| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB02360 |
|---|
| Symbol | |
|---|
| ID | 3255988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006684 |
|---|
| Strand | + |
|---|
| Start bp | 682197 |
|---|
| End bp | 683090 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | 638254887 |
|---|
| Product | ribosomal L10 protein, putative |
|---|
| Protein accession | XP_569162 |
|---|
| Protein GI | 58263504 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0197] Ribosomal protein L16/L10E |
|---|
| TIGRFAM ID | [TIGR00279] ribosomal protein L10.e |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.00987477 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AGTTATTCAC AATGGGTCGT CGTCCCGCTC GTTGCTACCG ATACTGCAAG AACAAGCCGT
GAGTGTCTCT GCTATTTATG CACCCAACCA AAGTAAATGC TTATAAATCG TCCAGTTTCC
CCAAGTCGAG GTACAACCGT GGTGTCCCCG ACCCCAAGAT CAGGATCTAC GATCTTGGTC
GAAAGAAGGC TTCTGTCGAC GACTTCCCCT TCTGTTGCCA CCTTGTTTCC GACGAGTACG
AGCAGCTTTC TTCCGAAGCT CTCGAAGCCG CCCGTATCTG TGCCAACAAG TACATTGTCA
AGAACGCCGG TAAGGAAGCC TTCCACATGC GTGTCAGGGT CCACCCCTTC CACGTTATCA
GGATCAACAA GATGTTGTCC TGTGCCGGTG CGGATAGGTT GCAACAGGGT ATGCGAGGTG
CTTGGGGTAA GCCTTACGGC TCCGTCGCCC GTGTCAACAT GTGCGTTTCC GAATTTCGCA
ATGTCTTGGC AACTTACTGA CGTTCATATA GCGGTCAGGT CATCATGTCC ATCCGATGCC
GAGACAGCAA CAAGGCCGTC ATCATTGAGG CCCTCCGACG TGCTCGATAC AAGTTCCCCG
GACGACAGAA GATCATCGTC TCCAAGAAGT GGGGTTTCAC TCCTCTCGAC CGTGCCGAAT
ACGAGGCCCT CAAGGCCAAC AAGCAGGTCA TCAACGACGG TGCCTACGTC CAGGTTAGTA
TCGAAATGCT AAAATTGTTT GTCCTGAAGC TAATGTCGGG AAACAGTTCC TCAAGCCCAA
GGGCCCCCTC CTCAAGAACC TCAGGACTGC GGAGCGTGCT TAAAGGGTTG TCGAATTGTA
GGATTAGTTG GTGCCTCTCG GGCGGTGCTA TGTATCGTCT CTGAGTTCAT ATCT
|
|---|
| Protein sequence | MGRRPARCYR YCKNKPFPKS RYNRGVPDPK IRIYDLGRKK ASVDDFPFCC HLVSDEYEQL
SSEALEAARI CANKYIVKNA GKEAFHMRVR VHPFHVIRIN KMLSCAGADR LQQGMRGAWG
KPYGSVARVN IGQVIMSIRC RDSNKAVIIE ALRRARYKFP GRQKIIVSKK WGFTPLDRAE
YEALKANKQV INDGAYVQFL KPKGPLLKNL RTAERA
|
|---|
| |