| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB02100 |
|---|
| Symbol | |
|---|
| ID | 3255657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006684 |
|---|
| Strand | - |
|---|
| Start bp | 610092 |
|---|
| End bp | 612854 |
|---|
| Gene Length | 2763 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | |
|---|
| GC content | 45% |
|---|
| IMG OID | 638254860 |
|---|
| Product | expressed protein |
|---|
| Protein accession | XP_569138 |
|---|
| Protein GI | 58263456 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.320661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CACACTACAA TGGTCACTGC AAACTGCAAC GCTGCATGCC GAGACGCTTA TCGAGCGTGG
AGATGGAGAT CCCCGATCTC GACCATACGG CGGTTCACCG ATCTCGGCAA TCCGCGAAGC
ACTCGGGCAT TGTCAGATGG GAATATGAGG ATAACATCAT ATCGCAGAAA TCCACCACAG
CCTTAAAAGC GCTGAAGAAA GCAACATTAC AAACAGGAAG GAAGGATATA AAAGCCCATG
TATGTAGTGT CTTTCAACGT TCCCACATAC ACCCCAATCG CGTAACATTA TGTCTGACGA
TTCAACCTTG GCTGACATTC ATCCTATCGA CGCTAGCAAG CTAGAGAAAG CTGAATCTGA
ACACAATCAG TTACACCAAA ATGCGAGCCA TCATCACTCC GAGAACACGC TTGCCAACCT
GAGCCAGGCT AGGAAGAACT TCTTAGTGCT TATCTTCTCC ATAGCAACGT TTGTCGACAT
CTGCAAGTGA GTTCTAATAT CAGATGAATA TGTCAGCACT GACATGAGCT CGTCCTATTC
AATCAGTGTT TCTGGAGTGG CCGTAGCGGT TGCCCAAATT TCAACTGACA TCAAACTCGA
CTACTCTCAA ATCGTTTGGA TCGTCACATC TTATTCCCTG TGTTTTGCTG CTCTTTTGCT
CTTTGCCGGG CGACTGGCAG ATTTGTTCCC AGCCCAAATA GTGTTCGAGG GAGGTTTTAT
TATGCTAGGA ATATTGAGTT TAGTCACCTC TTTTGTGACT TCTAATAAGT GGGTCCATGC
TTTGTCATAA CCTTATGCGA GGCAATGTAC TGAACATTTT TTTAGGTATG GGTTTTTGAT
TTTACGTGGC CTTGGAGGTA TTGCCGGTGC CATGAGTGAG TTATTTCCCC AGGATAACTA
GACTGATGCT CACTTCTACA AAAGCAATCC CTTCAGGCTA GTGAGCATAT GTGGCGACCT
TTAACGGCTG GGACTGACAT TAATGGCATA GTCACCTCAC GGTCCATCTC TTCCCTGAAC
CTGCTGAGCA ACAAGCCAAA TTAGCCCTTT TAGGATTAGC AGGTGCTATT GGAAATGTAC
TCGGATTGTA AGTATCAAAT GATTGGCAAG AAGAGGTGCT CACCCAATGC AGGGTTCTAG
CAGGTGTGTG TATGTTAGCT AGTTACAAAT GGTTCTTTAG GGTCATTGCC ATCATCTGTA
TGTTTTCAAT CCCGATATTT CCAGGAGAAT TGCTAAGATG ATTGCGAAGG TATTGTCTTC
ACTATCATTT GCGTCTTGGT TTTGCCTTTC ACAGGGTCAA CGTACAGCCC TGACCCTAAT
ATGCCTCGTT GGAAGAGGCT TGACTTTATG GGTGTCGGAC TTATGATGAC CTCTCTTATC
