Gene CNB02460 details

Gene Information

• Locus tag: CNB02460
• ID: 3255950
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006684
• Strand: +
• Start bp: 713149
• End bp: 715420
• Gene Length: 2272 bp
• Protein Length: 558 aa
• GC content: 49%
• IMG OID: 638254897
• Product: calcium channel, putative
• Protein accession: XP_569171
• Protein GI: 58263531

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.41588
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAAATAACAT ACAAAAAAAA AAACAAAAGA GTCTGCACTG CAGGACAGCA CAGCGACTAT 
TCACGATATA TTCACGACCA ACGACCATCT CCCAAGAAAG AGCGACGAAC ACGACCCATT 
CAATGAGGTT ATAGCAATCA CAGCCCGCAG ACGATAGCGA ACAGGCAATG CCAGCGAGAG 
AGGTGTATTT CAAAAGGCCA GCTACCAGAT GCCAACTGGA AGAAATCCGC ACAAGACATG 
ATGGTCAGCA GCGAATTATG CAACTGGACT GCGAAAAGGG CTGCAGCAAG GGAACACAGC 
CGCGCCAGCG CTTAAACCGA AGATACAAGT CTCCAGACTT GATCAATATC TCAGTTATGG 
TCGTACTGCT TTGTATACTG TCCATGCTAT CATCGGCGGT TGCGCAAACA GCAACCGGCT 
CGTCATCTTC AAAAGCCACT GCAACCTCTA TTTTACCACG CCAGGCTTTT CCCGCAACCG 
TCTCTCTGCC ACCACTTAAC AGTTCTCATC CTCTTCTCCA GCTGGCACTC CCATCGACAT 
CGTCCCTCTA CCTGACGTTT TCAGTATGTT CACTAACATC CAATACGACG ATTCTCCCAA 
CTGTTTTGAT CTCTACTTCC TCACCGGCCT CATTCAATCT CGGTTCAAAA CCGATCAGAG 
ACGCTTCTGC AGGCGGTGTA CCCACCTCTT CCGGGGGTAA GGGGTATAAT TACAAAAGTG 
GGAAGAATGG AGCTACATGG GAGTTAGCAT GGAGTAGCGG ATTTGGGAAC TGGACTCTGA 
ATGGGACCAG TGAAACTCAA GTTCATCTTT TGCTGGGACT AGGTTTGGGA TCTGATGGCT 
CGACGTTGAA TACGACCGGT GTGGGTAATG GCAACGTTGT AGTGCAGATG GGGGCTTCAA 
CCAGTGGTAG GTAGTCTCTT TTTTTGGGTG AGTAGGTGGA GACTTTCGAG TTAAAACGTG 
AATAGGCCCC TTGCATGCGT TATCGGCGGT ATATCCTCGA CTTGGAGATA CGACGTCTAC 
TTCCGCTTTA ATATTCTCCC CGCTTCTCTA CTCCTCCCCC CAGCCTGAAC CATCCTACCC 
GAACTATACA CTTCCAGGTG CCCAGCTAGC CTTTCCAGAC TTTTCATACT CTGAGCCACT 
GAACTCAAGT CTGTCGAGCA ACTTGACTCT CATCGTGGTA CCCACAAATT CTTCTCCTAC 
TTCCACTGGT TTGGACAACT CTATATGCGC CATAAATGCT GCTTCTGCGA ACAGCAGTGT 
CTCAGGAGCG AATAACACTA TTCTACAAAG CTTTCAGCCG GAATGGATGA CTGTTGGCGA 
CGAGCAAGGA TTTAGGAGTT ATTGGGTATT GGGCGACTTG ACTGAGCAAG GAAATTATAC 
AGCTTGGCTG AGCGATGATA ACGGCGTGTT GAGCCAGCCT GCTTGGTTTG CGACCAAACC 
AGGTACGTCA ATTTATTTCT TTGGAAGCGG GGTGTCAAAA AGTTCATGCC CACGAACTGC 
AAGCTGACTG CAGTCATTAT AGCCGATTTT CCGTGTCAGT TGGTCCTGCC GAATGATGTA 
TGCCCCAACC TGGGCTACTC TGCGCCTCTT GATGCAAATT CTACGACTGT CACTTCTCCG 
TCAGGAGAGA CAATCTCGTC AACATCGCCT ATCCAGACAC TCCCCGACGA ACTTTTAGAA 
TTGATCATTC AAAACCTCGA GGCATTTTCC ACCACTTTAT TGTCTCACGC ATGTGGAAGG 
GATCTATTTT CACATGTGTC ATCATGCCTA GACTGCTATT CTGCTTACAG AGACTGGTTG 
TGCCGGATAG TGGTCCCGCA ATGTGGTGAC GCGAACGGTA CCACGAGTGC TACAGCCATC 
GAGACCGCCA CAAGCACAAG CACAAGCAGT GGCACTTTTC CCACACCATC GACTGTCCTT 
CGTACGCCAT CTTCACCTCG TAATCCGTCA CTTCCTATCC CGGCATACTC GTATTATGAA 
CTACTCCCCT GCATGTCGAC CTGTAACAGG GCCGATCGCT CATGCCCGGT AACCATGGGC 
ATCAGGTGCC CGAAACGCAA GGTGAATGCC GCAAAGAGCT ATGCGTTTGT GGGAGACGAC 
CATAGTTATG GTGACGGGAG CGCAGAGCAA GGGGTCACCG CACAAGATCG CTGGGGAAAT 
AGATGGTGTA ACGGATAGAG TAGAGGTGTG ATTAAAGCCA TGTTATGTTG GTTGTACAGT 
AGTATGTATT GCATAATAGG ATATGCATGT GGGATTCTTG CATGCATACA CA 

 

Protein sequence

MPAREVYFKR PATRCQLEEI RTRHDGQQRI MQLDCEKGCS KGTQPRQRLN RRYKSPDLIN 
ISVMVVLLCI LSMLSSAVAQ TATGSSSSKA TATSILPRQA FPATVSLPPL NSSHPLLQLA 
LPSTSSLYLT FSVCSLTSNT TILPTVLIST SSPASFNLGS KPIRDASAGG VPTSSGGKGY 
NYKSGKNGAT WELAWSSGFG NWTLNGTSET QVHLLLGLGL GSDGSTLNTT GVGNGNVVPL 
NSSLSSNLTL IVVPTNSSPT STGLDNSICA INAASANSSV SGANNTILQS FQPEWMTVGD 
EQGFRSYWVL GDLTEQGNYT AWLSDDNGVL SQPAWFATKP ADFPCQLVLP NDVCPNLGYS 
APLDANSTTV TSPSGETISS TSPIQTLPDE LLELIIQNLE AFSTTLLSHA CGRDLFSHVS 
SCLDCYSAYR DWLCRIVVPQ CGDANGTTSA TAIETATSTS TSSGTFPTPS TVLRTPSSPR 
NPSLPIPAYS YYELLPCMST CNRADRSCPV TMGIRCPKRK VNAAKSYAFV GDDHSYGDGS 
AEQGVTAQDR WGNRWCNG