDRQVMK KRIEQTSESA FEEFE