TGCTTTATTC TTGCCTTGAC TCAAGGCCCA ATTGATGGCT GGGGTTCCGC CTCATTCATT
GCTCCATTCA TCCTGAGTTT CCCTCTTGCA ATCGGCTTCT TTTTCTGGGG TGCGTAAATC
CCTCGCTATA CTCGGCATCT CTTAAATGGG AAGTTTTGCT GATCATGAGC AATCGCAGAA
TCTAAGATTC CAGCCAAGAG CGCCGTATTA CCCAGTTCAG TCTGGAAGAT CACCAATATT
GTGATCTCCA GCTTGGCGAT AGGTATCCCT TGTACGTGGC CTTCCTACAG ACCGCGGAAC
CTCTCTGACA TTTTGCCTGA AAGTTCCGTT CTGGGCGACT TCTCAGCTTC TGTACTCTAC
TTACTTCCAA GAAGTATTTG GCTGGACCCC AAGTGAGTTT TATGACTCAT AATTTTTTCG
AAACCGATTG CTGAACCCCA TTATGTCAGT CAAAGTCGCG GCGGCAATGG TACCCCAGGG
AGTTACTGCA TTGATAATTG GCGCTTCAGC GCAGGTCATC CCCCAAATCA TCACAAAGCC
GCGAATCACG CTTCCCATCG GTGGAGCTCG TGAGTATTAG AGTTTCAAAG GAAAAGTCAT
CTCCTAAACA AATGGTAGTG GTGATTATCG CCGAGATTCT GCAAGTGTTC TCTAACGGAG
GACATGGTAC AGATTACTGG AGGTATTGTT TCCCTGCATT TGTGCTCGGC AGCGCAGGAG
CGGTTATGAC TTTCTTTGCC TCAGCGTAAG CAGAAAAGCA CAGAATGCGG GAATATATAA
ATTGACCATC TTTTAATAGT ATCAATCTCA TCTCCTACTG TCCTCCAGAA ATGGCTGGTG
TTGCAGGTGC TTGGACCCAA GTGATCGTGA GTTTCTATCA GTTTTATTTG TGTCATAAAC
CAGGCTGATA AACAATATCT CCAGTCTCAA ATCGCGGGTG CTATTACACT CGCAGTTCAG
GCTTCTTTCG AAGGCGACGG TGTTGCTGAC TGGAACAAGG CTGGCCGCCG ATCCTTCTAT
TTCCAAATTG CTTGGACAGC TATATTGTTA CTCCAGTTTT TAATTTTCTA CAAGACGCCA
GGAACTCCCG ACGAAGAACA CGAGGCCGCT AGGAAGAGAA TCAAGGAGAG TGGGAAGGAT
GCTGGTGTGT GATTGTGAAC AATGCTTTAG AGTTGAGTCA AGCAAAACTG GGAGAAGCAC
CTCTCTGTAC AGCACATTGT CGATATTAAG TATAACTGTG TATAGATAAG AAACAAATTG
AATAGTCAAC AGTAAAGTGA ATATTTATAT ATAGATGCAG AAGGATACCG ACCACGAATT
TACTGTATAA TATAATATAA TATAATCATA GACATACTTT ACAACCTTAC ACAGCTTATG
AAC
|
|---|
| Protein sequence | MSDDSTLADI HPIDASKLEK AESEHNQLHQ NASHHHSENT LANLSQARKN FLVLIFSIAT
FVDICNVSGV AVAVAQISTD IKLDYSQIVW IVTSYSLCFA ALLLFAGRLA DLFPAQIVFE
GGFIMLGILS LVTSFVTSNK YGFLILRGLG GIAGAMTIPS GYHLTVHLFP EPAEQQAKLA
LLGLAGAIGN VLGLVLAGVC MLASYKWFFR VIAIICIVFT IICVLVLPFT GSTYSPDPNM
PRWKRLDFMG VGLMMTSLIC FILALTQGPI DGWGSASFIA PFILSFPLAI GFFFWESKIP
AKSAVLPSSV WKITNIVISS LAIGIPFPFW ATSQLLYSTY FQEVFGWTPI KVAAAMVPQG
VTALIIGASA QVIPQIITKP RITLPIGGAL VIIAEILQVF SNGGHGTDYW RYCFPAFVLG
SAGAVMTFFA SAINLISYCP PEMAGVAGAW TQVISQIAGA ITLAVQASFE GDGVADWNKA
GRRSFYFQIA WTAILLLQFL IFYKTPGTPD EEHEAARKRI KESGKDAGV
|
|---|
| |