Gene CNB03070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB03070 
Symbol 
ID3256083 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand
Start bp928517 
End bp929367 
Gene Length851 bp 
Protein Length213 aa 
Translation table 
GC content46% 
IMG OID638254951 
Producthypothetical protein 
Protein accessionXP_568884 
Protein GI58262948 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0638] 20S proteasome, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.0444499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGTTC AGTTCGATGG CGGTGTTGTC ATCGGTGCGG ACAGTAGGAC AACAACTGGT 
TCCTATATTG TATGTTTCAT TGTGCTGGTG TGCTAGTCGT GTTAGCTTAC ACTCTCTTTA
GGCCAATAGA GTCACAGATA AACTCACTCA TATCCATGAT CGTATTTACT GTTGTCGATC
TGGGTCAGCT GCAGACACGC AAGCTGTTGC CGATGTCGTT CACCAGCATG CTCAGGTTTA
TACCTCTGTC TATGGGTCAC CTCCTACAGT TGCCACTGCT GCCGCACTGT TTGAAAAGTT
ATGTTATGAA AACAAGGATC AGCTCTCGGC AGGCATCATT GTTGCAGGTT GGGACAAGGA
AAATGGCGGA TCAGTTTACA ACATCCCACT AGGAGGCGGA ATGTTCCAAC AACCTTGGGC
CATTGGAGGT ATGGGAAATT ATCTGTTTGA GACGATGCTG CTATTGACCG AACGAATATC
AGGTTCCGGC TCAACATATG TTTATGGTTA TTGCGACGCT ACCTATCAAG AAGGATGGTC
AAAAGAAGAA ACTGTCAAGT TTGTGAAGAA TAGTAAGGCC CTTCTCTAGT GTTTGGACAT
GTTGCTCTGA CAGTGACTGA TTTAATGCAT GATTAGCTCT TTCTCTTGCG ATGGCGCGAG
ACGGTTCTTC TGGTGGTTGT ATTCGGATGT GTGTCATCAC CCAAGACAAA GTGGAACGTC
ACTTTATCCC TGGAAATGAA TTGCCTAGGT TTTGGGAAGG CAAGGAGGTG TTGGGCAGTA
TGAATGCAGG AAGCACGGCT GTGGTGGCAT AAAGTGAACG GTAGAAGTAT TGTATGCATA
TGATCTCACG T
 
Protein sequence
MAVQFDGGVV IGADSRTTTG SYIANRVTDK LTHIHDRIYC CRSGSAADTQ AVADVVHQHA 
QVYTSVYGSP PTVATAAALF EKLCYENKDQ LSAGIIVAGW DKENGGSVYN IPLGGGMFQQ
PWAIGGSGST YVYGYCDATY QEGWSKEETV KFVKNTLSLA MARDGSSGGC IRMCVITQDK
VERHFIPGNE LPRFWEGKEV LGSMNAGSTA VVA