| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB03210 |
|---|
| Symbol | |
|---|
| ID | 3255843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006684 |
|---|
| Strand | - |
|---|
| Start bp | 969801 |
|---|
| End bp | 971657 |
|---|
| Gene Length | 1857 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | 638254966 |
|---|
| Product | alpha-1,2-mannosyltransferase, putative |
|---|
| Protein accession | XP_568899 |
|---|
| Protein GI | 58262978 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG5020] Mannosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00311 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTTAACTATT CAATTTTTTG CTTTCACACC CCCCTTCCAT CCCTAGAGCT ATCCTGGCAA
ACGATTCCAT CTCCAAAATC CTTGGCCAAG ATGATGATCC CTCGTTGGAA ATACATCGCC
ATGGCTGGAG GATTAGTGGT CAGTCCCCAG CTAGTCCATC GTCCAGTGAA AACAGGTGTT
GATATCCCCT ACAGTTCCTC CTCCACGTCA TCCTATCCGT TCATCCTACT TATCGAGAGA
AAACCTCATT CTTGAACCTT TTGCCGCAAC AAGACGGGTG GCGTGAAGGC CAACCACCTC
CCGAATCCTC CATCCCTCCA GTCGTTGGCG ATCTGGCAGA AAATGAGGCC GCTTTGGAGG
GAAGAAGAAG AGCTAACGCA GTCTTTGTCG TTTTGGGTGA GTATCTCTCT ACGATGTCTG
TAAAAGGTTG TCTCGCACAA TACTTACTTA CGACTCGCTG CTTAGCCCGG AATTCGGATT
TGTGGCCGTT CCTCGACTCT ATGCGACAGA TGGAGGATCG ATTCAATCAT TGGGCTAAAT
ATGATTATGT TTTTTTGAAC GAAGAGGTAA ATATTCGTTT TTGGTCGGAA ATAGAGACAA
TGGGCTGAAA TTGAAATTGT TAATTCTAGG ACTTCTCTGA CGAGTTCAAG CGGTACACTC
AATCAATGAC CAAAGCCAAA TGTTACTACG GCAAGATTGA TCCCGAACAT TGGTATCAGC
CTGAATGGTA AGACAGATAT GGTGTCCCCC TTTGTCAAAA TCTCTACTGA TGATTTTCAT
CGTAGGATTG ATGAAGACAA GGCTAGCAAG GCTCGAGAGG AAATGATCAG GAAAAAGGTC
ATTTACGGTC ACTCTGTCCC TTACCGAAAC ATGTGCCGCT TCAATTCTGG CGTACGTACG
ATTCCTGCGA AACTTCAACA AGAGGCTAAC GGCTCACTAG TTCTTCTTCC GACACCCCCT
CCTGGCTAAT TATGATTACT ACTGGCGAAT CGAACCCTCC GTCAAGTTCT TTTGTGATCT
CGGTAAGTCA AAGAGCTCTC TTTGTTAAAC TTGCCTTTGC TGATATCGTG TTACCGCTAG
CCTATGACCC CTTCCTTGTC ATGCAGGATC AAAATAAGGT GTACGGCTTC ACCATTTCCC
TGTTCGAGTA CATCGAGACC ATTCCCACTC TTTGGGACGC TGTCAAAGGT AAGATGATGT
GGCACGAAAT CTGACAGTCG CTGATGCATG AAATGAAGAA TTCATCGGAG AACACCCCGA
TTATCTTCCT GAAGGCAATG CAATGCAATT CCTAAGCGAC GACGGCGGTG AGACCTACAA
CAAGTGCCAC TGTGAGTTTG AATGTATCTG TACTTCAATG TAATGTGTAA CTGATCATTG
GCACAGTCTG GTCCAACTTT GAGATTGGAG ACCTTAACTT TTGGCGATCT CAGCCTTACA
TGGAGTTCTT TGATTTCCTT GACAAGAAAG GTGGATTCTA CTACGAGCGA TGGGGAGATG
CGCCCGTGCA CTCAATCGGT GCCGCGCTCT TCGCTAAGAA GGAGCAGATC CATTTCTTTG
ATGACATTGG CTACAGGCAC GAACCATTCC AGGTAAGGGA ATCCCCTCCG GATTATTCGT
GGCGCTGCTC CTGACAATCA TTGTAGCACT GCCCTCAAGG TGATGCTCAT ACCAGGGGTA
ACTGTTGGTG TGATCAAGCC AATAACTTTG ATTGGGAGTG GTAAGTTGTT GTGTGGATTT
GGCGCCTTTG CATGTAAACA TGCTGATTTT GTCTTCATAG GTACTCTTGC ACTAAGAAAT
ATACAGAAAT GTTCTAATAT GTGTATTTGC ATGAATTTAA CGCGCTTGGC TTATCAG
|
|---|
| Protein sequence | MMIPRWKYIA MAGGLVFLLH VILSVHPTYR EKTSFLNLLP QQDGWREGQP PPESSIPPVV
GDLAENEAAL EGRRRANAVF VVLARNSDLW PFLDSMRQME DRFNHWAKYD YVFLNEEDFS
DEFKRYTQSM TKAKCYYGKI DPEHWYQPEW IDEDKASKAR EEMIRKKVIY GHSVPYRNMC
RFNSGFFFRH PLLANYDYYW RIEPSVKFFC DLAYDPFLVM QDQNKVYGFT ISLFEYIETI
PTLWDAVKEF IGEHPDYLPE GNAMQFLSDD GGETYNKCHF WSNFEIGDLN FWRSQPYMEF
FDFLDKKGGF YYERWGDAPV HSIGAALFAK KEQIHFFDDI GYRHEPFQHC PQGDAHTRGN
CWCDQANNFD WEWYSCTKKY TEMF
|
|---|
| |