Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNB02170 |
Symbol | |
ID | 3255622 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006684 |
Strand | + |
Start bp | 631282 |
End bp | 634023 |
Gene Length | 2742 bp |
Protein Length | 513 aa |
Translation table | |
GC content | 47% |
IMG OID | 638254868 |
Product | conserved hypothetical protein |
Protein accession | XP_569146 |
Protein GI | 58263472 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.922145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CTGATGATTG ATAATTAATA ATGGAATTCC GGAATATCGG TGATCTCAAC CGAGCGAGCG AGTGACGCTT ATTTTAAAAA TTTGGTACTG ATCTAACGGG GGGGAGCTGA TCGAAACGAT CCTCCGTTTG AGGCACAACC CCGCGCTCAG AAATGGTGAG TCAGCTTTCC TCGGCGTCGC GCTCGTTCGG CGGTGGCTCC TTCGTCGTGC TTTCGTTCGA TTTCGCCAGT GCTCCTTTTC TCAACATCGA GATCCACAGT ATATAAGCAG CACTATGACT TCATGCAACA GGGAGCATCA CTGCGCTCTT TCGACCCAAA GGAACTCTAC AAGACCAACA ACTCGCTATG TCGGACAATG CGATCCCCAC TGACTTCACT AAAGGGCCCA GTCATGTTCA CCCCCCAATA GACAAAAAAA GTATGACAGC TTCACAGAAT GAAGTTGAGA AAGGTTCACA GCACAATGTG GATATTCAAG ACGCTCCTCA CGGATTGGCG ACTCTTGGAC AAGGTAGAAA AAATGTCTTG CTTTTGATAT TCTCAATCGC TACGTTTGTG GACGTTTGCA AGTAAGTCGT AGCGAGTTTT TTATATGGAG TTCATCCGAT ATGGACGTTC GCTGAATTTG GCATTCCAGC GTATCTGGCG TTGCAGTGGC TGTAGCCCAA ATTTCTCAAG ATATCAACCT AGGCTATTCT CAGATAGTTT GGATCATCAC GTCCTATTCC CTTTGCTTCG CTGCTTGTCT TCTACTGGCT GGACGTCTAT CGGACCTCTT TCCTGCTTCC ATAGTCTTTG AGGGAGGTTT CTTTGTTTTG GGAATATTCA GTTTGATTGT CTCTTTCGTA ACCTCTAACA AGTTAGTATC TTTCTATGCG AGTACTGGAG GACCGCTGAA GTCTATCCTA GGTATGGTTT CCTGATCTTA CGAGGATTAG GTGGAATTGC TGGAGCAATG AGTAAGTGGA TGTTGATGGG CCTCACTATG CTCCGAGAAG TTGGGCTGAG CTGATTTTTG TGCAGCTATT CCATCTTCGT AGTGCGTAAT ACGTTCTCAT ACGTTGGCCC TTAACCATCC GACGTTAACA GCTCGTTACA GCCACCTTAC TGTTCACATG TTCCCCGATC CGGACGAGAA ACAGAAGAAA CTAGCTTTAC TTAGTCTTTC AGGTGCCATT GGTAACGTCT TGGGGCTGTG AGTGATATGT TGACCCCTCT TTAACTCCTG CTGATATCAA TACGAACAGC GTCCTTGCCG GCATTTGCAT GTTGGCGAAC TATAAATGGT TCTTCCGTGT CCTCGCCATC ATTTGTAGGT ACTAGCGGGT AGTGCTGCCA GGTTTCCTTT CAATTGACAT CACACTCAAG GTGTCGCATT CACCGCGATC TGCTTTCTCC TTCTACCCTT AACTCACTCG GCATACAAAT CAGAGGAAGG GCTTCCTCGT TGGAAGAGAC TCGACCTCAT CGGTGTGGGC TTTATGATGG CCTGTCTCAT TTGCTTTATT CTTTCTCTTA CGCAGGGACC GATCGATGGA TGGGGGTCTG CTTCGTTCAT TGCTCCTTTC GTTCTGAGCT TCCCTCTTGC TATTGGCTTT TTCTTCTGGG GTCAGTAATA AATCAAGTCA TTTGCTAAAC GGTTTGTTGA TCAGTCTTGT AGAATCGAAA ATTCCCGCCA AATCTGCTGT CCTGCCTAGC TCGGTGTGGA AGATCACGAA CATTGTGATC ACAAGCCTCG CAATTGGCAT TGCCTGTGGG TGATAGTGCT CCAGTCTGAG TAATGACAAC TGCTAACAGT TTTGGCCGCA AGTCCCTTTT TGGGCGACGT CACAACTCAT GTATGCAACC TACTTCCAAG AAGTTATGGG ATGGACTCCA AGTGAGTAGC TTATGCAAGC ATGAACACTT TTCATCCTGG GTATGATTGA CTAAGGTTTG CGTCTCAGTC AAAGTCGCGG CTGCCATGCT TCCCCAAGGT GTCACTGGCC TTATTGTTGG TGGTCTTGCC CAACAAATCC CACAAATAAT TACCAAGCCC AAATTTATCC TGCCTTTGGG TAGTCTATGT GAGTAAATTT GGCAACGTTA CCTGTAATTT TTATTAACTC ATATTTCCCC AGTCATCGTC GCCGCCGAGC TTCTCCAGAT CTTTTCCAAT GGCGGGCATG GCAAAGATTA CTGGCGATAC TGTTTCCCTG CCTTTATACT TGGTAGCGCC GGCGCTATCT TGACCTATTT CTGCACTTCG TAAGTTCGTA TATGAATGAG GCAGACAAAT GCTGATAATG TTCTGTCACA GCATCAACTT GATTACATAC TGTCCGCCAG AGATGGCTGG CGTAGCTGGT GCCTGGGTTC AGGTCATGGT ATGTCCCCAC GCTTGTCTAT GTCCGCCCAG ACTAATACTT CCATAGGCTC AAGTTGCTTC TGCCATCACA CTCGCGGTCC AAGCGTCATT TGAAGGCGAC GGAGTTGCTG ATTGGAACAT GGCAGCCCGT CGATCATTCT ACTTCCAAAT TGCTTGGACG GCAGTGTTGT GTATCCAGTT TGTTATTTTC TTCAAGAAGC CAAGCTCTCC GGAAGAGGCG CACGAGGCGA CTAGGCGAAG GATTGCGGAA AGCGGAAAGG ATGCGGGAGT ATAAGATAAC ATTCTATTTA AAGCACTTGT GTCGTTTGAT TTCGGGCATG TAGTAGGTCG ATGATGGTTG ATTTTTGTAG AATAGTGCCA GCGTATAAAG TA
|
Protein sequence | MTASQNEVEK GSQHNVDIQD APHGLATLGQ GRKNVLLLIF SIATFVDVCN VSGVAVAVAQ ISQDINLGYS QIVWIITSYS LCFAACLLLA GRLSDLFPAS IVFEGGFFVL GIFSLIVSFV TSNKYGFLIL RGLGGIAGAM TIPSSYHLTV HMFPDPDEKQ KKLALLSLSG AIGNVLGLVL AGICMLANYK WFFRVLAIIC VAFTAICFLL LPLTHSAYKS EEGLPRWKRL DLIGVGFMMA CLICFILSLT QGPIDGWGSA SFIAPFVLSF PLAIGFFFWE SKIPAKSAVL PSSVWKITNI VITSLAIGIA FPFWATSQLM YATYFQEVMG WTPIKVAAAM LPQGVTGLIV GGLAQQIPQI ITKPKFILPL GSLFIVAAEL LQIFSNGGHG KDYWRYCFPA FILGSAGAIL TYFCTSINLI TYCPPEMAGV AGAWVQVMAQ VASAITLAVQ ASFEGDGVAD WNMAARRSFY FQIAWTAVLC IQFVIFFKKP SSPEEAHEAT RRRIAESGKD AGV
|
| |